RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 GNL3LQ9NVN8 582 aaKnown RBP11.17□□□□□ -0.62
CIRBP-218ENST00000588344 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
CIRBP-218ENST00000588344 MMP14P50281 582 aa11.16□□□□□ -0.62
CIRBP-218ENST00000588344 FBXO33Q7Z6M2 555 aa11.16□□□□□ -0.62
CIRBP-218ENST00000588344 RHPN1Q8TCX5 695 aa11.16□□□□□ -0.62
CIRBP-218ENST00000588344 FAM84BQ96KN1 310 aaPredicted RBP11.16□□□□□ -0.62
CIRBP-218ENST00000588344 LRRCC1Q9C099 1032 aa11.16□□□□□ -0.62
CIRBP-218ENST00000588344 EXOC6BQ9Y2D4 811 aa11.16□□□□□ -0.62
CIRBP-218ENST00000588344 BRCA1P38398 1863 aaKnown RBP11.16□□□□□ -0.62
CIRBP-218ENST00000588344 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
CIRBP-218ENST00000588344 MYH3P11055 1940 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 A0A1B0GUL7 405 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 GLTPD2A6NH11 291 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 SEMA3EO15041 775 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 ECE2O60344 883 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 IL1R1P14778 569 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 PRELPP51888 382 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 TIMM10P62072 90 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 IRX6P78412 446 aaPredicted RBP11.15□□□□□ -0.62
CIRBP-218ENST00000588344 TNNI3KQ59H18 835 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 GORABQ5T7V8 394 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 POTEDQ86YR6 584 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 GPC2Q8N158 579 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 NEUROD6Q96NK8 337 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 CD209Q9NNX6 404 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 FPGT-TNNI3KV9GXZ4 949 aa11.15□□□□□ -0.62
CIRBP-218ENST00000588344 KDM2BQ8NHM5 1336 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 IRS2Q9Y4H2 1338 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 WTIPA6NIX2 430 aaPredicted RBP11.14□□□□□ -0.63
CIRBP-218ENST00000588344 SNAP23O00161 211 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 FRAT2O75474 233 aaPredicted RBP11.14□□□□□ -0.63
CIRBP-218ENST00000588344 IFIT2P09913 472 aaKnown RBP11.14□□□□□ -0.63
CIRBP-218ENST00000588344 DOK7Q18PE1 504 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 CCDC158Q5M9N0 1113 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 STRIP1Q5VSL9 837 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 CIAPIN1Q6FI81 312 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 SLC51AQ86UW1 340 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 TXNRD3Q86VQ6 643 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 DBNDD1Q9H9R9 158 aa11.14□□□□□ -0.63
CIRBP-218ENST00000588344 LRRC37AA6NMS7 1700 aa11.13□□□□□ -0.63
CIRBP-218ENST00000588344 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
CIRBP-218ENST00000588344 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
CIRBP-218ENST00000588344 VIL1P09327 827 aaKnown RBP11.13□□□□□ -0.63
CIRBP-218ENST00000588344 UQCRFS1P1P0C7P4 283 aa11.13□□□□□ -0.63
CIRBP-218ENST00000588344 RPS12P25398 132 aaKnown RBP11.13□□□□□ -0.63
CIRBP-218ENST00000588344 FKBP1AP62942 108 aaKnown RBP11.13□□□□□ -0.63
CIRBP-218ENST00000588344 CXCL9Q07325 125 aa11.13□□□□□ -0.63
CIRBP-218ENST00000588344 TTLL5Q6EMB2 1281 aa11.13□□□□□ -0.63
CIRBP-218ENST00000588344 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
CIRBP-218ENST00000588344 TDRD7Q8NHU6 1098 aaKnown RBP11.13□□□□□ -0.63
CIRBP-218ENST00000588344 ZNF512BQ96KM6 892 aaPredicted RBP11.13□□□□□ -0.63
CIRBP-218ENST00000588344 GPR101Q96P66 508 aaPredicted RBP11.13□□□□□ -0.63
CIRBP-218ENST00000588344 MYO3BQ8WXR4 1341 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 COL4A1P02462 1669 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 IGSF3O75054 1194 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 YY1P25490 414 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 KLRK1P26718 216 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 GYG1P46976 350 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 BCAMP50895 628 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 CCDC102BQ68D86 513 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 AACSQ86V21 672 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 SMC5Q8IY18 1101 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 TBC1D22AQ8WUA7 517 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 DPF2Q92785 391 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 EAF2Q96CJ1 260 aaPredicted RBP11.12□□□□□ -0.63
CIRBP-218ENST00000588344 DENND2AQ9ULE3 1009 aa11.12□□□□□ -0.63
CIRBP-218ENST00000588344 IQCA1LA6NCM1 817 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 YDJCA8MPS7 323 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 APBB1O00213 710 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 RAD17O75943 681 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 ANKRD45Q5TZF3 282 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 ZGPATQ8N5A5 531 aaKnown RBP11.11□□□□□ -0.63
CIRBP-218ENST00000588344 AGBL3Q8NEM8 1001 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 WDR66Q8TBY9 1149 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 GPATCH3Q96I76 525 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 IL1RAPL2Q9NP60 686 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 SUGT1Q9Y2Z0 365 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 DUOX1Q9NRD9 1551 aa11.11□□□□□ -0.63
CIRBP-218ENST00000588344 PDS5AQ29RF7 1337 aaKnown RBP11.1□□□□□ -0.63
CIRBP-218ENST00000588344 FAM205AQ6ZU69 1335 aa11.1□□□□□ -0.63
CIRBP-218ENST00000588344 FER1L6Q2WGJ9 1857 aa11.1□□□□□ -0.63
CIRBP-218ENST00000588344 IGHDP01880 384 aa11.1□□□□□ -0.63
CIRBP-218ENST00000588344 GTF2IP78347 998 aa11.1□□□□□ -0.63
CIRBP-218ENST00000588344 TTC39AQ5SRH9 613 aa11.1□□□□□ -0.63
CIRBP-218ENST00000588344 RSBN1LQ6PCB5 846 aaPredicted RBP11.1□□□□□ -0.63
CIRBP-218ENST00000588344 OGFOD1Q8N543 542 aa11.1□□□□□ -0.63
CIRBP-218ENST00000588344 L3MBTL3Q96JM7 780 aaPredicted RBP11.1□□□□□ -0.63
CIRBP-218ENST00000588344 CCDC8Q9H0W5 538 aaPredicted RBP11.1□□□□□ -0.63
CIRBP-218ENST00000588344 GJA3Q9Y6H8 435 aa11.1□□□□□ -0.63
CIRBP-218ENST00000588344 H7C1D1 291 aa11.09□□□□□ -0.63
CIRBP-218ENST00000588344 PSMD14O00487 310 aa11.09□□□□□ -0.63
CIRBP-218ENST00000588344 DDNO94850 711 aaPredicted RBP11.09□□□□□ -0.63
CIRBP-218ENST00000588344 VEGFAP15692 232 aaPredicted RBP11.09□□□□□ -0.63
CIRBP-218ENST00000588344 ARID4AP29374 1257 aaPredicted RBP11.09□□□□□ -0.63
CIRBP-218ENST00000588344 LMOD1P29536 600 aaPredicted RBP11.09□□□□□ -0.63
CIRBP-218ENST00000588344 ADORA1P30542 326 aa11.09□□□□□ -0.63
CIRBP-218ENST00000588344 PHKA1P46020 1223 aa11.09□□□□□ -0.63
CIRBP-218ENST00000588344 DACT2Q5SW24 774 aa11.09□□□□□ -0.63
CIRBP-218ENST00000588344 SPTY2D1Q68D10 685 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms