RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 COPS6Q7L5N1 327 aa10.7□□□□□ -0.7
NEDD4L-218ENST00000587547 PSMD1Q99460 953 aa10.7□□□□□ -0.7
NEDD4L-218ENST00000587547 NOB1Q9ULX3 412 aaKnown RBP10.7□□□□□ -0.7
NEDD4L-218ENST00000587547 KIF16BQ96L93 1317 aa10.69□□□□□ -0.7
NEDD4L-218ENST00000587547 NOGQ13253 232 aa10.69□□□□□ -0.7
NEDD4L-218ENST00000587547 HABP4Q5JVS0 413 aaKnown RBP10.69□□□□□ -0.7
NEDD4L-218ENST00000587547 KIF6Q6ZMV9 814 aa10.69□□□□□ -0.7
NEDD4L-218ENST00000587547 MYH3P11055 1940 aa10.68□□□□□ -0.7
NEDD4L-218ENST00000587547 PLIN1O60240 522 aa10.68□□□□□ -0.7
NEDD4L-218ENST00000587547 DLK2Q6UY11 383 aa10.68□□□□□ -0.7
NEDD4L-218ENST00000587547 LRP10Q7Z4F1 713 aa10.68□□□□□ -0.7
NEDD4L-218ENST00000587547 DZIP3Q86Y13 1208 aaKnown RBP10.68□□□□□ -0.7
NEDD4L-218ENST00000587547 ZBTB3Q9H5J0 574 aa10.68□□□□□ -0.7
NEDD4L-218ENST00000587547 ADARB2Q9NS39 739 aaKnown RBP10.68□□□□□ -0.7
NEDD4L-218ENST00000587547 GPRC5DQ9NZD1 345 aa10.68□□□□□ -0.7
NEDD4L-218ENST00000587547 SUPT16HQ9Y5B9 1047 aaKnown RBP10.68□□□□□ -0.7
NEDD4L-218ENST00000587547 FAM177BA6PVY3 158 aa10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 FAM155AB1AL88 458 aaPredicted RBP10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 F6X3S4 739 aa10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 IPO8O15397 1037 aaKnown RBP10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 TRPA1O75762 1119 aa10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 DDX58O95786 925 aaKnown RBP10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 HUNKP57058 714 aa10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 ZKSCAN2Q63HK3 967 aa10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 RIC3Q7Z5B4 369 aa10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 LARGE2Q8N3Y3 721 aa10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 KRI1Q8N9T8 703 aaKnown RBP10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 SAGE1Q9NXZ1 904 aa10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 HPS5Q9UPZ3 1129 aa10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 TNNQ9UQP3 1299 aa10.67□□□□□ -0.7
NEDD4L-218ENST00000587547 PTPRCP08575 1304 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 PI4KAP2A4QPH2 592 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 POTEFA5A3E0 1075 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 GRXCR2A6NFK2 248 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 HIRAP54198 1017 aaPredicted RBP10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 RRP1P56182 461 aaKnown RBP10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 SLC4A10Q6U841 1118 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 KSR2Q6VAB6 950 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 ANKRD13DQ6ZTN6 518 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 CTU1Q7Z7A3 348 aaKnown RBP10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 PI4KAP1Q8N8J0 262 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 SLC39A7Q92504 469 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 CLUAP1Q96AJ1 413 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 GCC1Q96CN9 775 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 API5Q9BZZ5 524 aaKnown RBP10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 RNF186Q9NXI6 227 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 MAP3K2Q9Y2U5 619 aa10.66□□□□□ -0.7
NEDD4L-218ENST00000587547 TRIM27P14373 513 aa10.65□□□□□ -0.7
NEDD4L-218ENST00000587547 ALDH1B1P30837 517 aa10.65□□□□□ -0.7
NEDD4L-218ENST00000587547 ATF7IPQ6VMQ6 1270 aa10.65□□□□□ -0.7
NEDD4L-218ENST00000587547 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.7
NEDD4L-218ENST00000587547 NIM1KQ8IY84 436 aa10.65□□□□□ -0.7
NEDD4L-218ENST00000587547 PLBD2Q8NHP8 589 aa10.65□□□□□ -0.7
NEDD4L-218ENST00000587547 TRPM4Q8TD43 1214 aa10.65□□□□□ -0.7
NEDD4L-218ENST00000587547 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
NEDD4L-218ENST00000587547 PGAP2Q9UHJ9 254 aa10.65□□□□□ -0.7
NEDD4L-218ENST00000587547 ABCC12Q96J65 1359 aa10.65□□□□□ -0.71
NEDD4L-218ENST00000587547 GMPSP49915 693 aaPredicted RBP10.64□□□□□ -0.71
NEDD4L-218ENST00000587547 KIF23Q02241 960 aaPredicted RBP10.64□□□□□ -0.71
NEDD4L-218ENST00000587547 HLFQ16534 295 aa10.64□□□□□ -0.71
NEDD4L-218ENST00000587547 CLEC4GQ6UXB4 293 aa10.64□□□□□ -0.71
NEDD4L-218ENST00000587547 TPTE2Q6XPS3 522 aa10.64□□□□□ -0.71
NEDD4L-218ENST00000587547 DNAAF4Q8WXU2 420 aa10.64□□□□□ -0.71
NEDD4L-218ENST00000587547 ARHGAP45Q92619 1136 aa10.64□□□□□ -0.71
NEDD4L-218ENST00000587547 MYD88Q99836 296 aa10.64□□□□□ -0.71
NEDD4L-218ENST00000587547 NIP7Q9Y221 180 aaKnown RBP eCLIP10.64□□□□□ -0.71
NEDD4L-218ENST00000587547 LAMB2P55268 1798 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 SHTN1A0MZ66 631 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 ATP5J2-PTCD1G3V325 749 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 GPR37O15354 613 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 C7P10643 843 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 GPTP24298 496 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 FXR1P51114 621 aaKnown RBP eCLIP10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 CXCL9Q07325 125 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 CRY2Q49AN0 593 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 C20orf194Q5TEA3 1177 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 CC2D2BQ6DHV5 1058 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 RGMBQ6NW40 437 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 USP48Q86UV5 1035 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 DZIP1LQ8IYY4 767 aaKnown RBP10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 METTL22Q9BUU2 404 aaPredicted RBP10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 ZNF652Q9Y2D9 606 aa10.63□□□□□ -0.71
NEDD4L-218ENST00000587547 MKI67P46013 3256 aaKnown RBP10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 ABCC4O15439 1325 aa10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 ERVV-1B6SEH8 477 aa10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 PPIP5K2O43314 1243 aa10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 MS4A1P11836 297 aa10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 RLBP1P12271 317 aa10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 IRX6P78412 446 aaPredicted RBP10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 NEXNQ0ZGT2 675 aa10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 AOC3Q16853 763 aa10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 GIGYF2Q6Y7W6 1299 aaKnown RBP10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 CDC37L1Q7L3B6 337 aa10.62□□□□□ -0.71
NEDD4L-218ENST00000587547 DDX60Q8IY21 1712 aaKnown RBP10.61□□□□□ -0.71
NEDD4L-218ENST00000587547 SPEF2Q9C093 1822 aa10.61□□□□□ -0.71
NEDD4L-218ENST00000587547 TCIRG1Q13488 830 aa10.61□□□□□ -0.71
NEDD4L-218ENST00000587547 CWF19L2Q2TBE0 894 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms