RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ZNF609O15014 1411 aa19.56■□□□□ 0.72
SF3A2-204ENST00000589118 KLRK1P26718 216 aa19.55■□□□□ 0.72
SF3A2-204ENST00000589118 PODNQ7Z5L7 613 aa19.55■□□□□ 0.72
SF3A2-204ENST00000589118 CCDC191Q8NCU4 936 aa19.55■□□□□ 0.72
SF3A2-204ENST00000589118 MINPP1Q9UNW1 487 aa19.55■□□□□ 0.72
SF3A2-204ENST00000589118 RALBP1Q15311 655 aa19.54■□□□□ 0.72
SF3A2-204ENST00000589118 PKN2Q16513 984 aaKnown RBP19.54■□□□□ 0.72
SF3A2-204ENST00000589118 C8orf58Q8NAV2 365 aa19.54■□□□□ 0.72
SF3A2-204ENST00000589118 GREM2Q9H772 168 aa19.54■□□□□ 0.72
SF3A2-204ENST00000589118 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
SF3A2-204ENST00000589118 FBXO46Q6PJ61 603 aaPredicted RBP19.53■□□□□ 0.72
SF3A2-204ENST00000589118 METTL22Q9BUU2 404 aaPredicted RBP19.53■□□□□ 0.72
SF3A2-204ENST00000589118 FKTNO75072 461 aa19.52■□□□□ 0.72
SF3A2-204ENST00000589118 CCT4P50991 539 aaKnown RBP19.52■□□□□ 0.72
SF3A2-204ENST00000589118 KIAA0825Q8IV33 1275 aa19.52■□□□□ 0.72
SF3A2-204ENST00000589118 TTLL11Q8NHH1 800 aa19.52■□□□□ 0.72
SF3A2-204ENST00000589118 MAP3K2Q9Y2U5 619 aa19.52■□□□□ 0.72
SF3A2-204ENST00000589118 PCDHAC2Q9Y5I4 1007 aa19.52■□□□□ 0.72
SF3A2-204ENST00000589118 MYH3P11055 1940 aa19.52■□□□□ 0.72
SF3A2-204ENST00000589118 POTEFA5A3E0 1075 aa19.51■□□□□ 0.71
SF3A2-204ENST00000589118 IGKV5-2P06315 115 aa19.51■□□□□ 0.71
SF3A2-204ENST00000589118 CTSWP56202 376 aa19.51■□□□□ 0.71
SF3A2-204ENST00000589118 WDR43Q15061 677 aaKnown RBP eCLIP19.51■□□□□ 0.71
SF3A2-204ENST00000589118 ANGEL1Q9UNK9 670 aaKnown RBP19.51■□□□□ 0.71
SF3A2-204ENST00000589118 MED23Q9ULK4 1368 aa19.51■□□□□ 0.71
SF3A2-204ENST00000589118 CWF19L2Q2TBE0 894 aaKnown RBP19.5■□□□□ 0.71
SF3A2-204ENST00000589118 SPRYD7Q5W111 196 aa19.5■□□□□ 0.71
SF3A2-204ENST00000589118 OGFOD1Q8N543 542 aa19.5■□□□□ 0.71
SF3A2-204ENST00000589118 CLMNQ96JQ2 1002 aa19.5■□□□□ 0.71
SF3A2-204ENST00000589118 MYBBP1AQ9BQG0 1328 aaKnown RBP19.5■□□□□ 0.71
SF3A2-204ENST00000589118 SNAP23O00161 211 aa19.49■□□□□ 0.71
SF3A2-204ENST00000589118 NF2P35240 595 aa19.49■□□□□ 0.71
SF3A2-204ENST00000589118 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
SF3A2-204ENST00000589118 TSPYL6Q8N831 410 aa19.49■□□□□ 0.71
SF3A2-204ENST00000589118 BSDC1Q9NW68 430 aaPredicted RBP19.49■□□□□ 0.71
SF3A2-204ENST00000589118 APAF1O14727 1248 aa19.48■□□□□ 0.71
SF3A2-204ENST00000589118 HSP90B1P14625 803 aaKnown RBP19.48■□□□□ 0.71
SF3A2-204ENST00000589118 GTF2IP78347 998 aa19.48■□□□□ 0.71
SF3A2-204ENST00000589118 LDLRAD1Q5T700 205 aa19.48■□□□□ 0.71
SF3A2-204ENST00000589118 STRIP1Q5VSL9 837 aa19.48■□□□□ 0.71
SF3A2-204ENST00000589118 TTLL5Q6EMB2 1281 aa19.48■□□□□ 0.71
SF3A2-204ENST00000589118 ARMC9Q7Z3E5 817 aa19.48■□□□□ 0.71
SF3A2-204ENST00000589118 CDC5LQ99459 802 aaKnown RBP19.48■□□□□ 0.71
SF3A2-204ENST00000589118 TRIM17Q9Y577 477 aa19.48■□□□□ 0.71
SF3A2-204ENST00000589118 PI4KAP2A4QPH2 592 aa19.47■□□□□ 0.71
SF3A2-204ENST00000589118 SREBF2Q12772 1141 aa19.47■□□□□ 0.71
SF3A2-204ENST00000589118 PI4KAP1Q8N8J0 262 aa19.47■□□□□ 0.71
SF3A2-204ENST00000589118 COA1Q9GZY4 146 aa19.47■□□□□ 0.71
SF3A2-204ENST00000589118 AOX1Q06278 1338 aa19.47■□□□□ 0.71
SF3A2-204ENST00000589118 IGF2BP3O00425 579 aaKnown RBP eCLIP19.46■□□□□ 0.71
SF3A2-204ENST00000589118 CAP1Q01518 475 aa19.46■□□□□ 0.71
SF3A2-204ENST00000589118 G2E3Q7L622 706 aa19.46■□□□□ 0.71
SF3A2-204ENST00000589118 ZBED3Q96IU2 234 aaPredicted RBP19.46■□□□□ 0.71
SF3A2-204ENST00000589118 SSC5DA1L4H1 1573 aa19.45■□□□□ 0.7
SF3A2-204ENST00000589118 NOM1Q5C9Z4 860 aaKnown RBP19.45■□□□□ 0.7
SF3A2-204ENST00000589118 OTOP1Q7RTM1 612 aa19.45■□□□□ 0.7
SF3A2-204ENST00000589118 SLC10A4Q96EP9 437 aa19.45■□□□□ 0.7
SF3A2-204ENST00000589118 IFT57Q9NWB7 429 aa19.45■□□□□ 0.7
SF3A2-204ENST00000589118 F8W031 263 aaPredicted RBP19.44■□□□□ 0.7
SF3A2-204ENST00000589118 DDX58O95786 925 aaKnown RBP19.44■□□□□ 0.7
SF3A2-204ENST00000589118 HABP4Q5JVS0 413 aaKnown RBP19.44■□□□□ 0.7
SF3A2-204ENST00000589118 KSR2Q6VAB6 950 aa19.44■□□□□ 0.7
SF3A2-204ENST00000589118 UBE3BQ7Z3V4 1068 aa19.44■□□□□ 0.7
SF3A2-204ENST00000589118 IFNL1Q8IU54 200 aa19.44■□□□□ 0.7
SF3A2-204ENST00000589118 CERS5Q8N5B7 392 aa19.44■□□□□ 0.7
SF3A2-204ENST00000589118 CFHR5Q9BXR6 569 aa19.44■□□□□ 0.7
SF3A2-204ENST00000589118 DEFB129Q9H1M3 183 aa19.44■□□□□ 0.7
SF3A2-204ENST00000589118 JAG2Q9Y219 1238 aa19.44■□□□□ 0.7
SF3A2-204ENST00000589118 ZNF804BA4D1E1 1349 aa19.44■□□□□ 0.7
SF3A2-204ENST00000589118 CLRN2A0PK11 232 aa19.43■□□□□ 0.7
SF3A2-204ENST00000589118 GNAI1P63096 354 aa19.43■□□□□ 0.7
SF3A2-204ENST00000589118 APOBEC3FQ8IUX4 373 aaKnown RBP19.43■□□□□ 0.7
SF3A2-204ENST00000589118 HELBQ8NG08 1087 aaPredicted RBP19.43■□□□□ 0.7
SF3A2-204ENST00000589118 CD99L2Q8TCZ2 262 aa19.43■□□□□ 0.7
SF3A2-204ENST00000589118 WNK4Q96J92 1243 aa19.43■□□□□ 0.7
SF3A2-204ENST00000589118 MYO3BQ8WXR4 1341 aa19.43■□□□□ 0.7
SF3A2-204ENST00000589118 NEURL1BA8MQ27 555 aa19.42■□□□□ 0.7
SF3A2-204ENST00000589118 TAF5LO75529 589 aa19.42■□□□□ 0.7
SF3A2-204ENST00000589118 EN2P19622 333 aaPredicted RBP19.42■□□□□ 0.7
SF3A2-204ENST00000589118 GJA5P36382 358 aa19.42■□□□□ 0.7
SF3A2-204ENST00000589118 CCDC30Q5VVM6 783 aa19.42■□□□□ 0.7
SF3A2-204ENST00000589118 TSR2Q969E8 191 aaKnown RBP19.42■□□□□ 0.7
SF3A2-204ENST00000589118 LEMD3Q9Y2U8 911 aa19.42■□□□□ 0.7
SF3A2-204ENST00000589118 H7C1W4 665 aa19.41■□□□□ 0.7
SF3A2-204ENST00000589118 ITGA6P23229 1130 aa19.41■□□□□ 0.7
SF3A2-204ENST00000589118 IGHMBP2P38935 993 aaKnown RBP19.41■□□□□ 0.7
SF3A2-204ENST00000589118 NBPF12Q5TAG4 269 aaPredicted RBP19.41■□□□□ 0.7
SF3A2-204ENST00000589118 ECM29Q5VYK3 1845 aa19.41■□□□□ 0.7
SF3A2-204ENST00000589118 MANSC4A6NHS7 340 aaPredicted RBP19.4■□□□□ 0.7
SF3A2-204ENST00000589118 DLGAP5Q15398 846 aa19.4■□□□□ 0.7
SF3A2-204ENST00000589118 PRMT6Q96LA8 375 aaPredicted RBP19.4■□□□□ 0.7
SF3A2-204ENST00000589118 CD209Q9NNX6 404 aa19.4■□□□□ 0.7
SF3A2-204ENST00000589118 CHRNDQ07001 517 aa19.39■□□□□ 0.69
SF3A2-204ENST00000589118 CRHR2Q13324 411 aa19.39■□□□□ 0.69
SF3A2-204ENST00000589118 PTPN18Q99952 460 aa19.39■□□□□ 0.69
SF3A2-204ENST00000589118 PTPN22Q9Y2R2 807 aa19.39■□□□□ 0.69
SF3A2-204ENST00000589118 A0A1B0GUL6 1792 aa19.39■□□□□ 0.69
SF3A2-204ENST00000589118 USP2O75604 605 aaPredicted RBP19.38■□□□□ 0.69
SF3A2-204ENST00000589118 ALDH1A1P00352 501 aa19.38■□□□□ 0.69
SF3A2-204ENST00000589118 LAMB1P07942 1786 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms