RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 KANSL3Q9P2N6 904 aa8.27□□□□□ -1.09
VMP1-205ENST00000587470 IREB2P48200 963 aaKnown RBP8.26□□□□□ -1.09
VMP1-205ENST00000587470 EHHADHQ08426 723 aa8.26□□□□□ -1.09
VMP1-205ENST00000587470 TMEM130Q8N3G9 435 aa8.26□□□□□ -1.09
VMP1-205ENST00000587470 LACRTQ9GZZ8 138 aa8.26□□□□□ -1.09
VMP1-205ENST00000587470 MRPL18Q9H0U6 180 aaKnown RBP8.26□□□□□ -1.09
VMP1-205ENST00000587470 ZFP64Q9NPA5 681 aa8.26□□□□□ -1.09
VMP1-205ENST00000587470 FZD6O60353 706 aa8.25□□□□□ -1.09
VMP1-205ENST00000587470 NOS3P29474 1203 aa8.25□□□□□ -1.09
VMP1-205ENST00000587470 TP53INP1Q96A56 240 aa8.25□□□□□ -1.09
VMP1-205ENST00000587470 POP1Q99575 1024 aaKnown RBP8.25□□□□□ -1.09
VMP1-205ENST00000587470 ANO2Q9NQ90 1003 aa8.25□□□□□ -1.09
VMP1-205ENST00000587470 EGFL7Q9UHF1 273 aa8.25□□□□□ -1.09
VMP1-205ENST00000587470 SCO2A0A1W2PP80 73 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 FAM177BA6PVY3 158 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 LINC01387J3KSC0 135 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 TNFRSF21O75509 655 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 PTPRAP18433 802 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 PDE4CQ08493 712 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 ZNF211Q13398 564 aaPredicted RBP8.24□□□□□ -1.09
VMP1-205ENST00000587470 KRTAP4-12Q9BQ66 201 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 ADAM19Q9H013 955 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 CHRDQ9H2X0 955 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 AKTIPQ9H8T0 292 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.24□□□□□ -1.09
VMP1-205ENST00000587470 ABCC9O60706 1549 aa8.24□□□□□ -1.09
VMP1-205ENST00000587470 ICMTO60725 284 aa8.23□□□□□ -1.09
VMP1-205ENST00000587470 FAM117BQ6P1L5 589 aa8.23□□□□□ -1.09
VMP1-205ENST00000587470 ADAMTSL4Q6UY14 1074 aa8.23□□□□□ -1.09
VMP1-205ENST00000587470 DZANK1Q9NVP4 752 aa8.23□□□□□ -1.09
VMP1-205ENST00000587470 NFKBIEO00221 500 aa8.22□□□□□ -1.09
VMP1-205ENST00000587470 PHACTR2O75167 634 aa8.22□□□□□ -1.09
VMP1-205ENST00000587470 LRP8Q14114 963 aa8.22□□□□□ -1.09
VMP1-205ENST00000587470 GALNT11Q8NCW6 608 aa8.22□□□□□ -1.09
VMP1-205ENST00000587470 SNX29Q8TEQ0 813 aa8.22□□□□□ -1.09
VMP1-205ENST00000587470 SH2B1Q9NRF2 756 aaPredicted RBP8.22□□□□□ -1.09
VMP1-205ENST00000587470 CCDC87Q9NVE4 849 aa8.22□□□□□ -1.09
VMP1-205ENST00000587470 F8W735 103 aaPredicted RBP8.21□□□□□ -1.1
VMP1-205ENST00000587470 FSCN2O14926 492 aa8.21□□□□□ -1.1
VMP1-205ENST00000587470 EPHA1P21709 976 aa8.21□□□□□ -1.1
VMP1-205ENST00000587470 CDC25BP30305 580 aa8.21□□□□□ -1.1
VMP1-205ENST00000587470 CD68P34810 354 aaPredicted RBP8.21□□□□□ -1.1
VMP1-205ENST00000587470 TXNDC11Q6PKC3 985 aa8.21□□□□□ -1.1
VMP1-205ENST00000587470 GJD3Q8N144 294 aa8.21□□□□□ -1.1
VMP1-205ENST00000587470 KLHL23Q8NBE8 558 aa8.21□□□□□ -1.1
VMP1-205ENST00000587470 MEGF10Q96KG7 1140 aa8.21□□□□□ -1.1
VMP1-205ENST00000587470 PDE2AO00408 941 aaPredicted RBP8.2□□□□□ -1.1
VMP1-205ENST00000587470 EREGO14944 169 aa8.2□□□□□ -1.1
VMP1-205ENST00000587470 HYAL3O43820 417 aaPredicted RBP8.2□□□□□ -1.1
VMP1-205ENST00000587470 ALX3O95076 343 aa8.2□□□□□ -1.1
VMP1-205ENST00000587470 EDN3P14138 238 aa8.2□□□□□ -1.1
VMP1-205ENST00000587470 ACPPP15309 386 aa8.2□□□□□ -1.1
VMP1-205ENST00000587470 SERPINB4P48594 390 aa8.2□□□□□ -1.1
VMP1-205ENST00000587470 CABP4P57796 275 aa8.2□□□□□ -1.1
VMP1-205ENST00000587470 DZIP1LQ8IYY4 767 aaKnown RBP8.2□□□□□ -1.1
VMP1-205ENST00000587470 TIMELESSQ9UNS1 1208 aa8.2□□□□□ -1.1
VMP1-205ENST00000587470 TM4SF5O14894 197 aa8.19□□□□□ -1.1
VMP1-205ENST00000587470 GLYCTKQ8IVS8 523 aa8.19□□□□□ -1.1
VMP1-205ENST00000587470 TMEM102Q8N9M5 508 aaPredicted RBP8.19□□□□□ -1.1
VMP1-205ENST00000587470 RETREG2Q8NC44 543 aa8.19□□□□□ -1.1
VMP1-205ENST00000587470 WNT8BQ93098 351 aa8.19□□□□□ -1.1
VMP1-205ENST00000587470 OSMRQ99650 979 aa8.19□□□□□ -1.1
VMP1-205ENST00000587470 FOXD3Q9UJU5 478 aaPredicted RBP8.19□□□□□ -1.1
VMP1-205ENST00000587470 H3BRB1 525 aa8.18□□□□□ -1.1
VMP1-205ENST00000587470 H3BRJ5 948 aa8.18□□□□□ -1.1
VMP1-205ENST00000587470 TRPA1O75762 1119 aa8.18□□□□□ -1.1
VMP1-205ENST00000587470 ECM1Q16610 540 aa8.18□□□□□ -1.1
VMP1-205ENST00000587470 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
VMP1-205ENST00000587470 NXPE3Q969Y0 559 aa8.18□□□□□ -1.1
VMP1-205ENST00000587470 CARD10Q9BWT7 1032 aa8.18□□□□□ -1.1
VMP1-205ENST00000587470 TUT1Q9H6E5 874 aaKnown RBP8.18□□□□□ -1.1
VMP1-205ENST00000587470 SEC31BQ9NQW1 1179 aa8.18□□□□□ -1.1
VMP1-205ENST00000587470 BRPF3Q9ULD4 1205 aa8.18□□□□□ -1.1
VMP1-205ENST00000587470 PIP4K2BP78356 416 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 Q6ZS46 218 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 TXNDC2Q86VQ3 553 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 KRTAP1-3Q8IUG1 177 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 KLHDC7BQ96G42 594 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 HHIPQ96QV1 700 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 ZKSCAN3Q9BRR0 538 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 ZFYVE28Q9HCC9 887 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 OSGEPQ9NPF4 335 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 KCNK4Q9NYG8 393 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 AMOTL2Q9Y2J4 779 aa8.17□□□□□ -1.1
VMP1-205ENST00000587470 DUOXA2Q1HG44 320 aa8.16□□□□□ -1.1
VMP1-205ENST00000587470 AGGF1Q8N302 714 aaeCLIP8.16□□□□□ -1.1
VMP1-205ENST00000587470 SOX13Q9UN79 622 aa8.16□□□□□ -1.1
VMP1-205ENST00000587470 GLB1P16278 677 aa8.15□□□□□ -1.1
VMP1-205ENST00000587470 ARHGAP4P98171 946 aa8.15□□□□□ -1.1
VMP1-205ENST00000587470 PRR23CQ6ZRP0 262 aa8.15□□□□□ -1.1
VMP1-205ENST00000587470 ACAD11Q709F0 780 aa8.15□□□□□ -1.1
VMP1-205ENST00000587470 BSNDQ8WZ55 320 aa8.15□□□□□ -1.1
VMP1-205ENST00000587470 NDUFB5O43674 189 aa8.14□□□□□ -1.11
VMP1-205ENST00000587470 WISP1O95388 367 aa8.14□□□□□ -1.11
VMP1-205ENST00000587470 NEFLP07196 543 aa8.14□□□□□ -1.11
VMP1-205ENST00000587470 ARL4DP49703 201 aa8.14□□□□□ -1.11
VMP1-205ENST00000587470 PEAR1Q5VY43 1037 aaPredicted RBP8.14□□□□□ -1.11
VMP1-205ENST00000587470 CCER1Q8TC90 406 aaPredicted RBP8.14□□□□□ -1.11
VMP1-205ENST00000587470 CEP41Q9BYV8 373 aa8.14□□□□□ -1.11
VMP1-205ENST00000587470 RNF112Q9ULX5 631 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms