RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 SPEF2Q9C093 1822 aa16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 SH3TC1Q8TE82 1336 aa16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 PCDH11XQ9BZA7 1347 aa16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 PCDH11YQ9BZA8 1340 aa16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 FIBPO43427 364 aa16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 ATL3Q6DD88 541 aa16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 NEK1Q96PY6 1258 aa16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 CWC25Q9NXE8 425 aaPredicted RBP16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 MEGF6O75095 1541 aa16.61■□□□□ 0.25
NEDD4L-223ENST00000588516 A0A0D9SFI3 127 aa16.6■□□□□ 0.25
NEDD4L-223ENST00000588516 H7C1W4 665 aa16.6■□□□□ 0.25
NEDD4L-223ENST00000588516 CCDC191Q8NCU4 936 aa16.6■□□□□ 0.25
NEDD4L-223ENST00000588516 MAP7D2Q96T17 732 aa16.6■□□□□ 0.25
NEDD4L-223ENST00000588516 DDX19AQ9NUU7 478 aaKnown RBP16.6■□□□□ 0.25
NEDD4L-223ENST00000588516 CFAP45Q9UL16 551 aa16.6■□□□□ 0.25
NEDD4L-223ENST00000588516 TPCN1Q9ULQ1 816 aa16.6■□□□□ 0.25
NEDD4L-223ENST00000588516 PALLDQ8WX93 1383 aa16.6■□□□□ 0.25
NEDD4L-223ENST00000588516 CIAO1O76071 339 aa16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 HMGN5P82970 282 aaKnown RBP16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 TFCP2Q12800 502 aa16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 UBE3BQ7Z3V4 1068 aa16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 LRP10Q7Z4F1 713 aa16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 KBTBD3Q8NAB2 608 aa16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 RNF214Q8ND24 703 aa16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 KLRG1Q96E93 195 aa16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 DSCC1Q9BVC3 393 aa16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 GDPD2Q9HCC8 539 aa16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 USP25Q9UHP3 1055 aa16.59■□□□□ 0.25
NEDD4L-223ENST00000588516 HTRA3P83110 453 aa16.58■□□□□ 0.24
NEDD4L-223ENST00000588516 DNM1Q05193 864 aaKnown RBP16.58■□□□□ 0.24
NEDD4L-223ENST00000588516 MTERF4Q7Z6M4 381 aaKnown RBP16.58■□□□□ 0.24
NEDD4L-223ENST00000588516 TEX13AQ9BXU3 409 aaPredicted RBP16.58■□□□□ 0.24
NEDD4L-223ENST00000588516 USP16Q9Y5T5 823 aa16.58■□□□□ 0.24
NEDD4L-223ENST00000588516 CYP27B1O15528 508 aa16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 KDM4AO75164 1064 aa16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 LARGE1O95461 756 aa16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 FGD1P98174 961 aa16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 MAP3K11Q16584 847 aa16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 FOXD4L6Q3SYB3 417 aaPredicted RBP16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 FOXD4L3Q6VB84 417 aaPredicted RBP16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 FLAD1Q8NFF5 587 aa16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 ZCRB1Q8TBF4 217 aaKnown RBP16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 DBNLQ9UJU6 430 aaKnown RBP16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
NEDD4L-223ENST00000588516 ABCC12Q96J65 1359 aa16.56■□□□□ 0.24
NEDD4L-223ENST00000588516 ZFYP08048 801 aaPredicted RBP16.56■□□□□ 0.24
NEDD4L-223ENST00000588516 CPA1P15085 419 aa16.56■□□□□ 0.24
NEDD4L-223ENST00000588516 CASP7P55210 303 aa16.56■□□□□ 0.24
NEDD4L-223ENST00000588516 NKX1-1Q15270 411 aaPredicted RBP16.56■□□□□ 0.24
NEDD4L-223ENST00000588516 EPHA10Q5JZY3 1008 aa16.56■□□□□ 0.24
NEDD4L-223ENST00000588516 GTF3C6Q969F1 213 aa16.56■□□□□ 0.24
NEDD4L-223ENST00000588516 NUP62CLQ9H1M0 184 aa16.56■□□□□ 0.24
NEDD4L-223ENST00000588516 TLR7Q9NYK1 1049 aaKnown RBP16.56■□□□□ 0.24
NEDD4L-223ENST00000588516 CTNNA3Q9UI47 895 aa16.56■□□□□ 0.24
NEDD4L-223ENST00000588516 H3BQV1 296 aa16.55■□□□□ 0.24
NEDD4L-223ENST00000588516 CTAGE5O15320 804 aa16.55■□□□□ 0.24
NEDD4L-223ENST00000588516 HSP90B1P14625 803 aaKnown RBP16.55■□□□□ 0.24
NEDD4L-223ENST00000588516 LMBR1LQ6UX01 489 aa16.55■□□□□ 0.24
NEDD4L-223ENST00000588516 JMYQ8N9B5 988 aa16.55■□□□□ 0.24
NEDD4L-223ENST00000588516 RGS22Q8NE09 1264 aa16.55■□□□□ 0.24
NEDD4L-223ENST00000588516 CHAMP1Q96JM3 812 aa16.55■□□□□ 0.24
NEDD4L-223ENST00000588516 SPATA32Q96LK8 384 aa16.55■□□□□ 0.24
NEDD4L-223ENST00000588516 TOB2Q14106 344 aaPredicted RBP16.54■□□□□ 0.24
NEDD4L-223ENST00000588516 HSP90AA2PQ14568 343 aaPredicted RBP16.54■□□□□ 0.24
NEDD4L-223ENST00000588516 NAA16Q6N069 864 aaPredicted RBP16.54■□□□□ 0.24
NEDD4L-223ENST00000588516 SASS6Q6UVJ0 657 aa16.54■□□□□ 0.24
NEDD4L-223ENST00000588516 DHX32Q7L7V1 743 aaKnown RBP16.54■□□□□ 0.24
NEDD4L-223ENST00000588516 NECAB1Q8N987 351 aa16.54■□□□□ 0.24
NEDD4L-223ENST00000588516 FUCA2Q9BTY2 467 aa16.54■□□□□ 0.24
NEDD4L-223ENST00000588516 NMRK2Q9NPI5 230 aa16.54■□□□□ 0.24
NEDD4L-223ENST00000588516 PAG1Q9NWQ8 432 aa16.54■□□□□ 0.24
NEDD4L-223ENST00000588516 UBR2Q8IWV8 1755 aa16.53■□□□□ 0.24
NEDD4L-223ENST00000588516 EYA2O00167 538 aa16.53■□□□□ 0.24
NEDD4L-223ENST00000588516 PFKFB2O60825 505 aa16.53■□□□□ 0.24
NEDD4L-223ENST00000588516 ADCY5O95622 1261 aa16.53■□□□□ 0.24
NEDD4L-223ENST00000588516 HMGB2P26583 209 aaKnown RBP16.53■□□□□ 0.24
NEDD4L-223ENST00000588516 FAM200AQ8TCP9 573 aa16.53■□□□□ 0.24
NEDD4L-223ENST00000588516 ZNF396Q96N95 335 aaPredicted RBP16.53■□□□□ 0.24
NEDD4L-223ENST00000588516 DNAJC2Q99543 621 aaKnown RBP16.53■□□□□ 0.24
NEDD4L-223ENST00000588516 LY75O60449 1722 aa16.53■□□□□ 0.24
NEDD4L-223ENST00000588516 FOXO4P98177 505 aa16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 TRIM28Q13263 835 aaKnown RBP16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 Q6ZUG5 572 aa16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 FBXL16Q8N461 479 aa16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 RBM46Q8TBY0 533 aaKnown RBP16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 DBNDD2Q9BQY9 259 aa16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 TNMDQ9H2S6 317 aa16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 CEP126Q9P2H0 1117 aa16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 CHMP3Q9Y3E7 222 aa16.52■□□□□ 0.24
NEDD4L-223ENST00000588516 WDR90Q96KV7 1748 aa16.52■□□□□ 0.23
NEDD4L-223ENST00000588516 DYNC1I1O14576 645 aa16.51■□□□□ 0.23
NEDD4L-223ENST00000588516 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
NEDD4L-223ENST00000588516 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
NEDD4L-223ENST00000588516 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
NEDD4L-223ENST00000588516 ST3GAL1Q11201 340 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms