RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 GGA1Q9UJY5 639 aa18.29■□□□□ 0.52
NFIX-208ENST00000587260 MYH13Q9UKX3 1938 aa18.29■□□□□ 0.52
NFIX-208ENST00000587260 AOX1Q06278 1338 aa18.29■□□□□ 0.52
NFIX-208ENST00000587260 C6orf229H3BNL8 230 aa18.28■□□□□ 0.52
NFIX-208ENST00000587260 SLC5A1P13866 664 aa18.28■□□□□ 0.52
NFIX-208ENST00000587260 MX1P20591 662 aa18.28■□□□□ 0.52
NFIX-208ENST00000587260 TBC1D16Q8TBP0 767 aa18.28■□□□□ 0.52
NFIX-208ENST00000587260 LPIN2Q92539 896 aa18.28■□□□□ 0.52
NFIX-208ENST00000587260 DBNDD2Q9BQY9 259 aa18.28■□□□□ 0.52
NFIX-208ENST00000587260 PODXL2Q9NZ53 605 aa18.28■□□□□ 0.52
NFIX-208ENST00000587260 DBNLQ9UJU6 430 aaKnown RBP18.28■□□□□ 0.52
NFIX-208ENST00000587260 ATP2B4P23634 1241 aa18.28■□□□□ 0.52
NFIX-208ENST00000587260 UBE4AQ14139 1066 aa18.28■□□□□ 0.52
NFIX-208ENST00000587260 POLLQ9UGP5 575 aa18.28■□□□□ 0.52
NFIX-208ENST00000587260 TTC41PQ6P2S7 1318 aa18.27■□□□□ 0.52
NFIX-208ENST00000587260 IFIT1P09914 478 aaKnown RBP18.27■□□□□ 0.51
NFIX-208ENST00000587260 TSHZ3Q63HK5 1081 aa18.27■□□□□ 0.51
NFIX-208ENST00000587260 CC2D2BQ6DHV5 1058 aa18.27■□□□□ 0.51
NFIX-208ENST00000587260 XAGE2Q96GT9 111 aa18.27■□□□□ 0.51
NFIX-208ENST00000587260 LEMD3Q9Y2U8 911 aa18.27■□□□□ 0.51
NFIX-208ENST00000587260 BMP2KLQ5H9B9 411 aa18.26■□□□□ 0.51
NFIX-208ENST00000587260 SOGA3Q5TF21 947 aa18.26■□□□□ 0.51
NFIX-208ENST00000587260 GYG1P46976 350 aa18.25■□□□□ 0.51
NFIX-208ENST00000587260 GORABQ5T7V8 394 aa18.25■□□□□ 0.51
NFIX-208ENST00000587260 TTC22Q5TAA0 569 aa18.25■□□□□ 0.51
NFIX-208ENST00000587260 TXNRD3Q86VQ6 643 aa18.25■□□□□ 0.51
NFIX-208ENST00000587260 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
NFIX-208ENST00000587260 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
NFIX-208ENST00000587260 RIMBP2O15034 1052 aa18.24■□□□□ 0.51
NFIX-208ENST00000587260 ECHDC1Q9NTX5 307 aa18.24■□□□□ 0.51
NFIX-208ENST00000587260 IRS2Q9Y4H2 1338 aa18.24■□□□□ 0.51
NFIX-208ENST00000587260 CCDC88AQ3V6T2 1871 aa18.24■□□□□ 0.51
NFIX-208ENST00000587260 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
NFIX-208ENST00000587260 GPATCH3Q96I76 525 aa18.23■□□□□ 0.51
NFIX-208ENST00000587260 PHKA1P46020 1223 aa18.23■□□□□ 0.51
NFIX-208ENST00000587260 BCAMP50895 628 aa18.23■□□□□ 0.51
NFIX-208ENST00000587260 FKBP4Q02790 459 aaKnown RBP eCLIP18.23■□□□□ 0.51
NFIX-208ENST00000587260 RASSF7Q02833 373 aa18.23■□□□□ 0.51
NFIX-208ENST00000587260 PI4K2BQ8TCG2 481 aa18.23■□□□□ 0.51
NFIX-208ENST00000587260 EYA3Q99504 573 aa18.23■□□□□ 0.51
NFIX-208ENST00000587260 TAOK3Q9H2K8 898 aa18.23■□□□□ 0.51
NFIX-208ENST00000587260 NFKBIEO00221 500 aa18.22■□□□□ 0.51
NFIX-208ENST00000587260 ERC2O15083 957 aa18.22■□□□□ 0.51
NFIX-208ENST00000587260 GSPT1P15170 499 aaKnown RBP18.22■□□□□ 0.51
NFIX-208ENST00000587260 AOC3Q16853 763 aa18.22■□□□□ 0.51
NFIX-208ENST00000587260 WASHC4Q2M389 1173 aa18.22■□□□□ 0.51
NFIX-208ENST00000587260 GRIPAP1Q4V328 841 aa18.22■□□□□ 0.51
NFIX-208ENST00000587260 CAVIN4Q5BKX8 364 aa18.22■□□□□ 0.51
NFIX-208ENST00000587260 TTC39AQ5SRH9 613 aa18.22■□□□□ 0.51
NFIX-208ENST00000587260 CCDC102BQ68D86 513 aa18.22■□□□□ 0.51
NFIX-208ENST00000587260 VPS37DQ86XT2 251 aa18.22■□□□□ 0.51
NFIX-208ENST00000587260 PSMD1Q99460 953 aa18.22■□□□□ 0.51
NFIX-208ENST00000587260 RTFDC1Q9BY42 306 aaPredicted RBP18.22■□□□□ 0.51
NFIX-208ENST00000587260 ZNF277Q9NRM2 450 aaPredicted RBP18.22■□□□□ 0.51
NFIX-208ENST00000587260 GLRX3O76003 335 aaKnown RBP18.21■□□□□ 0.51
NFIX-208ENST00000587260 CCDC158Q5M9N0 1113 aa18.21■□□□□ 0.51
NFIX-208ENST00000587260 SUPT20HQ8NEM7 779 aa18.21■□□□□ 0.51
NFIX-208ENST00000587260 IQSEC3Q9UPP2 1182 aaPredicted RBP18.21■□□□□ 0.51
NFIX-208ENST00000587260 COL4A5P29400 1685 aa18.21■□□□□ 0.51
NFIX-208ENST00000587260 AKAP11Q9UKA4 1901 aa18.21■□□□□ 0.51
NFIX-208ENST00000587260 AK9Q5TCS8 1911 aa18.2■□□□□ 0.5
NFIX-208ENST00000587260 PPIP5K2O43314 1243 aa18.2■□□□□ 0.5
NFIX-208ENST00000587260 ATP5JP18859 108 aa18.2■□□□□ 0.5
NFIX-208ENST00000587260 FAM84BQ96KN1 310 aaPredicted RBP18.2■□□□□ 0.5
NFIX-208ENST00000587260 ZC3H12CQ9C0D7 883 aaKnown RBP18.2■□□□□ 0.5
NFIX-208ENST00000587260 COL1A1P02452 1464 aaPredicted RBP18.2■□□□□ 0.5
NFIX-208ENST00000587260 CHD4Q14839 1912 aa18.2■□□□□ 0.5
NFIX-208ENST00000587260 HIBADHP31937 336 aaKnown RBP18.19■□□□□ 0.5
NFIX-208ENST00000587260 GPR162Q16538 588 aa18.19■□□□□ 0.5
NFIX-208ENST00000587260 DOK7Q18PE1 504 aa18.19■□□□□ 0.5
NFIX-208ENST00000587260 ARHGAP27Q6ZUM4 889 aa18.19■□□□□ 0.5
NFIX-208ENST00000587260 C15orf52Q6ZUT6 534 aaKnown RBP18.19■□□□□ 0.5
NFIX-208ENST00000587260 ZNF804AQ7Z570 1209 aa18.19■□□□□ 0.5
NFIX-208ENST00000587260 SBF1O95248 1867 aa18.19■□□□□ 0.5
NFIX-208ENST00000587260 TIAM2Q8IVF5 1701 aa18.19■□□□□ 0.5
NFIX-208ENST00000587260 SCARF1Q14162 830 aa18.18■□□□□ 0.5
NFIX-208ENST00000587260 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.18■□□□□ 0.5
NFIX-208ENST00000587260 DBNDD1Q9H9R9 158 aa18.18■□□□□ 0.5
NFIX-208ENST00000587260 NDUFB9Q9Y6M9 179 aa18.18■□□□□ 0.5
NFIX-208ENST00000587260 UTRNP46939 3433 aa18.18■□□□□ 0.5
NFIX-208ENST00000587260 KIAA2012Q0VF49 1180 aa18.18■□□□□ 0.5
NFIX-208ENST00000587260 PI16Q6UXB8 463 aa18.18■□□□□ 0.5
NFIX-208ENST00000587260 FBXO33Q7Z6M2 555 aa18.18■□□□□ 0.5
NFIX-208ENST00000587260 ZNF512BQ96KM6 892 aaPredicted RBP18.18■□□□□ 0.5
NFIX-208ENST00000587260 BOLA2Q9H3K6 86 aa18.18■□□□□ 0.5
NFIX-208ENST00000587260 SCN9AQ15858 1988 aa18.17■□□□□ 0.5
NFIX-208ENST00000587260 ZNF646O15015 1829 aaPredicted RBP18.17■□□□□ 0.5
NFIX-208ENST00000587260 G3V3G9 751 aa18.17■□□□□ 0.5
NFIX-208ENST00000587260 FRAT2O75474 233 aaPredicted RBP18.17■□□□□ 0.5
NFIX-208ENST00000587260 MAP4K4O95819 1239 aaPredicted RBP18.17■□□□□ 0.5
NFIX-208ENST00000587260 SDSP20132 328 aa18.17■□□□□ 0.5
NFIX-208ENST00000587260 ARID4AP29374 1257 aaPredicted RBP18.17■□□□□ 0.5
NFIX-208ENST00000587260 IARSP41252 1262 aaKnown RBP18.17■□□□□ 0.5
NFIX-208ENST00000587260 MCAMP43121 646 aa18.17■□□□□ 0.5
NFIX-208ENST00000587260 RASGRF1Q13972 1273 aa18.17■□□□□ 0.5
NFIX-208ENST00000587260 DCAF8Q5TAQ9 597 aa18.17■□□□□ 0.5
NFIX-208ENST00000587260 LARGE2Q8N3Y3 721 aa18.17■□□□□ 0.5
NFIX-208ENST00000587260 DNAJC2Q99543 621 aaKnown RBP18.17■□□□□ 0.5
NFIX-208ENST00000587260 SNRKQ9NRH2 765 aa18.17■□□□□ 0.5
NFIX-208ENST00000587260 JAG2Q9Y219 1238 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms