RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 H7C1W4 665 aa17.95■□□□□ 0.46
VMP1-209ENST00000588915 CCT4P50991 539 aaKnown RBP17.95■□□□□ 0.46
VMP1-209ENST00000588915 OGFOD1Q8N543 542 aa17.95■□□□□ 0.46
VMP1-209ENST00000588915 PLA2G12BQ9BX93 195 aa17.95■□□□□ 0.46
VMP1-209ENST00000588915 NEURL1BA8MQ27 555 aa17.94■□□□□ 0.46
VMP1-209ENST00000588915 TRPA1O75762 1119 aa17.94■□□□□ 0.46
VMP1-209ENST00000588915 STRIP1Q5VSL9 837 aa17.94■□□□□ 0.46
VMP1-209ENST00000588915 COA1Q9GZY4 146 aa17.94■□□□□ 0.46
VMP1-209ENST00000588915 GREM2Q9H772 168 aa17.94■□□□□ 0.46
VMP1-209ENST00000588915 DACT2Q5SW24 774 aa17.93■□□□□ 0.46
VMP1-209ENST00000588915 RASAL3Q86YV0 1011 aa17.93■□□□□ 0.46
VMP1-209ENST00000588915 IL16Q14005 1332 aa17.93■□□□□ 0.46
VMP1-209ENST00000588915 AKAP11Q9UKA4 1901 aa17.92■□□□□ 0.46
VMP1-209ENST00000588915 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
VMP1-209ENST00000588915 IGHMBP2P38935 993 aaKnown RBP17.92■□□□□ 0.46
VMP1-209ENST00000588915 CWF19L2Q2TBE0 894 aaKnown RBP17.92■□□□□ 0.46
VMP1-209ENST00000588915 TWISTNBQ3B726 338 aaPredicted RBP17.92■□□□□ 0.46
VMP1-209ENST00000588915 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
VMP1-209ENST00000588915 ANKRD2Q9GZV1 360 aa17.92■□□□□ 0.46
VMP1-209ENST00000588915 PAPPA2Q9BXP8 1791 aa17.91■□□□□ 0.46
VMP1-209ENST00000588915 TSR2Q969E8 191 aaKnown RBP17.91■□□□□ 0.46
VMP1-209ENST00000588915 MYH3P11055 1940 aa17.91■□□□□ 0.46
VMP1-209ENST00000588915 WTIPA6NIX2 430 aaPredicted RBP17.9■□□□□ 0.46
VMP1-209ENST00000588915 WNT10BO00744 389 aa17.9■□□□□ 0.46
VMP1-209ENST00000588915 CSF1RP07333 972 aa17.9■□□□□ 0.46
VMP1-209ENST00000588915 GCKRQ14397 625 aa17.9■□□□□ 0.46
VMP1-209ENST00000588915 NBPF9Q3BBW0 867 aa17.9■□□□□ 0.46
VMP1-209ENST00000588915 UBE3BQ7Z3V4 1068 aa17.9■□□□□ 0.46
VMP1-209ENST00000588915 MYH16Q9H6N6 1097 aa17.9■□□□□ 0.46
VMP1-209ENST00000588915 NF2P35240 595 aa17.89■□□□□ 0.45
VMP1-209ENST00000588915 TTLL5Q6EMB2 1281 aa17.89■□□□□ 0.45
VMP1-209ENST00000588915 G2E3Q7L622 706 aa17.89■□□□□ 0.45
VMP1-209ENST00000588915 MPHOSPH8Q99549 860 aa17.89■□□□□ 0.45
VMP1-209ENST00000588915 HDAC9Q9UKV0 1011 aa17.89■□□□□ 0.45
VMP1-209ENST00000588915 ZNF804BA4D1E1 1349 aa17.89■□□□□ 0.45
VMP1-209ENST00000588915 ITGA6P23229 1130 aa17.88■□□□□ 0.45
VMP1-209ENST00000588915 CASP7P55210 303 aa17.88■□□□□ 0.45
VMP1-209ENST00000588915 FLIIQ13045 1269 aa17.88■□□□□ 0.45
VMP1-209ENST00000588915 CTU1Q7Z7A3 348 aaKnown RBP17.88■□□□□ 0.45
VMP1-209ENST00000588915 LINS1Q8NG48 757 aa17.88■□□□□ 0.45
VMP1-209ENST00000588915 SLC34A2O95436 690 aa17.87■□□□□ 0.45
VMP1-209ENST00000588915 TM4SF4P48230 202 aa17.87■□□□□ 0.45
VMP1-209ENST00000588915 NOM1Q5C9Z4 860 aaKnown RBP17.87■□□□□ 0.45
VMP1-209ENST00000588915 TXNRD3Q86VQ6 643 aa17.87■□□□□ 0.45
VMP1-209ENST00000588915 DNAAF4Q8WXU2 420 aa17.87■□□□□ 0.45
VMP1-209ENST00000588915 UBE2Q2LH0YL09 131 aa17.86■□□□□ 0.45
VMP1-209ENST00000588915 PKN2Q16513 984 aaKnown RBP17.86■□□□□ 0.45
VMP1-209ENST00000588915 C15orf52Q6ZUT6 534 aaKnown RBP17.86■□□□□ 0.45
VMP1-209ENST00000588915 APOBEC3FQ8IUX4 373 aaKnown RBP17.86■□□□□ 0.45
VMP1-209ENST00000588915 ZBED3Q96IU2 234 aaPredicted RBP17.86■□□□□ 0.45
VMP1-209ENST00000588915 MXD3Q9BW11 206 aa17.86■□□□□ 0.45
VMP1-209ENST00000588915 FKBP5Q13451 457 aaPredicted RBP17.85■□□□□ 0.45
VMP1-209ENST00000588915 FBXW7Q969H0 707 aa17.85■□□□□ 0.45
VMP1-209ENST00000588915 CACNA1FO60840 1977 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 ANKRD18BA2A2Z9 1011 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 KCNJ4P48050 445 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 CHRNDQ07001 517 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 TTLL12Q14166 644 aaPredicted RBP17.84■□□□□ 0.45
VMP1-209ENST00000588915 PRAMEF18Q5VWM3 479 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 MOB2Q70IA6 237 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 ARMC9Q7Z3E5 817 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 WDR63Q8IWG1 891 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 MTMR14Q8NCE2 650 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 CFHR5Q9BXR6 569 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 CD209Q9NNX6 404 aa17.84■□□□□ 0.45
VMP1-209ENST00000588915 VAMP4O75379 141 aa17.83■□□□□ 0.44
VMP1-209ENST00000588915 GTF2IP78347 998 aa17.83■□□□□ 0.44
VMP1-209ENST00000588915 SREBF2Q12772 1141 aa17.83■□□□□ 0.44
VMP1-209ENST00000588915 CCDC184Q52MB2 194 aa17.83■□□□□ 0.44
VMP1-209ENST00000588915 KIAA0825Q8IV33 1275 aa17.83■□□□□ 0.44
VMP1-209ENST00000588915 ZNF646O15015 1829 aaPredicted RBP17.83■□□□□ 0.44
VMP1-209ENST00000588915 FKBP1AP62942 108 aaKnown RBP17.82■□□□□ 0.44
VMP1-209ENST00000588915 LDLRAD1Q5T700 205 aa17.82■□□□□ 0.44
VMP1-209ENST00000588915 SCAF8Q9UPN6 1271 aaKnown RBP17.82■□□□□ 0.44
VMP1-209ENST00000588915 COL1A1P02452 1464 aaPredicted RBP17.82■□□□□ 0.44
VMP1-209ENST00000588915 SPEF2Q9C093 1822 aa17.82■□□□□ 0.44
VMP1-209ENST00000588915 FANCIQ9NVI1 1328 aa17.81■□□□□ 0.44
VMP1-209ENST00000588915 UNCXA6NJT0 531 aa17.81■□□□□ 0.44
VMP1-209ENST00000588915 SASH1O94885 1247 aa17.81■□□□□ 0.44
VMP1-209ENST00000588915 INHBEP58166 350 aa17.81■□□□□ 0.44
VMP1-209ENST00000588915 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
VMP1-209ENST00000588915 IFIT5Q13325 482 aaKnown RBP17.81■□□□□ 0.44
VMP1-209ENST00000588915 ZNF296Q8WUU4 475 aaPredicted RBP17.81■□□□□ 0.44
VMP1-209ENST00000588915 PPP2R3BQ9Y5P8 575 aa17.81■□□□□ 0.44
VMP1-209ENST00000588915 IRS2Q9Y4H2 1338 aa17.8■□□□□ 0.44
VMP1-209ENST00000588915 GPR25O00155 361 aa17.8■□□□□ 0.44
VMP1-209ENST00000588915 IL1R1P14778 569 aa17.8■□□□□ 0.44
VMP1-209ENST00000588915 KLRK1P26718 216 aa17.8■□□□□ 0.44
VMP1-209ENST00000588915 FOXO4P98177 505 aa17.8■□□□□ 0.44
VMP1-209ENST00000588915 DLGAP5Q15398 846 aa17.8■□□□□ 0.44
VMP1-209ENST00000588915 MAP3K11Q16584 847 aa17.8■□□□□ 0.44
VMP1-209ENST00000588915 TBC1D8O95759 1140 aa17.79■□□□□ 0.44
VMP1-209ENST00000588915 ALDH1A1P00352 501 aa17.79■□□□□ 0.44
VMP1-209ENST00000588915 BEND3Q5T5X7 828 aa17.79■□□□□ 0.44
VMP1-209ENST00000588915 ZNF804AQ7Z570 1209 aa17.79■□□□□ 0.44
VMP1-209ENST00000588915 DEFB129Q9H1M3 183 aa17.79■□□□□ 0.44
VMP1-209ENST00000588915 PPP1R12BO60237 982 aaPredicted RBP17.78■□□□□ 0.44
VMP1-209ENST00000588915 SPRYD7Q5W111 196 aa17.78■□□□□ 0.44
VMP1-209ENST00000588915 HPS5Q9UPZ3 1129 aa17.78■□□□□ 0.44
VMP1-209ENST00000588915 MYO1BO43795 1136 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms