RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CCDC88AQ3V6T2 1871 aa23.68■■□□□ 1.38
DDX39A-204ENST00000586558 SLC5A1P13866 664 aa23.68■■□□□ 1.38
DDX39A-204ENST00000586558 IRX6P78412 446 aaPredicted RBP23.68■■□□□ 1.38
DDX39A-204ENST00000586558 ATP2B3Q16720 1220 aa23.68■■□□□ 1.38
DDX39A-204ENST00000586558 COA1Q9GZY4 146 aa23.68■■□□□ 1.38
DDX39A-204ENST00000586558 ECE2O60344 883 aa23.67■■□□□ 1.38
DDX39A-204ENST00000586558 SASH1O94885 1247 aa23.67■■□□□ 1.38
DDX39A-204ENST00000586558 KLRK1P26718 216 aa23.67■■□□□ 1.38
DDX39A-204ENST00000586558 ZNF804AQ7Z570 1209 aa23.67■■□□□ 1.38
DDX39A-204ENST00000586558 TXNRD3Q86VQ6 643 aa23.67■■□□□ 1.38
DDX39A-204ENST00000586558 GPR108Q9NPR9 543 aa23.67■■□□□ 1.38
DDX39A-204ENST00000586558 EXOC6BQ9Y2D4 811 aa23.67■■□□□ 1.38
DDX39A-204ENST00000586558 RAB11FIP3O75154 756 aa23.66■■□□□ 1.38
DDX39A-204ENST00000586558 EIF6P56537 245 aaKnown RBP23.66■■□□□ 1.38
DDX39A-204ENST00000586558 DOK7Q18PE1 504 aa23.66■■□□□ 1.38
DDX39A-204ENST00000586558 PODNQ7Z5L7 613 aa23.66■■□□□ 1.38
DDX39A-204ENST00000586558 DBNDD1Q9H9R9 158 aa23.66■■□□□ 1.38
DDX39A-204ENST00000586558 HDAC1Q13547 482 aaPredicted RBP23.65■■□□□ 1.38
DDX39A-204ENST00000586558 CAVIN4Q5BKX8 364 aa23.65■■□□□ 1.38
DDX39A-204ENST00000586558 DPY19L2Q6NUT2 758 aa23.65■■□□□ 1.38
DDX39A-204ENST00000586558 YY1P25490 414 aa23.64■■□□□ 1.37
DDX39A-204ENST00000586558 KIF1BPQ96EK5 621 aa23.64■■□□□ 1.37
DDX39A-204ENST00000586558 ZNF609O15014 1411 aa23.64■■□□□ 1.37
DDX39A-204ENST00000586558 YDJCA8MPS7 323 aa23.63■■□□□ 1.37
DDX39A-204ENST00000586558 HIBADHP31937 336 aaKnown RBP23.63■■□□□ 1.37
DDX39A-204ENST00000586558 FAM84BQ96KN1 310 aaPredicted RBP23.63■■□□□ 1.37
DDX39A-204ENST00000586558 DCTPP1Q9H773 170 aa23.63■■□□□ 1.37
DDX39A-204ENST00000586558 ZNF541Q9H0D2 1346 aa23.62■■□□□ 1.37
DDX39A-204ENST00000586558 A0A1B0GUL7 405 aa23.62■■□□□ 1.37
DDX39A-204ENST00000586558 GLTPD2A6NH11 291 aa23.62■■□□□ 1.37
DDX39A-204ENST00000586558 NEFLP07196 543 aa23.62■■□□□ 1.37
DDX39A-204ENST00000586558 TNIP1Q15025 636 aa23.62■■□□□ 1.37
DDX39A-204ENST00000586558 FBXO33Q7Z6M2 555 aa23.62■■□□□ 1.37
DDX39A-204ENST00000586558 VPS37DQ86XT2 251 aa23.62■■□□□ 1.37
DDX39A-204ENST00000586558 GPC2Q8N158 579 aa23.62■■□□□ 1.37
DDX39A-204ENST00000586558 RHPN1Q8TCX5 695 aa23.62■■□□□ 1.37
DDX39A-204ENST00000586558 CD209Q9NNX6 404 aa23.62■■□□□ 1.37
DDX39A-204ENST00000586558 KDM2BQ8NHM5 1336 aa23.61■■□□□ 1.37
DDX39A-204ENST00000586558 IL1R1P14778 569 aa23.61■■□□□ 1.37
DDX39A-204ENST00000586558 GYG1P46976 350 aa23.61■■□□□ 1.37
DDX39A-204ENST00000586558 CXCL9Q07325 125 aa23.61■■□□□ 1.37
DDX39A-204ENST00000586558 TNNI3KQ59H18 835 aa23.61■■□□□ 1.37
DDX39A-204ENST00000586558 CIAPIN1Q6FI81 312 aa23.61■■□□□ 1.37
DDX39A-204ENST00000586558 FPGT-TNNI3KV9GXZ4 949 aa23.61■■□□□ 1.37
DDX39A-204ENST00000586558 ARAP2Q8WZ64 1704 aa23.6■■□□□ 1.37
DDX39A-204ENST00000586558 RWDD1Q9H446 243 aaPredicted RBP23.6■■□□□ 1.37
DDX39A-204ENST00000586558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.6■■□□□ 1.37
DDX39A-204ENST00000586558 RAD17O75943 681 aa23.59■■□□□ 1.37
DDX39A-204ENST00000586558 TIMM10P62072 90 aa23.59■■□□□ 1.37
DDX39A-204ENST00000586558 USP17L3A6NCW0 530 aa23.58■■□□□ 1.37
DDX39A-204ENST00000586558 USP17L4A6NCW7 530 aa23.58■■□□□ 1.37
DDX39A-204ENST00000586558 ZBTB22O15209 634 aa23.58■■□□□ 1.37
DDX39A-204ENST00000586558 USP17L1Q7RTZ2 530 aa23.58■■□□□ 1.37
DDX39A-204ENST00000586558 TDRD7Q8NHU6 1098 aaKnown RBP23.58■■□□□ 1.37
DDX39A-204ENST00000586558 XAGE2Q96GT9 111 aa23.58■■□□□ 1.37
DDX39A-204ENST00000586558 NEUROD6Q96NK8 337 aa23.58■■□□□ 1.37
DDX39A-204ENST00000586558 LRRCC1Q9C099 1032 aa23.58■■□□□ 1.37
DDX39A-204ENST00000586558 GNL3LQ9NVN8 582 aaKnown RBP23.58■■□□□ 1.37
DDX39A-204ENST00000586558 APBB1O00213 710 aa23.57■■□□□ 1.36
DDX39A-204ENST00000586558 BCAMP50895 628 aa23.57■■□□□ 1.36
DDX39A-204ENST00000586558 STRIP1Q5VSL9 837 aa23.57■■□□□ 1.36
DDX39A-204ENST00000586558 CLASRPQ8N2M8 674 aaKnown RBP23.57■■□□□ 1.36
DDX39A-204ENST00000586558 GCC1Q96CN9 775 aa23.57■■□□□ 1.36
DDX39A-204ENST00000586558 L3MBTL3Q96JM7 780 aaPredicted RBP23.57■■□□□ 1.36
DDX39A-204ENST00000586558 PSMD14O00487 310 aa23.56■■□□□ 1.36
DDX39A-204ENST00000586558 DDNO94850 711 aaPredicted RBP23.56■■□□□ 1.36
DDX39A-204ENST00000586558 VIL1P09327 827 aaKnown RBP23.56■■□□□ 1.36
DDX39A-204ENST00000586558 ADORA1P30542 326 aa23.56■■□□□ 1.36
DDX39A-204ENST00000586558 GORABQ5T7V8 394 aa23.56■■□□□ 1.36
DDX39A-204ENST00000586558 KCNQ5Q9NR82 932 aa23.56■■□□□ 1.36
DDX39A-204ENST00000586558 GJA3Q9Y6H8 435 aa23.56■■□□□ 1.36
DDX39A-204ENST00000586558 SEMA3EO15041 775 aa23.55■■□□□ 1.36
DDX39A-204ENST00000586558 RPS12P25398 132 aaKnown RBP23.55■■□□□ 1.36
DDX39A-204ENST00000586558 CCDC102BQ68D86 513 aa23.55■■□□□ 1.36
DDX39A-204ENST00000586558 EAF2Q96CJ1 260 aaPredicted RBP23.55■■□□□ 1.36
DDX39A-204ENST00000586558 IL1RAPL2Q9NP60 686 aa23.55■■□□□ 1.36
DDX39A-204ENST00000586558 FAM205AQ6ZU69 1335 aa23.55■■□□□ 1.36
DDX39A-204ENST00000586558 FRAT2O75474 233 aaPredicted RBP23.54■■□□□ 1.36
DDX39A-204ENST00000586558 TTLL5Q6EMB2 1281 aa23.54■■□□□ 1.36
DDX39A-204ENST00000586558 AACSQ86V21 672 aa23.54■■□□□ 1.36
DDX39A-204ENST00000586558 SCN9AQ15858 1988 aa23.54■■□□□ 1.36
DDX39A-204ENST00000586558 MYO3BQ8WXR4 1341 aa23.54■■□□□ 1.36
DDX39A-204ENST00000586558 PHKA1P46020 1223 aa23.53■■□□□ 1.36
DDX39A-204ENST00000586558 GTF2IP78347 998 aa23.53■■□□□ 1.36
DDX39A-204ENST00000586558 DACT2Q5SW24 774 aa23.53■■□□□ 1.36
DDX39A-204ENST00000586558 RSBN1LQ6PCB5 846 aaPredicted RBP23.53■■□□□ 1.36
DDX39A-204ENST00000586558 PSME4Q14997 1843 aa23.53■■□□□ 1.36
DDX39A-204ENST00000586558 WDR90Q96KV7 1748 aa23.53■■□□□ 1.36
DDX39A-204ENST00000586558 FKBP1AP62942 108 aaKnown RBP23.52■■□□□ 1.36
DDX39A-204ENST00000586558 AGBL3Q8NEM8 1001 aa23.52■■□□□ 1.36
DDX39A-204ENST00000586558 DPF2Q92785 391 aa23.52■■□□□ 1.36
DDX39A-204ENST00000586558 DBNDD2Q9BQY9 259 aa23.52■■□□□ 1.36
DDX39A-204ENST00000586558 DBNLQ9UJU6 430 aaKnown RBP23.52■■□□□ 1.36
DDX39A-204ENST00000586558 IQCA1LA6NCM1 817 aa23.51■■□□□ 1.35
DDX39A-204ENST00000586558 IFIT2P09913 472 aaKnown RBP23.51■■□□□ 1.35
DDX39A-204ENST00000586558 UQCRFS1P1P0C7P4 283 aa23.51■■□□□ 1.35
DDX39A-204ENST00000586558 GMPSP49915 693 aaPredicted RBP23.51■■□□□ 1.35
DDX39A-204ENST00000586558 CCDC158Q5M9N0 1113 aa23.51■■□□□ 1.35
DDX39A-204ENST00000586558 SMC5Q8IY18 1101 aa23.51■■□□□ 1.35
DDX39A-204ENST00000586558 ZNF526Q8TF50 670 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms