RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 C7orf43Q8WVR3 580 aa12.65□□□□□ -0.38
CLPTM1-207ENST00000587537 NEUROD6Q96NK8 337 aa12.65□□□□□ -0.38
CLPTM1-207ENST00000587537 RTFDC1Q9BY42 306 aaPredicted RBP12.65□□□□□ -0.38
CLPTM1-207ENST00000587537 MED23Q9ULK4 1368 aa12.65□□□□□ -0.38
CLPTM1-207ENST00000587537 PDS5AQ29RF7 1337 aaKnown RBP12.64□□□□□ -0.39
CLPTM1-207ENST00000587537 SMARCA5O60264 1052 aaPredicted RBP12.64□□□□□ -0.39
CLPTM1-207ENST00000587537 ATP5JP18859 108 aa12.64□□□□□ -0.39
CLPTM1-207ENST00000587537 PDE1AP54750 535 aa12.64□□□□□ -0.39
CLPTM1-207ENST00000587537 TMED8Q6PL24 325 aaPredicted RBP12.64□□□□□ -0.39
CLPTM1-207ENST00000587537 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
CLPTM1-207ENST00000587537 PSMD1Q99460 953 aa12.64□□□□□ -0.39
CLPTM1-207ENST00000587537 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
CLPTM1-207ENST00000587537 DUOX1Q9NRD9 1551 aa12.64□□□□□ -0.39
CLPTM1-207ENST00000587537 UFL1O94874 794 aa12.63□□□□□ -0.39
CLPTM1-207ENST00000587537 ZNF804AQ7Z570 1209 aa12.63□□□□□ -0.39
CLPTM1-207ENST00000587537 VPS37DQ86XT2 251 aa12.63□□□□□ -0.39
CLPTM1-207ENST00000587537 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
CLPTM1-207ENST00000587537 XAGE2Q96GT9 111 aa12.63□□□□□ -0.39
CLPTM1-207ENST00000587537 FHDC1Q9C0D6 1143 aaPredicted RBP12.63□□□□□ -0.39
CLPTM1-207ENST00000587537 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
CLPTM1-207ENST00000587537 DBNLQ9UJU6 430 aaKnown RBP12.63□□□□□ -0.39
CLPTM1-207ENST00000587537 COL4A1P02462 1669 aa12.63□□□□□ -0.39
CLPTM1-207ENST00000587537 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
CLPTM1-207ENST00000587537 TAF5LO75529 589 aa12.62□□□□□ -0.39
CLPTM1-207ENST00000587537 TIMM10P62072 90 aa12.62□□□□□ -0.39
CLPTM1-207ENST00000587537 GPSM2P81274 684 aa12.62□□□□□ -0.39
CLPTM1-207ENST00000587537 LRRFIP1Q32MZ4 808 aaKnown RBP12.62□□□□□ -0.39
CLPTM1-207ENST00000587537 BMP2KLQ5H9B9 411 aa12.62□□□□□ -0.39
CLPTM1-207ENST00000587537 TTC39AQ5SRH9 613 aa12.62□□□□□ -0.39
CLPTM1-207ENST00000587537 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
CLPTM1-207ENST00000587537 TBC1D16Q8TBP0 767 aa12.62□□□□□ -0.39
CLPTM1-207ENST00000587537 ZC3H12CQ9C0D7 883 aaKnown RBP12.62□□□□□ -0.39
CLPTM1-207ENST00000587537 C6orf229H3BNL8 230 aa12.61□□□□□ -0.39
CLPTM1-207ENST00000587537 PDE4AP27815 886 aa12.61□□□□□ -0.39
CLPTM1-207ENST00000587537 ARID4AP29374 1257 aaPredicted RBP12.61□□□□□ -0.39
CLPTM1-207ENST00000587537 HIBADHP31937 336 aaKnown RBP12.61□□□□□ -0.39
CLPTM1-207ENST00000587537 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
CLPTM1-207ENST00000587537 DBNDD2Q9BQY9 259 aa12.61□□□□□ -0.39
CLPTM1-207ENST00000587537 SYT17Q9BSW7 474 aa12.61□□□□□ -0.39
CLPTM1-207ENST00000587537 CCDC8Q9H0W5 538 aaPredicted RBP12.61□□□□□ -0.39
CLPTM1-207ENST00000587537 FER1L6Q2WGJ9 1857 aa12.61□□□□□ -0.39
CLPTM1-207ENST00000587537 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
CLPTM1-207ENST00000587537 MYH13Q9UKX3 1938 aa12.6□□□□□ -0.39
CLPTM1-207ENST00000587537 C21orf2O43822 256 aa12.6□□□□□ -0.39
CLPTM1-207ENST00000587537 RGS3P49796 1198 aa12.6□□□□□ -0.39
CLPTM1-207ENST00000587537 FKBP4Q02790 459 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLPTM1-207ENST00000587537 WASHC4Q2M389 1173 aa12.6□□□□□ -0.39
CLPTM1-207ENST00000587537 TTC22Q5TAA0 569 aa12.6□□□□□ -0.39
CLPTM1-207ENST00000587537 CCDC102BQ68D86 513 aa12.6□□□□□ -0.39
CLPTM1-207ENST00000587537 FBXO33Q7Z6M2 555 aa12.6□□□□□ -0.39
CLPTM1-207ENST00000587537 COA1Q9GZY4 146 aa12.6□□□□□ -0.39
CLPTM1-207ENST00000587537 DENND2AQ9ULE3 1009 aa12.6□□□□□ -0.39
CLPTM1-207ENST00000587537 RFX7Q2KHR2 1363 aa12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 HIP1O00291 1037 aa12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 PODNQ7Z5L7 613 aa12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 CNTROBQ8N137 903 aa12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 ZGPATQ8N5A5 531 aaKnown RBP12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 PI4K2BQ8TCG2 481 aa12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 FAM84BQ96KN1 310 aaPredicted RBP12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 HAUS7Q99871 368 aa12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 POLLQ9UGP5 575 aa12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 IRS2Q9Y4H2 1338 aa12.59□□□□□ -0.39
CLPTM1-207ENST00000587537 AK9Q5TCS8 1911 aa12.58□□□□□ -0.39
CLPTM1-207ENST00000587537 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 G3V3G9 751 aa12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 IL1R1P14778 569 aa12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 KIAA2012Q0VF49 1180 aa12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 CASC1Q6TDU7 716 aa12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 TBC1D22AQ8WUA7 517 aa12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 TAOK3Q9H2K8 898 aa12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 TLR7Q9NYK1 1049 aaKnown RBP12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 BCS1LQ9Y276 419 aa12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.58□□□□□ -0.4
CLPTM1-207ENST00000587537 FRAT2O75474 233 aaPredicted RBP12.57□□□□□ -0.4
CLPTM1-207ENST00000587537 ADORA1P30542 326 aa12.57□□□□□ -0.4
CLPTM1-207ENST00000587537 NLGN2Q8NFZ4 835 aa12.57□□□□□ -0.4
CLPTM1-207ENST00000587537 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
CLPTM1-207ENST00000587537 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
CLPTM1-207ENST00000587537 AKAP11Q9UKA4 1901 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 GRIN3BO60391 1043 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 ZFYP08048 801 aaPredicted RBP12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 PHKA1P46020 1223 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 MMP14P50281 582 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 BCAMP50895 628 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 FKBP1AP62942 108 aaKnown RBP12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 SPTY2D1Q68D10 685 aaPredicted RBP12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 ZSCAN25Q6NSZ9 544 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 SPATA5Q8NB90 893 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 TDRD7Q8NHU6 1098 aaKnown RBP12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 CD209Q9NNX6 404 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 PAG1Q9NWQ8 432 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 SUGT1Q9Y2Z0 365 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 SALL1Q9NSC2 1324 aa12.56□□□□□ -0.4
CLPTM1-207ENST00000587537 CHD4Q14839 1912 aa12.55□□□□□ -0.4
CLPTM1-207ENST00000587537 TRIM6-TRIM34B2RNG4 842 aa12.55□□□□□ -0.4
CLPTM1-207ENST00000587537 GYG1P46976 350 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms