RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 ESPNB1AK53 854 aa17.84■□□□□ 0.45
PTPRS-206ENST00000588552 SKIDA1Q1XH10 827 aa17.84■□□□□ 0.45
PTPRS-206ENST00000588552 IL17REQ8NFR9 667 aa17.84■□□□□ 0.45
PTPRS-206ENST00000588552 SAMM50Q9Y512 469 aa17.84■□□□□ 0.45
PTPRS-206ENST00000588552 RTL9Q8NET4 1388 aa17.84■□□□□ 0.45
PTPRS-206ENST00000588552 CLIP2Q9UDT6 1046 aa17.84■□□□□ 0.45
PTPRS-206ENST00000588552 MBD4O95243 580 aa17.84■□□□□ 0.45
PTPRS-206ENST00000588552 BMP15O95972 392 aa17.84■□□□□ 0.45
PTPRS-206ENST00000588552 DHX32Q7L7V1 743 aaKnown RBP17.84■□□□□ 0.45
PTPRS-206ENST00000588552 OTUD7AQ8TE49 926 aaPredicted RBP17.84■□□□□ 0.45
PTPRS-206ENST00000588552 XAGE2Q96GT9 111 aa17.84■□□□□ 0.45
PTPRS-206ENST00000588552 ERVK-7P63135 1459 aa17.84■□□□□ 0.45
PTPRS-206ENST00000588552 UFL1O94874 794 aa17.83■□□□□ 0.45
PTPRS-206ENST00000588552 APOBRQ0VD83 1088 aa17.83■□□□□ 0.45
PTPRS-206ENST00000588552 SPA17Q15506 151 aa17.83■□□□□ 0.44
PTPRS-206ENST00000588552 RUFY3Q7L099 469 aa17.83■□□□□ 0.44
PTPRS-206ENST00000588552 RBM27Q9P2N5 1060 aaKnown RBP17.83■□□□□ 0.44
PTPRS-206ENST00000588552 POTEJP0CG39 1038 aa17.83■□□□□ 0.44
PTPRS-206ENST00000588552 HIBADHP31937 336 aaKnown RBP17.83■□□□□ 0.44
PTPRS-206ENST00000588552 KCNG4Q8TDN1 519 aa17.83■□□□□ 0.44
PTPRS-206ENST00000588552 USP25Q9UHP3 1055 aa17.83■□□□□ 0.44
PTPRS-206ENST00000588552 CNPY2Q9Y2B0 182 aa17.83■□□□□ 0.44
PTPRS-206ENST00000588552 NAPAP54920 295 aa17.82■□□□□ 0.44
PTPRS-206ENST00000588552 KLHL40Q2TBA0 621 aa17.82■□□□□ 0.44
PTPRS-206ENST00000588552 MTERF4Q7Z6M4 381 aaKnown RBP17.82■□□□□ 0.44
PTPRS-206ENST00000588552 USP26Q9BXU7 913 aa17.82■□□□□ 0.44
PTPRS-206ENST00000588552 PNMA6EA0A0J9YXQ4 647 aa17.82■□□□□ 0.44
PTPRS-206ENST00000588552 SYKP43405 635 aa17.82■□□□□ 0.44
PTPRS-206ENST00000588552 ROBO2Q9HCK4 1378 aa17.82■□□□□ 0.44
PTPRS-206ENST00000588552 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
PTPRS-206ENST00000588552 DESP17661 470 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 RBM26Q5T8P6 1007 aaKnown RBP17.81■□□□□ 0.44
PTPRS-206ENST00000588552 TAF4BQ92750 862 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 KCNQ3O43525 872 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 ISM2Q6H9L7 571 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 F13A1P00488 732 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 LRRC27Q9C0I9 530 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 LIG1P18858 919 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 MTIF2P46199 727 aaKnown RBP17.81■□□□□ 0.44
PTPRS-206ENST00000588552 IQCEQ6IPM2 695 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 PRKCSHP14314 528 aaPredicted RBP17.81■□□□□ 0.44
PTPRS-206ENST00000588552 TRIM21P19474 475 aaKnown RBP17.81■□□□□ 0.44
PTPRS-206ENST00000588552 ZNF165P49910 485 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 ZSCAN30Q86W11 494 aa17.81■□□□□ 0.44
PTPRS-206ENST00000588552 ZSCAN12O43309 604 aa17.8■□□□□ 0.44
PTPRS-206ENST00000588552 NUP88Q99567 741 aaPredicted RBP17.8■□□□□ 0.44
PTPRS-206ENST00000588552 AATKQ6ZMQ8 1374 aa17.8■□□□□ 0.44
PTPRS-206ENST00000588552 ERMNQ8TAM6 284 aa17.8■□□□□ 0.44
PTPRS-206ENST00000588552 ATP7BP35670 1465 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 AOX1Q06278 1338 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 VPS36Q86VN1 386 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 CPLX3Q8WVH0 158 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 GGA1Q9UJY5 639 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 TAF5LO75529 589 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 SSR1P43307 286 aaKnown RBP17.79■□□□□ 0.44
PTPRS-206ENST00000588552 CCDC129Q6ZRS4 1044 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 STXBP4Q6ZWJ1 553 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 MPHOSPH6Q99547 160 aaKnown RBP17.79■□□□□ 0.44
PTPRS-206ENST00000588552 PATL2C9JE40 543 aaKnown RBP17.79■□□□□ 0.44
PTPRS-206ENST00000588552 CCDC40Q4G0X9 1142 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 USP48Q86UV5 1035 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 RRP36Q96EU6 259 aaKnown RBP17.79■□□□□ 0.44
PTPRS-206ENST00000588552 C6orf50Q9HD87 102 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
PTPRS-206ENST00000588552 NEURL1BA8MQ27 555 aa17.79■□□□□ 0.44
PTPRS-206ENST00000588552 MYCNP04198 464 aaPredicted RBP17.79■□□□□ 0.44
PTPRS-206ENST00000588552 KRI1Q8N9T8 703 aaKnown RBP17.78■□□□□ 0.44
PTPRS-206ENST00000588552 TTC6Q86TZ1 520 aa17.78■□□□□ 0.44
PTPRS-206ENST00000588552 LPIN2Q92539 896 aa17.78■□□□□ 0.44
PTPRS-206ENST00000588552 ERLIN1O75477 346 aa17.78■□□□□ 0.44
PTPRS-206ENST00000588552 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
PTPRS-206ENST00000588552 MRPS27Q92552 414 aaKnown RBP17.78■□□□□ 0.44
PTPRS-206ENST00000588552 MAP7D2Q96T17 732 aa17.78■□□□□ 0.44
PTPRS-206ENST00000588552 KIF1BO60333 1816 aa17.78■□□□□ 0.44
PTPRS-206ENST00000588552 DNM1Q05193 864 aaKnown RBP17.78■□□□□ 0.44
PTPRS-206ENST00000588552 AXDND1Q5T1B0 1012 aaPredicted RBP17.78■□□□□ 0.44
PTPRS-206ENST00000588552 GIMAP6Q6P9H5 292 aa17.78■□□□□ 0.44
PTPRS-206ENST00000588552 TEX11Q8IYF3 940 aa17.78■□□□□ 0.44
PTPRS-206ENST00000588552 SMARCC2Q8TAQ2 1214 aa17.78■□□□□ 0.44
PTPRS-206ENST00000588552 PTPDC1A2A3K4 754 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 SEC24BO95487 1268 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 CAVIN2O95810 425 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 CALML3P27482 149 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 MARCKSP29966 332 aaPredicted RBP17.77■□□□□ 0.44
PTPRS-206ENST00000588552 ENOX2Q16206 610 aaKnown RBP17.77■□□□□ 0.44
PTPRS-206ENST00000588552 TCERG1LQ5VWI1 586 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 CCDC24Q8N4L8 307 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 YEATS4O95619 227 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 ZSCAN23Q3MJ62 389 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 EXOC1Q9NV70 894 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 RMND1Q9NWS8 449 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 CLEC11AQ9Y240 323 aa17.77■□□□□ 0.44
PTPRS-206ENST00000588552 RXRAP19793 462 aa17.77■□□□□ 0.43
PTPRS-206ENST00000588552 STAT6P42226 847 aa17.77■□□□□ 0.43
PTPRS-206ENST00000588552 FAM114A1Q8IWE2 563 aa17.77■□□□□ 0.43
PTPRS-206ENST00000588552 ARMT1Q9H993 441 aa17.77■□□□□ 0.43
PTPRS-206ENST00000588552 TBCAO75347 108 aaKnown RBP17.77■□□□□ 0.43
PTPRS-206ENST00000588552 AFMP43652 599 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms