RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 MED23Q9ULK4 1368 aa19.62■□□□□ 0.73
ACTN4-211ENST00000589528 CTSWP56202 376 aa19.62■□□□□ 0.73
ACTN4-211ENST00000589528 NBPF9Q3BBW0 867 aa19.62■□□□□ 0.73
ACTN4-211ENST00000589528 CCDC30Q5VVM6 783 aa19.62■□□□□ 0.73
ACTN4-211ENST00000589528 PRAMEF18Q5VWM3 479 aa19.62■□□□□ 0.73
ACTN4-211ENST00000589528 MYO3BQ8WXR4 1341 aa19.61■□□□□ 0.73
ACTN4-211ENST00000589528 MKRN3Q13064 507 aaKnown RBP19.61■□□□□ 0.73
ACTN4-211ENST00000589528 ZNF296Q8WUU4 475 aaPredicted RBP19.61■□□□□ 0.73
ACTN4-211ENST00000589528 MAP3K2Q9Y2U5 619 aa19.61■□□□□ 0.73
ACTN4-211ENST00000589528 ZNF853P0CG23 659 aa19.6■□□□□ 0.73
ACTN4-211ENST00000589528 NEXNQ0ZGT2 675 aa19.6■□□□□ 0.73
ACTN4-211ENST00000589528 PRPF38BQ5VTL8 546 aaKnown RBP19.6■□□□□ 0.73
ACTN4-211ENST00000589528 BSDC1Q9NW68 430 aaPredicted RBP19.6■□□□□ 0.73
ACTN4-211ENST00000589528 CCT4P50991 539 aaKnown RBP19.59■□□□□ 0.73
ACTN4-211ENST00000589528 SREBF2Q12772 1141 aa19.59■□□□□ 0.73
ACTN4-211ENST00000589528 ARMC9Q7Z3E5 817 aa19.59■□□□□ 0.73
ACTN4-211ENST00000589528 MINPP1Q9UNW1 487 aa19.59■□□□□ 0.73
ACTN4-211ENST00000589528 WNT10BO00744 389 aa19.58■□□□□ 0.72
ACTN4-211ENST00000589528 APAF1O14727 1248 aa19.58■□□□□ 0.72
ACTN4-211ENST00000589528 STRIP1Q5VSL9 837 aa19.58■□□□□ 0.72
ACTN4-211ENST00000589528 MXD3Q9BW11 206 aa19.58■□□□□ 0.72
ACTN4-211ENST00000589528 COA1Q9GZY4 146 aa19.58■□□□□ 0.72
ACTN4-211ENST00000589528 GREM2Q9H772 168 aa19.58■□□□□ 0.72
ACTN4-211ENST00000589528 GPR25O00155 361 aa19.57■□□□□ 0.72
ACTN4-211ENST00000589528 SASH1O94885 1247 aa19.57■□□□□ 0.72
ACTN4-211ENST00000589528 IGHMBP2P38935 993 aaKnown RBP19.57■□□□□ 0.72
ACTN4-211ENST00000589528 PRKG1Q13976 671 aa19.57■□□□□ 0.72
ACTN4-211ENST00000589528 DACT2Q5SW24 774 aa19.57■□□□□ 0.72
ACTN4-211ENST00000589528 KSR2Q6VAB6 950 aa19.57■□□□□ 0.72
ACTN4-211ENST00000589528 C8orf58Q8NAV2 365 aa19.57■□□□□ 0.72
ACTN4-211ENST00000589528 TTLL11Q8NHH1 800 aa19.57■□□□□ 0.72
ACTN4-211ENST00000589528 STK31Q9BXU1 1019 aa19.57■□□□□ 0.72
ACTN4-211ENST00000589528 ZNF646O15015 1829 aaPredicted RBP19.57■□□□□ 0.72
ACTN4-211ENST00000589528 PI4KAP2A4QPH2 592 aa19.56■□□□□ 0.72
ACTN4-211ENST00000589528 WTIPA6NIX2 430 aaPredicted RBP19.56■□□□□ 0.72
ACTN4-211ENST00000589528 TM4SF4P48230 202 aa19.56■□□□□ 0.72
ACTN4-211ENST00000589528 MMP14P50281 582 aa19.56■□□□□ 0.72
ACTN4-211ENST00000589528 APOBEC3FQ8IUX4 373 aaKnown RBP19.56■□□□□ 0.72
ACTN4-211ENST00000589528 PI4KAP1Q8N8J0 262 aa19.56■□□□□ 0.72
ACTN4-211ENST00000589528 TTLL5Q6EMB2 1281 aa19.55■□□□□ 0.72
ACTN4-211ENST00000589528 LEMD3Q9Y2U8 911 aa19.55■□□□□ 0.72
ACTN4-211ENST00000589528 FKTNO75072 461 aa19.54■□□□□ 0.72
ACTN4-211ENST00000589528 IGKV5-2P06315 115 aa19.54■□□□□ 0.72
ACTN4-211ENST00000589528 KCNJ4P48050 445 aa19.54■□□□□ 0.72
ACTN4-211ENST00000589528 FBXO46Q6PJ61 603 aaPredicted RBP19.54■□□□□ 0.72
ACTN4-211ENST00000589528 KIAA0825Q8IV33 1275 aa19.54■□□□□ 0.72
ACTN4-211ENST00000589528 MPHOSPH8Q99549 860 aa19.54■□□□□ 0.72
ACTN4-211ENST00000589528 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.54■□□□□ 0.72
ACTN4-211ENST00000589528 PTPN12Q05209 780 aaKnown RBP19.53■□□□□ 0.72
ACTN4-211ENST00000589528 CWF19L2Q2TBE0 894 aaKnown RBP19.53■□□□□ 0.72
ACTN4-211ENST00000589528 NOM1Q5C9Z4 860 aaKnown RBP19.53■□□□□ 0.72
ACTN4-211ENST00000589528 UBE3BQ7Z3V4 1068 aa19.53■□□□□ 0.72
ACTN4-211ENST00000589528 ANKRD2Q9GZV1 360 aa19.53■□□□□ 0.72
ACTN4-211ENST00000589528 ANGEL1Q9UNK9 670 aaKnown RBP19.53■□□□□ 0.72
ACTN4-211ENST00000589528 ZNF804BA4D1E1 1349 aa19.52■□□□□ 0.72
ACTN4-211ENST00000589528 ALDH1A1P00352 501 aa19.52■□□□□ 0.72
ACTN4-211ENST00000589528 TXNRD3Q86VQ6 643 aa19.52■□□□□ 0.72
ACTN4-211ENST00000589528 ECM29Q5VYK3 1845 aa19.51■□□□□ 0.71
ACTN4-211ENST00000589528 NEURL1BA8MQ27 555 aa19.51■□□□□ 0.71
ACTN4-211ENST00000589528 ITGA6P23229 1130 aa19.51■□□□□ 0.71
ACTN4-211ENST00000589528 GTF2IP78347 998 aa19.51■□□□□ 0.71
ACTN4-211ENST00000589528 TSPYL6Q8N831 410 aa19.51■□□□□ 0.71
ACTN4-211ENST00000589528 COL1A1P02452 1464 aaPredicted RBP19.5■□□□□ 0.71
ACTN4-211ENST00000589528 SPRYD7Q5W111 196 aa19.5■□□□□ 0.71
ACTN4-211ENST00000589528 SLC10A4Q96EP9 437 aa19.5■□□□□ 0.71
ACTN4-211ENST00000589528 DLGAP5Q15398 846 aa19.49■□□□□ 0.71
ACTN4-211ENST00000589528 CFHR5Q9BXR6 569 aa19.49■□□□□ 0.71
ACTN4-211ENST00000589528 MANSC4A6NHS7 340 aaPredicted RBP19.48■□□□□ 0.71
ACTN4-211ENST00000589528 MYO1BO43795 1136 aa19.48■□□□□ 0.71
ACTN4-211ENST00000589528 KLRK1P26718 216 aa19.48■□□□□ 0.71
ACTN4-211ENST00000589528 TSR2Q969E8 191 aaKnown RBP19.48■□□□□ 0.71
ACTN4-211ENST00000589528 DEFB129Q9H1M3 183 aa19.48■□□□□ 0.71
ACTN4-211ENST00000589528 MYH16Q9H6N6 1097 aa19.48■□□□□ 0.71
ACTN4-211ENST00000589528 PRKRIP1Q9H875 184 aaPredicted RBP19.48■□□□□ 0.71
ACTN4-211ENST00000589528 CACNA1FO60840 1977 aa19.47■□□□□ 0.71
ACTN4-211ENST00000589528 H7C1W4 665 aa19.47■□□□□ 0.71
ACTN4-211ENST00000589528 PPP1R12BO60237 982 aaPredicted RBP19.47■□□□□ 0.71
ACTN4-211ENST00000589528 INHBEP58166 350 aa19.47■□□□□ 0.71
ACTN4-211ENST00000589528 LDLRAD1Q5T700 205 aa19.47■□□□□ 0.71
ACTN4-211ENST00000589528 R3HDMLQ9H3Y0 253 aa19.47■□□□□ 0.71
ACTN4-211ENST00000589528 FZD1Q9UP38 647 aa19.47■□□□□ 0.71
ACTN4-211ENST00000589528 TRIM17Q9Y577 477 aa19.47■□□□□ 0.71
ACTN4-211ENST00000589528 SLC4A2P04920 1241 aa19.46■□□□□ 0.71
ACTN4-211ENST00000589528 CHRNDQ07001 517 aa19.46■□□□□ 0.71
ACTN4-211ENST00000589528 IFNL1Q8IU54 200 aa19.46■□□□□ 0.71
ACTN4-211ENST00000589528 GCC1Q96CN9 775 aa19.46■□□□□ 0.71
ACTN4-211ENST00000589528 ANKRD18BA2A2Z9 1011 aa19.45■□□□□ 0.7
ACTN4-211ENST00000589528 F8W031 263 aaPredicted RBP19.45■□□□□ 0.7
ACTN4-211ENST00000589528 ZBTB48P10074 688 aaPredicted RBP19.45■□□□□ 0.7
ACTN4-211ENST00000589528 GCKRQ14397 625 aa19.45■□□□□ 0.7
ACTN4-211ENST00000589528 TWISTNBQ3B726 338 aaPredicted RBP19.45■□□□□ 0.7
ACTN4-211ENST00000589528 PLA2G12BQ9BX93 195 aa19.45■□□□□ 0.7
ACTN4-211ENST00000589528 CD209Q9NNX6 404 aa19.45■□□□□ 0.7
ACTN4-211ENST00000589528 PPP2R3BQ9Y5P8 575 aa19.45■□□□□ 0.7
ACTN4-211ENST00000589528 FKBP5Q13451 457 aaPredicted RBP19.44■□□□□ 0.7
ACTN4-211ENST00000589528 SUPT20HL1Q3ZLR7 823 aa19.44■□□□□ 0.7
ACTN4-211ENST00000589528 OTUD7BQ6GQQ9 843 aa19.44■□□□□ 0.7
ACTN4-211ENST00000589528 ZNF804AQ7Z570 1209 aa19.44■□□□□ 0.7
ACTN4-211ENST00000589528 ZBED3Q96IU2 234 aaPredicted RBP19.44■□□□□ 0.7
ACTN4-211ENST00000589528 VEZTQ9HBM0 779 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms