RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 KCNQ5Q9NR82 932 aa11.99□□□□□ -0.49
SDF2-203ENST00000585749 LAS1LQ9Y4W2 734 aaKnown RBP11.99□□□□□ -0.49
SDF2-203ENST00000585749 SCN9AQ15858 1988 aa11.99□□□□□ -0.49
SDF2-203ENST00000585749 RBBP6Q7Z6E9 1792 aaKnown RBP11.98□□□□□ -0.49
SDF2-203ENST00000585749 GPR25O00155 361 aa11.98□□□□□ -0.49
SDF2-203ENST00000585749 HCLS1P14317 486 aaPredicted RBP11.98□□□□□ -0.49
SDF2-203ENST00000585749 GNAI1P63096 354 aa11.98□□□□□ -0.49
SDF2-203ENST00000585749 FKBP1BP68106 108 aa11.98□□□□□ -0.49
SDF2-203ENST00000585749 PDIA6Q15084 440 aa11.98□□□□□ -0.49
SDF2-203ENST00000585749 TMC4Q7Z404 712 aa11.98□□□□□ -0.49
SDF2-203ENST00000585749 MBIPQ9NS73 344 aa11.98□□□□□ -0.49
SDF2-203ENST00000585749 COL4A1P02462 1669 aa11.97□□□□□ -0.49
SDF2-203ENST00000585749 ECE2O60344 883 aa11.97□□□□□ -0.49
SDF2-203ENST00000585749 EIF2S2P20042 333 aaKnown RBP11.97□□□□□ -0.49
SDF2-203ENST00000585749 PSEN1P49768 467 aa11.97□□□□□ -0.49
SDF2-203ENST00000585749 KRT24Q2M2I5 525 aa11.97□□□□□ -0.49
SDF2-203ENST00000585749 SLC39A7Q92504 469 aa11.97□□□□□ -0.49
SDF2-203ENST00000585749 RNF25Q96BH1 459 aaPredicted RBP11.97□□□□□ -0.49
SDF2-203ENST00000585749 METRNQ9UJH8 293 aa11.97□□□□□ -0.49
SDF2-203ENST00000585749 RIMBP2O15034 1052 aa11.96□□□□□ -0.49
SDF2-203ENST00000585749 C7P10643 843 aa11.96□□□□□ -0.49
SDF2-203ENST00000585749 TM4SF4P48230 202 aa11.96□□□□□ -0.49
SDF2-203ENST00000585749 ANGEL2Q5VTE6 544 aaKnown RBP11.96□□□□□ -0.49
SDF2-203ENST00000585749 MOB2Q70IA6 237 aa11.96□□□□□ -0.49
SDF2-203ENST00000585749 POLLQ9UGP5 575 aa11.96□□□□□ -0.49
SDF2-203ENST00000585749 ZNF609O15014 1411 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 IL16Q14005 1332 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 POTEFA5A3E0 1075 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
SDF2-203ENST00000585749 VIL1P09327 827 aaKnown RBP11.95□□□□□ -0.5
SDF2-203ENST00000585749 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 PROSER3Q2NL68 480 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 HDGFL1Q5TGJ6 251 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 LHX8Q68G74 356 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 NLRP10Q86W26 655 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 WWC1Q8IX03 1113 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 CFHR5Q9BXR6 569 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
SDF2-203ENST00000585749 PSME4Q14997 1843 aa11.95□□□□□ -0.5
SDF2-203ENST00000585749 UBE2Q2LH0YL09 131 aa11.94□□□□□ -0.5
SDF2-203ENST00000585749 C6orf229H3BNL8 230 aa11.94□□□□□ -0.5
SDF2-203ENST00000585749 FKTNO75072 461 aa11.94□□□□□ -0.5
SDF2-203ENST00000585749 ZNF280AP59817 542 aaPredicted RBP11.94□□□□□ -0.5
SDF2-203ENST00000585749 GPSM2P81274 684 aa11.94□□□□□ -0.5
SDF2-203ENST00000585749 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
SDF2-203ENST00000585749 SCARF1Q14162 830 aa11.94□□□□□ -0.5
SDF2-203ENST00000585749 DUSP27Q5VZP5 1158 aa11.94□□□□□ -0.5
SDF2-203ENST00000585749 CELF1Q92879 486 aaKnown RBP11.94□□□□□ -0.5
SDF2-203ENST00000585749 R3HDMLQ9H3Y0 253 aa11.94□□□□□ -0.5
SDF2-203ENST00000585749 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
SDF2-203ENST00000585749 DBF4Q9UBU7 674 aaPredicted RBP11.94□□□□□ -0.5
SDF2-203ENST00000585749 SH3TC1Q8TE82 1336 aa11.93□□□□□ -0.5
SDF2-203ENST00000585749 PITPNM2Q9BZ72 1349 aa11.93□□□□□ -0.5
SDF2-203ENST00000585749 ANXA1P04083 346 aa11.93□□□□□ -0.5
SDF2-203ENST00000585749 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
SDF2-203ENST00000585749 TRMT112Q9UI30 125 aaKnown RBP11.93□□□□□ -0.5
SDF2-203ENST00000585749 KIAA0100Q14667 2235 aaKnown RBP11.92□□□□□ -0.5
SDF2-203ENST00000585749 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
SDF2-203ENST00000585749 INTS3Q68E01 1043 aaKnown RBP11.92□□□□□ -0.5
SDF2-203ENST00000585749 COPS6Q7L5N1 327 aa11.92□□□□□ -0.5
SDF2-203ENST00000585749 TBC1D16Q8TBP0 767 aa11.92□□□□□ -0.5
SDF2-203ENST00000585749 XAGE3Q8WTP9 111 aa11.92□□□□□ -0.5
SDF2-203ENST00000585749 EYA3Q99504 573 aa11.92□□□□□ -0.5
SDF2-203ENST00000585749 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
SDF2-203ENST00000585749 SCAF8Q9UPN6 1271 aaKnown RBP11.92□□□□□ -0.5
SDF2-203ENST00000585749 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
SDF2-203ENST00000585749 RIOK3O14730 519 aaKnown RBP11.91□□□□□ -0.5
SDF2-203ENST00000585749 SREBF2Q12772 1141 aa11.91□□□□□ -0.5
SDF2-203ENST00000585749 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
SDF2-203ENST00000585749 FAM9BQ8IZU0 186 aa11.91□□□□□ -0.5
SDF2-203ENST00000585749 AGBL3Q8NEM8 1001 aa11.91□□□□□ -0.5
SDF2-203ENST00000585749 HYPKQ9NX55 129 aa11.91□□□□□ -0.5
SDF2-203ENST00000585749 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
SDF2-203ENST00000585749 AIMP1Q12904 312 aaKnown RBP11.9□□□□□ -0.5
SDF2-203ENST00000585749 TCIRG1Q13488 830 aa11.9□□□□□ -0.5
SDF2-203ENST00000585749 SF3B3Q15393 1217 aaKnown RBP11.9□□□□□ -0.5
SDF2-203ENST00000585749 PRAMEF18Q5VWM3 479 aa11.9□□□□□ -0.5
SDF2-203ENST00000585749 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
SDF2-203ENST00000585749 OTOP1Q7RTM1 612 aa11.9□□□□□ -0.5
SDF2-203ENST00000585749 WDR63Q8IWG1 891 aa11.9□□□□□ -0.5
SDF2-203ENST00000585749 C8orf58Q8NAV2 365 aa11.9□□□□□ -0.5
SDF2-203ENST00000585749 TSR2Q969E8 191 aaKnown RBP11.9□□□□□ -0.5
SDF2-203ENST00000585749 GMLQ99445 158 aa11.9□□□□□ -0.5
SDF2-203ENST00000585749 MYOZ2Q9NPC6 264 aa11.9□□□□□ -0.5
SDF2-203ENST00000585749 TRIM17Q9Y577 477 aa11.9□□□□□ -0.5
SDF2-203ENST00000585749 LAMB1P07942 1786 aa11.9□□□□□ -0.51
SDF2-203ENST00000585749 TRIOBPQ9H2D6 2365 aa11.89□□□□□ -0.51
SDF2-203ENST00000585749 EN2P19622 333 aaPredicted RBP11.89□□□□□ -0.51
SDF2-203ENST00000585749 PLBD2Q8NHP8 589 aa11.89□□□□□ -0.51
SDF2-203ENST00000585749 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
SDF2-203ENST00000585749 ZC3H12CQ9C0D7 883 aaKnown RBP11.89□□□□□ -0.51
SDF2-203ENST00000585749 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
SDF2-203ENST00000585749 ELL2O00472 640 aaPredicted RBP11.88□□□□□ -0.51
SDF2-203ENST00000585749 USP17L8P0C7I0 530 aa11.88□□□□□ -0.51
SDF2-203ENST00000585749 TTLL12Q14166 644 aaPredicted RBP11.88□□□□□ -0.51
SDF2-203ENST00000585749 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
SDF2-203ENST00000585749 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
SDF2-203ENST00000585749 TSPYL6Q8N831 410 aa11.88□□□□□ -0.51
SDF2-203ENST00000585749 PODXL2Q9NZ53 605 aa11.88□□□□□ -0.51
SDF2-203ENST00000585749 CEP290O15078 2479 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms