RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 SOX18P35713 384 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 HYAL2Q12891 473 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 GRIN2CQ14957 1233 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 COL13A1Q5TAT6 717 aaPredicted RBP8.22□□□□□ -1.09
TUBD1-208ENST00000588009 SV2BQ7L1I2 683 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 NCAPG2Q86XI2 1143 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 CCNJLQ8IV13 435 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 KIAA0825Q8IV33 1275 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 TMEM74Q96NL1 305 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 CNTNAP3BQ96NU0 1288 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 OSMRQ99650 979 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 ZKSCAN3Q9BRR0 538 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 CNTNAP3Q9BZ76 1288 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 NUCKS1Q9H1E3 243 aaKnown RBP8.22□□□□□ -1.09
TUBD1-208ENST00000588009 EFCC1Q9HA90 598 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 MARK1Q9P0L2 795 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.22□□□□□ -1.09
TUBD1-208ENST00000588009 MINDY4BA8MYZ0 360 aa8.21□□□□□ -1.1
TUBD1-208ENST00000588009 F6X3S4 739 aa8.21□□□□□ -1.1
TUBD1-208ENST00000588009 SEC16BQ96JE7 1060 aa8.21□□□□□ -1.1
TUBD1-208ENST00000588009 HCN2Q9UL51 889 aa8.21□□□□□ -1.1
TUBD1-208ENST00000588009 SLC35F4A4IF30 521 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 H7C1W4 665 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 BNIP3LO60238 219 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 FBXO24O75426 580 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 RLBP1P12271 317 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 HOXD8P13378 290 aaPredicted RBP8.2□□□□□ -1.1
TUBD1-208ENST00000588009 ACPPP15309 386 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 EIF4A3P38919 411 aaKnown RBP8.2□□□□□ -1.1
TUBD1-208ENST00000588009 PLAURQ03405 335 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 SPEM2Q0P670 501 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 CEP120Q8N960 986 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 ZFYVE1Q9HBF4 777 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 NDFIP2Q9NV92 336 aa8.2□□□□□ -1.1
TUBD1-208ENST00000588009 TRPA1O75762 1119 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 GMPRP36959 345 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 PTSQ03393 145 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 MAP3K11Q16584 847 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 DBN1Q16643 649 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 TPTE2Q6XPS3 522 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 ZSCAN1Q8NBB4 408 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 ZNF296Q8WUU4 475 aaPredicted RBP8.19□□□□□ -1.1
TUBD1-208ENST00000588009 BHMTQ93088 406 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 SLC30A3Q99726 388 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 DZANK1Q9NVP4 752 aa8.19□□□□□ -1.1
TUBD1-208ENST00000588009 GRIA4P48058 902 aa8.18□□□□□ -1.1
TUBD1-208ENST00000588009 SPRED3Q2MJR0 410 aa8.18□□□□□ -1.1
TUBD1-208ENST00000588009 DHX32Q7L7V1 743 aaKnown RBP8.18□□□□□ -1.1
TUBD1-208ENST00000588009 PHC3Q8NDX5 983 aa8.18□□□□□ -1.1
TUBD1-208ENST00000588009 EAF1Q96JC9 268 aaPredicted RBP8.18□□□□□ -1.1
TUBD1-208ENST00000588009 CEP44Q9C0F1 390 aa8.18□□□□□ -1.1
TUBD1-208ENST00000588009 ZSWIM4Q9H7M6 989 aa8.18□□□□□ -1.1
TUBD1-208ENST00000588009 SOBPA7XYQ1 873 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 NFKBIEO00221 500 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 ITPKAP23677 461 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 NRLP54845 237 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 TRIM22Q8IYM9 498 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 NXPE3Q969Y0 559 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 RHOVQ96L33 236 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 NT5C1AQ9BXI3 368 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 PIF1Q9H611 641 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 KCNQ5Q9NR82 932 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 EFR3BQ9Y2G0 817 aa8.17□□□□□ -1.1
TUBD1-208ENST00000588009 TLDC2A0PJX2 215 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 METTL12A8MUP2 240 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 SSBP05455 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
TUBD1-208ENST00000588009 CELA3AP09093 270 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 CD33P20138 364 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 NASPP49321 788 aaPredicted RBP8.16□□□□□ -1.1
TUBD1-208ENST00000588009 LIG3P49916 1009 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 FBXL19Q6PCT2 694 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 RAB44Q7Z6P3 723 aaPredicted RBP8.16□□□□□ -1.1
TUBD1-208ENST00000588009 ABHD17AQ96GS6 310 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 SPACA7Q96KW9 195 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 NSUN5Q96P11 429 aaKnown RBP8.16□□□□□ -1.1
TUBD1-208ENST00000588009 HHIPQ96QV1 700 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 BHLHE41Q9C0J9 482 aaPredicted RBP8.16□□□□□ -1.1
TUBD1-208ENST00000588009 OSBPL2Q9H1P3 480 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 TLR6Q9Y2C9 796 aa8.16□□□□□ -1.1
TUBD1-208ENST00000588009 TMA7Q9Y2S6 64 aaKnown RBP8.16□□□□□ -1.1
TUBD1-208ENST00000588009 A0A096LPE4 126 aa8.15□□□□□ -1.1
TUBD1-208ENST00000588009 A0A1W2PPZ6 126 aa8.15□□□□□ -1.1
TUBD1-208ENST00000588009 GREM1O60565 184 aa8.15□□□□□ -1.1
TUBD1-208ENST00000588009 PF4P02776 101 aa8.15□□□□□ -1.1
TUBD1-208ENST00000588009 GARTP22102 1010 aa8.15□□□□□ -1.1
TUBD1-208ENST00000588009 CCDC155Q8N6L0 562 aa8.15□□□□□ -1.1
TUBD1-208ENST00000588009 TMEM102Q8N9M5 508 aaPredicted RBP8.15□□□□□ -1.1
TUBD1-208ENST00000588009 GMCL1Q96IK5 515 aa8.15□□□□□ -1.1
TUBD1-208ENST00000588009 NECAB3Q96P71 396 aaPredicted RBP8.15□□□□□ -1.1
TUBD1-208ENST00000588009 GINM1Q9NU53 330 aa8.15□□□□□ -1.1
TUBD1-208ENST00000588009 ATXN7L1Q9ULK2 861 aaPredicted RBP8.15□□□□□ -1.1
TUBD1-208ENST00000588009 SUPT16HQ9Y5B9 1047 aaKnown RBP8.15□□□□□ -1.1
TUBD1-208ENST00000588009 LOC102724428A0A0B4J2F2 783 aa8.14□□□□□ -1.11
TUBD1-208ENST00000588009 ZBTB42B2RXF5 422 aa8.14□□□□□ -1.11
TUBD1-208ENST00000588009 ENC1O14682 589 aa8.14□□□□□ -1.11
TUBD1-208ENST00000588009 VSIG8P0DPA2 414 aa8.14□□□□□ -1.11
TUBD1-208ENST00000588009 SOX9P48436 509 aa8.14□□□□□ -1.11
TUBD1-208ENST00000588009 SIK1P57059 783 aa8.14□□□□□ -1.11
TUBD1-208ENST00000588009 LMNB2Q03252 620 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms