RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 SPC24Q8NBT2 197 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 TNMDQ9H2S6 317 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 CCDC69A6NI79 296 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 IFIT3O14879 490 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 CYP7A1P22680 504 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 RFC4P35249 363 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 SCARF1Q14162 830 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 GPT2Q8TD30 523 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 CPDO75976 1380 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 NWD1Q149M9 1564 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 BECN2A8MW95 431 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 KIAA2012Q0VF49 1180 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 CUL4AQ13619 759 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 SUSD4Q5VX71 490 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 ZKSCAN3Q9BRR0 538 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 ORC3Q9UBD5 711 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 CHD2O14647 1828 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 RAD21O60216 631 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 DHX16O60231 1041 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 ZFYP08048 801 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 RABL6Q3YEC7 729 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 NCOA7Q8NI08 942 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 OSBP2Q969R2 916 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 ISCA1Q9BUE6 129 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 HELLSQ9NRZ9 838 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 LTN1O94822 1766 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 PXDNLA1KZ92 1463 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 MBD4O95243 580 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 UQCRFS1P1P0C7P4 283 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 BCAMP50895 628 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 ARMT1Q9H993 441 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 USP21Q9UK80 565 aa14.63□□□□□ -0.07
SMARCA4-208ENST00000585799 SART3Q15020 963 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 CCDC102BQ68D86 513 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 C8orf76Q96K31 380 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 AK7Q96M32 723 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 NUP62CLQ9H1M0 184 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 CCNL1Q9UK58 526 aaPredicted RBP14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 OVOS2A0A0G2JMS6 1433 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 PTPDC1A2A3K4 754 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 MCM5P33992 734 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 TTF1Q15361 905 aaPredicted RBP14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 CDCA7Q9BWT1 371 aaPredicted RBP14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 TM6SF1Q9BZW5 370 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 RBSNQ9H1K0 784 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 SLC4A4Q9Y6R1 1079 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 ZNF532Q9HCE3 1301 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 E7EWF7 191 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 M0R2C6 588 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 RANBP6O60518 1105 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 IL6STP40189 918 aaPredicted RBP14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 APPBP2Q92624 585 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 NLRP3Q96P20 1036 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 USP25Q9UHP3 1055 aa14.62□□□□□ -0.07
SMARCA4-208ENST00000585799 MAST3O60307 1309 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 B4E1Z4 1266 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 GOLGA6L19H0YKK7 550 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 CCDC173Q0VFZ6 552 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 TMEM67Q5HYA8 995 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 TFCP2L1Q9NZI6 479 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 ESPNB1AK53 854 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 PUM3Q15397 648 aaKnown RBP14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 CCDC183Q5T5S1 534 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 ARID3AQ99856 593 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 NOL10Q9BSC4 688 aaKnown RBP14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 UBAC1Q9BSL1 405 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 KINO60870 393 aaKnown RBP14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 UBE2HP62256 183 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 MYL10Q9BUA6 226 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 DCCP43146 1447 aa14.61□□□□□ -0.07
SMARCA4-208ENST00000585799 UTYO14607 1347 aa14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 PDE8BO95263 885 aa14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 FGAP02671 866 aa14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 GYG1P46976 350 aa14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 MARCH10Q8NA82 808 aaPredicted RBP14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 PUS7LQ9H0K6 701 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 TMX4Q9H1E5 349 aaPredicted RBP14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 SRP68Q9UHB9 627 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 RTCBQ9Y3I0 505 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 A0A0G2JLW4 131 aa14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 MTMR6Q9Y217 621 aa14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 ZNF396Q96N95 335 aaPredicted RBP14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 ZNF219Q9P2Y4 722 aaPredicted RBP14.6□□□□□ -0.07
SMARCA4-208ENST00000585799 CAMTA1Q9Y6Y1 1673 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 SAFBQ15424 915 aaKnown RBP eCLIP14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 ZMYM1Q5SVZ6 1142 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 LRSAM1Q6UWE0 723 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 VSIG10Q8N0Z9 540 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 LPIN2Q92539 896 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 GOLGA8AA7E2F4 631 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 NKX1-1Q15270 411 aaPredicted RBP14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 USPL1Q5W0Q7 1092 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 SCAND2PQ9GZW5 306 aaPredicted RBP14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 CTDSPL2Q05D32 466 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 CREBRFQ8IUR6 639 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 TTC14Q96N46 770 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 DACT1Q9NYF0 836 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 CFAP45Q9UL16 551 aa14.59□□□□□ -0.07
SMARCA4-208ENST00000585799 COL5A2P05997 1499 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms