RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 RAD50Q92878 1312 aa10.34□□□□□ -0.75
NPC1-204ENST00000586718 REC8O95072 547 aa10.34□□□□□ -0.75
NPC1-204ENST00000586718 SRGNP10124 158 aa10.34□□□□□ -0.75
NPC1-204ENST00000586718 ANP32AP39687 249 aaKnown RBP10.34□□□□□ -0.75
NPC1-204ENST00000586718 R3HDM1Q15032 1099 aaKnown RBP10.34□□□□□ -0.75
NPC1-204ENST00000586718 STYK1Q6J9G0 422 aa10.34□□□□□ -0.75
NPC1-204ENST00000586718 TICAM2Q86XR7 235 aa10.34□□□□□ -0.75
NPC1-204ENST00000586718 ZNF512BQ96KM6 892 aaPredicted RBP10.34□□□□□ -0.75
NPC1-204ENST00000586718 PAG1Q9NWQ8 432 aa10.34□□□□□ -0.75
NPC1-204ENST00000586718 LEMD3Q9Y2U8 911 aa10.34□□□□□ -0.75
NPC1-204ENST00000586718 AKAP11Q9UKA4 1901 aa10.34□□□□□ -0.75
NPC1-204ENST00000586718 ZNF804BA4D1E1 1349 aa10.33□□□□□ -0.76
NPC1-204ENST00000586718 GOLIM4O00461 696 aa10.33□□□□□ -0.76
NPC1-204ENST00000586718 ZBTB7AO95365 584 aa10.33□□□□□ -0.76
NPC1-204ENST00000586718 ARID4AP29374 1257 aaPredicted RBP10.33□□□□□ -0.76
NPC1-204ENST00000586718 TTF1Q15361 905 aaPredicted RBP10.33□□□□□ -0.76
NPC1-204ENST00000586718 CCDC102BQ68D86 513 aa10.33□□□□□ -0.76
NPC1-204ENST00000586718 CNKSR1Q969H4 720 aa10.33□□□□□ -0.76
NPC1-204ENST00000586718 ZNF622Q969S3 477 aaKnown RBP eCLIP10.33□□□□□ -0.76
NPC1-204ENST00000586718 GGA1Q9UJY5 639 aa10.33□□□□□ -0.76
NPC1-204ENST00000586718 MED23Q9ULK4 1368 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 SEMA3EO15041 775 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 UFL1O94874 794 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 MCCP23508 829 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 ATP2B4P23634 1241 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 CHMLP26374 656 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 PHKA1P46020 1223 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 ZSCAN25Q6NSZ9 544 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 KBTBD3Q8NAB2 608 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.32□□□□□ -0.76
NPC1-204ENST00000586718 ATP6V0A2Q9Y487 856 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 KIAA1551Q9HCM1 1747 aa10.32□□□□□ -0.76
NPC1-204ENST00000586718 FRAT2O75474 233 aaPredicted RBP10.31□□□□□ -0.76
NPC1-204ENST00000586718 FKBP4Q02790 459 aaKnown RBP eCLIP10.31□□□□□ -0.76
NPC1-204ENST00000586718 ZNF804AQ7Z570 1209 aa10.31□□□□□ -0.76
NPC1-204ENST00000586718 SP8Q8IXZ3 490 aa10.31□□□□□ -0.76
NPC1-204ENST00000586718 ESYT1Q9BSJ8 1104 aa10.31□□□□□ -0.76
NPC1-204ENST00000586718 PDGFDQ9GZP0 370 aaPredicted RBP10.31□□□□□ -0.76
NPC1-204ENST00000586718 PODXL2Q9NZ53 605 aa10.31□□□□□ -0.76
NPC1-204ENST00000586718 PDS5AQ29RF7 1337 aaKnown RBP10.31□□□□□ -0.76
NPC1-204ENST00000586718 CCDC88AQ3V6T2 1871 aa10.3□□□□□ -0.76
NPC1-204ENST00000586718 ZFYP08048 801 aaPredicted RBP10.3□□□□□ -0.76
NPC1-204ENST00000586718 HIBADHP31937 336 aaKnown RBP10.3□□□□□ -0.76
NPC1-204ENST00000586718 MCAMP43121 646 aa10.3□□□□□ -0.76
NPC1-204ENST00000586718 GPSM2P81274 684 aa10.3□□□□□ -0.76
NPC1-204ENST00000586718 PRPF40BQ6NWY9 871 aaKnown RBP10.3□□□□□ -0.76
NPC1-204ENST00000586718 DPP8Q6V1X1 898 aaPredicted RBP10.3□□□□□ -0.76
NPC1-204ENST00000586718 KIAA1211Q6ZU35 1233 aa10.3□□□□□ -0.76
NPC1-204ENST00000586718 SPATA5Q8NB90 893 aa10.3□□□□□ -0.76
NPC1-204ENST00000586718 ANO2Q9NQ90 1003 aa10.3□□□□□ -0.76
NPC1-204ENST00000586718 SNRKQ9NRH2 765 aa10.3□□□□□ -0.76
NPC1-204ENST00000586718 DENND2AQ9ULE3 1009 aa10.3□□□□□ -0.76
NPC1-204ENST00000586718 NSFL1CQ9UNZ2 370 aaKnown RBP10.3□□□□□ -0.76
NPC1-204ENST00000586718 ATF5Q9Y2D1 282 aaPredicted RBP10.3□□□□□ -0.76
NPC1-204ENST00000586718 RBM19Q9Y4C8 960 aaKnown RBP10.3□□□□□ -0.76
NPC1-204ENST00000586718 SLX4Q8IY92 1834 aa10.3□□□□□ -0.76
NPC1-204ENST00000586718 BRCA1P38398 1863 aaKnown RBP10.3□□□□□ -0.76
NPC1-204ENST00000586718 PSDA5PKW4 1024 aaPredicted RBP10.29□□□□□ -0.76
NPC1-204ENST00000586718 C6orf229H3BNL8 230 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 EPB41L2O43491 1005 aaKnown RBP10.29□□□□□ -0.76
NPC1-204ENST00000586718 CHRNA5P30532 468 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 ZAP70P43403 619 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 GYG1P46976 350 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 NMIQ13287 307 aaPredicted RBP10.29□□□□□ -0.76
NPC1-204ENST00000586718 RASGRF1Q13972 1273 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 WASHC4Q2M389 1173 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 CC2D2BQ6DHV5 1058 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 CWC27Q6UX04 472 aaKnown RBP10.29□□□□□ -0.76
NPC1-204ENST00000586718 C15orf52Q6ZUT6 534 aaKnown RBP10.29□□□□□ -0.76
NPC1-204ENST00000586718 MPNDQ8N594 471 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 EDC3Q96F86 508 aaKnown RBP10.29□□□□□ -0.76
NPC1-204ENST00000586718 TBC1D32Q96NH3 1257 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 EYA3Q99504 573 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 C22orf23Q9BZE7 217 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 NDUFB9Q9Y6M9 179 aa10.29□□□□□ -0.76
NPC1-204ENST00000586718 SNAP23O00161 211 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 SGSM2O43147 1006 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 IDH1O75874 414 aaKnown RBP10.28□□□□□ -0.76
NPC1-204ENST00000586718 SEC24BO95487 1268 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 BCAMP50895 628 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 TGFB2P61812 414 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 MAP3K12Q12852 859 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 SCARF1Q14162 830 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 GRIPAP1Q4V328 841 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 SOGA3Q5TF21 947 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 ZGPATQ8N5A5 531 aaKnown RBP10.28□□□□□ -0.76
NPC1-204ENST00000586718 TBC1D16Q8TBP0 767 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 DDRGK1Q96HY6 314 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 HMG20BQ9P0W2 317 aa10.28□□□□□ -0.76
NPC1-204ENST00000586718 COL1A1P02452 1464 aaPredicted RBP10.28□□□□□ -0.76
NPC1-204ENST00000586718 MYO5AQ9Y4I1 1855 aaKnown RBP10.27□□□□□ -0.76
NPC1-204ENST00000586718 ZBTB22O15209 634 aa10.27□□□□□ -0.77
NPC1-204ENST00000586718 RNF113AO15541 343 aaKnown RBP10.27□□□□□ -0.77
NPC1-204ENST00000586718 CCDC93Q567U6 631 aa10.27□□□□□ -0.77
NPC1-204ENST00000586718 PI16Q6UXB8 463 aa10.27□□□□□ -0.77
NPC1-204ENST00000586718 FBXO33Q7Z6M2 555 aa10.27□□□□□ -0.77
NPC1-204ENST00000586718 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
NPC1-204ENST00000586718 TTLL6Q8N841 843 aa10.27□□□□□ -0.77
NPC1-204ENST00000586718 SUPT20HQ8NEM7 779 aa10.27□□□□□ -0.77
NPC1-204ENST00000586718 FAM84BQ96KN1 310 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms