RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 PTPN12Q05209 780 aaKnown RBP31.06■■■□□ 2.56
CIRBP-223ENST00000589266 CST9Q5W186 159 aa31.06■■■□□ 2.56
CIRBP-223ENST00000589266 DDX46Q7L014 1031 aaKnown RBP31.06■■■□□ 2.56
CIRBP-223ENST00000589266 DCTPP1Q9H773 170 aa31.06■■■□□ 2.56
CIRBP-223ENST00000589266 COL4A5P29400 1685 aa31.06■■■□□ 2.56
CIRBP-223ENST00000589266 HSP90AB4PQ58FF6 505 aa31.05■■■□□ 2.56
CIRBP-223ENST00000589266 GCC1Q96CN9 775 aa31.05■■■□□ 2.56
CIRBP-223ENST00000589266 RBM17Q96I25 401 aaKnown RBP31.05■■■□□ 2.56
CIRBP-223ENST00000589266 CCDC85AQ96PX6 553 aaPredicted RBP31.05■■■□□ 2.56
CIRBP-223ENST00000589266 CRAMP1Q96RY5 1269 aa31.05■■■□□ 2.56
CIRBP-223ENST00000589266 RGS19P49795 217 aa31.04■■■□□ 2.56
CIRBP-223ENST00000589266 TLL2Q9Y6L7 1015 aa31.04■■■□□ 2.56
CIRBP-223ENST00000589266 TRAF5O00463 557 aa31.03■■■□□ 2.56
CIRBP-223ENST00000589266 IGHDP01880 384 aa31.03■■■□□ 2.56
CIRBP-223ENST00000589266 MAP2K2P36507 400 aa31.03■■■□□ 2.56
CIRBP-223ENST00000589266 CIAO1O76071 339 aa31.02■■■□□ 2.56
CIRBP-223ENST00000589266 TAF7LQ5H9L4 462 aa31.02■■■□□ 2.56
CIRBP-223ENST00000589266 NIM1KQ8IY84 436 aa31.02■■■□□ 2.56
CIRBP-223ENST00000589266 SEC31BQ9NQW1 1179 aa31.02■■■□□ 2.56
CIRBP-223ENST00000589266 SURF6O75683 361 aaKnown RBP31.01■■■□□ 2.55
CIRBP-223ENST00000589266 GRAPQ13588 217 aa31.01■■■□□ 2.55
CIRBP-223ENST00000589266 CENPQQ7L2Z9 268 aaPredicted RBP31.01■■■□□ 2.55
CIRBP-223ENST00000589266 SMC5Q8IY18 1101 aa31.01■■■□□ 2.55
CIRBP-223ENST00000589266 GRAPLQ8TC17 118 aaPredicted RBP31.01■■■□□ 2.55
CIRBP-223ENST00000589266 IGHMBP2P38935 993 aaKnown RBP31■■■□□ 2.55
CIRBP-223ENST00000589266 ANKRD18AQ8IVF6 992 aa31■■■□□ 2.55
CIRBP-223ENST00000589266 EYA2O00167 538 aa30.99■■■□□ 2.55
CIRBP-223ENST00000589266 RAB11FIP3O75154 756 aa30.99■■■□□ 2.55
CIRBP-223ENST00000589266 RPS8P62241 208 aaKnown RBP30.99■■■□□ 2.55
CIRBP-223ENST00000589266 TMC4Q7Z404 712 aa30.99■■■□□ 2.55
CIRBP-223ENST00000589266 ADARB2Q9NS39 739 aaKnown RBP30.99■■■□□ 2.55
CIRBP-223ENST00000589266 PPEF1O14829 653 aaPredicted RBP30.98■■■□□ 2.55
CIRBP-223ENST00000589266 AOC2O75106 756 aa30.98■■■□□ 2.55
CIRBP-223ENST00000589266 BBOX1O75936 387 aa30.98■■■□□ 2.55
CIRBP-223ENST00000589266 G3BP1Q13283 466 aaKnown RBP eCLIP30.98■■■□□ 2.55
CIRBP-223ENST00000589266 B4GALNT3Q6L9W6 998 aa30.98■■■□□ 2.55
CIRBP-223ENST00000589266 ERC1Q8IUD2 1116 aa30.98■■■□□ 2.55
CIRBP-223ENST00000589266 MPHOSPH8Q99549 860 aa30.98■■■□□ 2.55
CIRBP-223ENST00000589266 TSKSQ9UJT2 592 aa30.98■■■□□ 2.55
CIRBP-223ENST00000589266 PA2G4Q9UQ80 394 aaKnown RBP30.98■■■□□ 2.55
CIRBP-223ENST00000589266 PPIP5K2O43314 1243 aa30.97■■■□□ 2.55
CIRBP-223ENST00000589266 IL15P40933 162 aaPredicted RBP30.97■■■□□ 2.55
CIRBP-223ENST00000589266 LDHAL6AQ6ZMR3 332 aa30.97■■■□□ 2.55
CIRBP-223ENST00000589266 ZNF594Q96JF6 807 aaPredicted RBP30.97■■■□□ 2.55
CIRBP-223ENST00000589266 TMX4Q9H1E5 349 aaPredicted RBP30.97■■■□□ 2.55
CIRBP-223ENST00000589266 BSDC1Q9NW68 430 aaPredicted RBP30.97■■■□□ 2.55
CIRBP-223ENST00000589266 CA12O43570 354 aa30.96■■■□□ 2.55
CIRBP-223ENST00000589266 KLHDC4Q8TBB5 520 aa30.96■■■□□ 2.55
CIRBP-223ENST00000589266 CELF1Q92879 486 aaKnown RBP30.96■■■□□ 2.55
CIRBP-223ENST00000589266 GPRC5DQ9NZD1 345 aa30.96■■■□□ 2.55
CIRBP-223ENST00000589266 SAPCD2Q86UD0 394 aa30.95■■■□□ 2.55
CIRBP-223ENST00000589266 VPS33BQ9H267 617 aa30.95■■■□□ 2.55
CIRBP-223ENST00000589266 CELF2O95319 508 aaKnown RBP30.94■■■□□ 2.54
CIRBP-223ENST00000589266 EXOC6BQ9Y2D4 811 aa30.94■■■□□ 2.54
CIRBP-223ENST00000589266 RIPOR2Q9Y4F9 1068 aa30.94■■■□□ 2.54
CIRBP-223ENST00000589266 OS9Q13438 667 aaPredicted RBP30.93■■■□□ 2.54
CIRBP-223ENST00000589266 ATG9AQ7Z3C6 839 aa30.93■■■□□ 2.54
CIRBP-223ENST00000589266 CNNM1Q9NRU3 951 aa30.93■■■□□ 2.54
CIRBP-223ENST00000589266 CASP8AP2Q9UKL3 1982 aa30.92■■■□□ 2.54
CIRBP-223ENST00000589266 AOC3Q16853 763 aa30.92■■■□□ 2.54
CIRBP-223ENST00000589266 SLC51AQ86UW1 340 aa30.92■■■□□ 2.54
CIRBP-223ENST00000589266 KIF1BPQ96EK5 621 aa30.92■■■□□ 2.54
CIRBP-223ENST00000589266 HHIPL1Q96JK4 782 aa30.92■■■□□ 2.54
CIRBP-223ENST00000589266 MCOLN1Q9GZU1 580 aa30.92■■■□□ 2.54
CIRBP-223ENST00000589266 SIL1Q9H173 461 aa30.92■■■□□ 2.54
CIRBP-223ENST00000589266 MROH5Q6ZUA9 1318 aa30.92■■■□□ 2.54
CIRBP-223ENST00000589266 TAF1P21675 1872 aa30.91■■■□□ 2.54
CIRBP-223ENST00000589266 ZNRF3Q9ULT6 936 aa30.91■■■□□ 2.54
CIRBP-223ENST00000589266 CXCL9Q07325 125 aa30.9■■■□□ 2.54
CIRBP-223ENST00000589266 LRRC24Q50LG9 513 aa30.9■■■□□ 2.54
CIRBP-223ENST00000589266 PUS3Q9BZE2 481 aaKnown RBP30.9■■■□□ 2.54
CIRBP-223ENST00000589266 COL4A1P02462 1669 aa30.9■■■□□ 2.54
CIRBP-223ENST00000589266 SUPT20HQ8NEM7 779 aa30.89■■■□□ 2.54
CIRBP-223ENST00000589266 RHPN1Q8TCX5 695 aa30.89■■■□□ 2.54
CIRBP-223ENST00000589266 LRRCC1Q9C099 1032 aa30.89■■■□□ 2.54
CIRBP-223ENST00000589266 ATP6V0A2Q9Y487 856 aa30.89■■■□□ 2.54
CIRBP-223ENST00000589266 SASH1O94885 1247 aa30.88■■■□□ 2.53
CIRBP-223ENST00000589266 GLIS2Q9BZE0 524 aaPredicted RBP30.88■■■□□ 2.53
CIRBP-223ENST00000589266 PGAP2Q9UHJ9 254 aa30.88■■■□□ 2.53
CIRBP-223ENST00000589266 SPEF2Q9C093 1822 aa30.88■■■□□ 2.53
CIRBP-223ENST00000589266 GMPSP49915 693 aaPredicted RBP30.87■■■□□ 2.53
CIRBP-223ENST00000589266 SP8Q8IXZ3 490 aa30.87■■■□□ 2.53
CIRBP-223ENST00000589266 ANKRD2Q9GZV1 360 aa30.87■■■□□ 2.53
CIRBP-223ENST00000589266 GPR108Q9NPR9 543 aa30.87■■■□□ 2.53
CIRBP-223ENST00000589266 PCDH10Q9P2E7 1040 aa30.87■■■□□ 2.53
CIRBP-223ENST00000589266 CEP126Q9P2H0 1117 aa30.87■■■□□ 2.53
CIRBP-223ENST00000589266 NUCB1Q02818 461 aa30.86■■■□□ 2.53
CIRBP-223ENST00000589266 ZC3H15Q8WU90 426 aaKnown RBP30.86■■■□□ 2.53
CIRBP-223ENST00000589266 ZBTB47Q9UFB7 747 aaPredicted RBP30.86■■■□□ 2.53
CIRBP-223ENST00000589266 MINPP1Q9UNW1 487 aa30.86■■■□□ 2.53
CIRBP-223ENST00000589266 LRRC37AA6NMS7 1700 aa30.85■■■□□ 2.53
CIRBP-223ENST00000589266 METTL24Q5JXM2 366 aa30.85■■■□□ 2.53
CIRBP-223ENST00000589266 RTFDC1Q9BY42 306 aaPredicted RBP30.85■■■□□ 2.53
CIRBP-223ENST00000589266 ANKRD45Q5TZF3 282 aa30.84■■■□□ 2.53
CIRBP-223ENST00000589266 CIAPIN1Q6FI81 312 aa30.84■■■□□ 2.53
CIRBP-223ENST00000589266 ZNF408Q9H9D4 720 aa30.84■■■□□ 2.53
CIRBP-223ENST00000589266 PDE4DIPQ5VU43 2346 aa30.84■■■□□ 2.53
CIRBP-223ENST00000589266 PDE8BO95263 885 aa30.83■■■□□ 2.53
CIRBP-223ENST00000589266 CHRNDQ07001 517 aa30.83■■■□□ 2.53
CIRBP-223ENST00000589266 DGKZQ13574 1117 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms