RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 BEND3Q5T5X7 828 aa13.51□□□□□ -0.25
ZNF540-205ENST00000587220 SAPCD2Q86UD0 394 aa13.51□□□□□ -0.25
ZNF540-205ENST00000587220 SULF1Q8IWU6 871 aa13.51□□□□□ -0.25
ZNF540-205ENST00000587220 WTIPA6NIX2 430 aaPredicted RBP13.5□□□□□ -0.25
ZNF540-205ENST00000587220 GRM8O00222 908 aa13.5□□□□□ -0.25
ZNF540-205ENST00000587220 OGFOD1Q8N543 542 aa13.5□□□□□ -0.25
ZNF540-205ENST00000587220 COA1Q9GZY4 146 aa13.5□□□□□ -0.25
ZNF540-205ENST00000587220 WBP1LQ9NX94 342 aa13.5□□□□□ -0.25
ZNF540-205ENST00000587220 GGA3Q9NZ52 723 aa13.5□□□□□ -0.25
ZNF540-205ENST00000587220 ZNF609O15014 1411 aa13.49□□□□□ -0.25
ZNF540-205ENST00000587220 ZNF521Q96K83 1311 aa13.49□□□□□ -0.25
ZNF540-205ENST00000587220 ADM5C9JUS6 153 aa13.49□□□□□ -0.25
ZNF540-205ENST00000587220 E9PSI1 815 aa13.49□□□□□ -0.25
ZNF540-205ENST00000587220 CAPN15O75808 1086 aa13.49□□□□□ -0.25
ZNF540-205ENST00000587220 CCDC57Q2TAC2 916 aa13.49□□□□□ -0.25
ZNF540-205ENST00000587220 HHIPL1Q96JK4 782 aa13.49□□□□□ -0.25
ZNF540-205ENST00000587220 SRCIN1Q9C0H9 1055 aa13.49□□□□□ -0.25
ZNF540-205ENST00000587220 MYOZ2Q9NPC6 264 aa13.49□□□□□ -0.25
ZNF540-205ENST00000587220 MYO3BQ8WXR4 1341 aa13.48□□□□□ -0.25
ZNF540-205ENST00000587220 ALDH1L1O75891 902 aa13.48□□□□□ -0.25
ZNF540-205ENST00000587220 HUNKP57058 714 aa13.48□□□□□ -0.25
ZNF540-205ENST00000587220 ZNF280AP59817 542 aaPredicted RBP13.48□□□□□ -0.25
ZNF540-205ENST00000587220 FOXO4P98177 505 aa13.48□□□□□ -0.25
ZNF540-205ENST00000587220 CHRNDQ07001 517 aa13.48□□□□□ -0.25
ZNF540-205ENST00000587220 SCARF1Q14162 830 aa13.48□□□□□ -0.25
ZNF540-205ENST00000587220 LMBR1LQ6UX01 489 aa13.48□□□□□ -0.25
ZNF540-205ENST00000587220 C2orf69Q8N8R5 385 aa13.48□□□□□ -0.25
ZNF540-205ENST00000587220 PRDM10Q9NQV6 1147 aa13.48□□□□□ -0.25
ZNF540-205ENST00000587220 THSD7BQ9C0I4 1608 aa13.48□□□□□ -0.25
ZNF540-205ENST00000587220 POLR2AP24928 1970 aaKnown RBP13.48□□□□□ -0.25
ZNF540-205ENST00000587220 MAP2K2P36507 400 aa13.47□□□□□ -0.25
ZNF540-205ENST00000587220 LBX1P52954 281 aa13.47□□□□□ -0.25
ZNF540-205ENST00000587220 STRIP1Q5VSL9 837 aa13.47□□□□□ -0.25
ZNF540-205ENST00000587220 ANGEL2Q5VTE6 544 aaKnown RBP13.47□□□□□ -0.25
ZNF540-205ENST00000587220 DLK2Q6UY11 383 aa13.47□□□□□ -0.25
ZNF540-205ENST00000587220 ASTN2O75129 1339 aaPredicted RBP13.46□□□□□ -0.25
ZNF540-205ENST00000587220 AOC2O75106 756 aa13.46□□□□□ -0.25
ZNF540-205ENST00000587220 TAF5LO75529 589 aa13.46□□□□□ -0.25
ZNF540-205ENST00000587220 KLRK1P26718 216 aa13.46□□□□□ -0.25
ZNF540-205ENST00000587220 DACT2Q5SW24 774 aa13.46□□□□□ -0.25
ZNF540-205ENST00000587220 TTLL5Q6EMB2 1281 aa13.46□□□□□ -0.25
ZNF540-205ENST00000587220 LDHAL6AQ6ZMR3 332 aa13.46□□□□□ -0.25
ZNF540-205ENST00000587220 TXNRD3Q86VQ6 643 aa13.46□□□□□ -0.25
ZNF540-205ENST00000587220 HELBQ8NG08 1087 aaPredicted RBP13.46□□□□□ -0.25
ZNF540-205ENST00000587220 GMLQ99445 158 aa13.46□□□□□ -0.25
ZNF540-205ENST00000587220 GBA2Q9HCG7 927 aaPredicted RBP13.46□□□□□ -0.25
ZNF540-205ENST00000587220 CNNM1Q9NRU3 951 aa13.46□□□□□ -0.25
ZNF540-205ENST00000587220 PLIN1O60240 522 aa13.45□□□□□ -0.26
ZNF540-205ENST00000587220 GTF2IP78347 998 aa13.45□□□□□ -0.26
ZNF540-205ENST00000587220 EPHA10Q5JZY3 1008 aa13.45□□□□□ -0.26
ZNF540-205ENST00000587220 ZNF804AQ7Z570 1209 aa13.45□□□□□ -0.26
ZNF540-205ENST00000587220 CDCA5Q96FF9 252 aa13.45□□□□□ -0.26
ZNF540-205ENST00000587220 MXD3Q9BW11 206 aa13.45□□□□□ -0.26
ZNF540-205ENST00000587220 HDAC9Q9UKV0 1011 aa13.45□□□□□ -0.26
ZNF540-205ENST00000587220 PTPRCP08575 1304 aa13.44□□□□□ -0.26
ZNF540-205ENST00000587220 HSPA8P11142 646 aaKnown RBP13.44□□□□□ -0.26
ZNF540-205ENST00000587220 NOGQ13253 232 aa13.44□□□□□ -0.26
ZNF540-205ENST00000587220 RGMBQ6NW40 437 aa13.44□□□□□ -0.26
ZNF540-205ENST00000587220 KIAA0825Q8IV33 1275 aa13.44□□□□□ -0.26
ZNF540-205ENST00000587220 MRPL50Q8N5N7 158 aaKnown RBP13.44□□□□□ -0.26
ZNF540-205ENST00000587220 ZNF594Q96JF6 807 aaPredicted RBP13.44□□□□□ -0.26
ZNF540-205ENST00000587220 A0A1B0GUL6 1792 aa13.44□□□□□ -0.26
ZNF540-205ENST00000587220 PITPNM2Q9BZ72 1349 aa13.43□□□□□ -0.26
ZNF540-205ENST00000587220 CA12O43570 354 aa13.43□□□□□ -0.26
ZNF540-205ENST00000587220 NBPF7P0C2Y1 421 aaPredicted RBP13.43□□□□□ -0.26
ZNF540-205ENST00000587220 MMP14P50281 582 aa13.43□□□□□ -0.26
ZNF540-205ENST00000587220 ZNF157P51786 506 aaPredicted RBP13.43□□□□□ -0.26
ZNF540-205ENST00000587220 BRPF1P55201 1214 aaPredicted RBP13.43□□□□□ -0.26
ZNF540-205ENST00000587220 SLFN5Q08AF3 891 aa13.43□□□□□ -0.26
ZNF540-205ENST00000587220 SSH1Q8WYL5 1049 aa13.43□□□□□ -0.26
ZNF540-205ENST00000587220 CCDC102AQ96A19 550 aa13.43□□□□□ -0.26
ZNF540-205ENST00000587220 CD209Q9NNX6 404 aa13.43□□□□□ -0.26
ZNF540-205ENST00000587220 ZNF646O15015 1829 aaPredicted RBP13.42□□□□□ -0.26
ZNF540-205ENST00000587220 SNAP23O00161 211 aa13.42□□□□□ -0.26
ZNF540-205ENST00000587220 SASH1O94885 1247 aa13.42□□□□□ -0.26
ZNF540-205ENST00000587220 NBPF9Q3BBW0 867 aa13.42□□□□□ -0.26
ZNF540-205ENST00000587220 SUCLG2Q96I99 432 aa13.42□□□□□ -0.26
ZNF540-205ENST00000587220 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
ZNF540-205ENST00000587220 CCER2I3L3R5 266 aa13.41□□□□□ -0.26
ZNF540-205ENST00000587220 WNT10BO00744 389 aa13.41□□□□□ -0.26
ZNF540-205ENST00000587220 NF2P35240 595 aa13.41□□□□□ -0.26
ZNF540-205ENST00000587220 TTLL12Q14166 644 aaPredicted RBP13.41□□□□□ -0.26
ZNF540-205ENST00000587220 C15orf52Q6ZUT6 534 aaKnown RBP13.41□□□□□ -0.26
ZNF540-205ENST00000587220 CDCA7LQ96GN5 454 aa13.41□□□□□ -0.26
ZNF540-205ENST00000587220 BICC1Q9H694 974 aaKnown RBP13.41□□□□□ -0.26
ZNF540-205ENST00000587220 TSKSQ9UJT2 592 aa13.41□□□□□ -0.26
ZNF540-205ENST00000587220 SCAF8Q9UPN6 1271 aaKnown RBP13.41□□□□□ -0.26
ZNF540-205ENST00000587220 FKBP1BP68106 108 aa13.4□□□□□ -0.26
ZNF540-205ENST00000587220 ALDH1L2Q3SY69 923 aa13.4□□□□□ -0.26
ZNF540-205ENST00000587220 APOBEC3FQ8IUX4 373 aaKnown RBP13.4□□□□□ -0.26
ZNF540-205ENST00000587220 PAPPA2Q9BXP8 1791 aa13.4□□□□□ -0.26
ZNF540-205ENST00000587220 UTYO14607 1347 aa13.39□□□□□ -0.27
ZNF540-205ENST00000587220 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
ZNF540-205ENST00000587220 F8W031 263 aaPredicted RBP13.39□□□□□ -0.27
ZNF540-205ENST00000587220 IL1R1P14778 569 aa13.39□□□□□ -0.27
ZNF540-205ENST00000587220 DLGAP5Q15398 846 aa13.39□□□□□ -0.27
ZNF540-205ENST00000587220 KAZALD1Q96I82 304 aa13.39□□□□□ -0.27
ZNF540-205ENST00000587220 JAG2Q9Y219 1238 aa13.39□□□□□ -0.27
ZNF540-205ENST00000587220 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
ZNF540-205ENST00000587220 MYO1BO43795 1136 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms