RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 DBNDD1Q9H9R9 158 aa28.96■■■□□ 2.23
LSM7-202ENST00000585395 BSDC1Q9NW68 430 aaPredicted RBP28.96■■■□□ 2.23
LSM7-202ENST00000585395 PODXL2Q9NZ53 605 aa28.96■■■□□ 2.23
LSM7-202ENST00000585395 AOC2O75106 756 aa28.95■■■□□ 2.22
LSM7-202ENST00000585395 IFIT5Q13325 482 aaKnown RBP28.95■■■□□ 2.22
LSM7-202ENST00000585395 TAF7LQ5H9L4 462 aa28.95■■■□□ 2.22
LSM7-202ENST00000585395 HHIPL1Q96JK4 782 aa28.95■■■□□ 2.22
LSM7-202ENST00000585395 CSF1RP07333 972 aa28.94■■■□□ 2.22
LSM7-202ENST00000585395 ATP2B4P23634 1241 aa28.94■■■□□ 2.22
LSM7-202ENST00000585395 CXCL9Q07325 125 aa28.94■■■□□ 2.22
LSM7-202ENST00000585395 SAPCD2Q86UD0 394 aa28.94■■■□□ 2.22
LSM7-202ENST00000585395 ADARB2Q9NS39 739 aaKnown RBP28.94■■■□□ 2.22
LSM7-202ENST00000585395 TNRC18O15417 2968 aaPredicted RBP28.93■■■□□ 2.22
LSM7-202ENST00000585395 GNAI3P08754 354 aa28.93■■■□□ 2.22
LSM7-202ENST00000585395 UBTFL1P0CB47 393 aaPredicted RBP28.93■■■□□ 2.22
LSM7-202ENST00000585395 DOK7Q18PE1 504 aa28.93■■■□□ 2.22
LSM7-202ENST00000585395 USP44Q9H0E7 712 aa28.93■■■□□ 2.22
LSM7-202ENST00000585395 ECE2O60344 883 aa28.92■■■□□ 2.22
LSM7-202ENST00000585395 CCDC57Q2TAC2 916 aa28.92■■■□□ 2.22
LSM7-202ENST00000585395 LMBR1LQ6UX01 489 aa28.92■■■□□ 2.22
LSM7-202ENST00000585395 MINPP1Q9UNW1 487 aa28.92■■■□□ 2.22
LSM7-202ENST00000585395 NBPF7P0C2Y1 421 aaPredicted RBP28.91■■■□□ 2.22
LSM7-202ENST00000585395 FOXO4P98177 505 aa28.91■■■□□ 2.22
LSM7-202ENST00000585395 GPRC5DQ9NZD1 345 aa28.91■■■□□ 2.22
LSM7-202ENST00000585395 CELF2O95319 508 aaKnown RBP28.9■■■□□ 2.22
LSM7-202ENST00000585395 KCNJ4P48050 445 aa28.9■■■□□ 2.22
LSM7-202ENST00000585395 TMEM57Q8N5G2 664 aa28.89■■■□□ 2.22
LSM7-202ENST00000585395 ANKRD2Q9GZV1 360 aa28.89■■■□□ 2.22
LSM7-202ENST00000585395 CHMP4BQ9H444 224 aaKnown RBP28.89■■■□□ 2.22
LSM7-202ENST00000585395 CASP8AP2Q9UKL3 1982 aa28.88■■■□□ 2.21
LSM7-202ENST00000585395 YDJCA8MPS7 323 aa28.88■■■□□ 2.21
LSM7-202ENST00000585395 GMPSP49915 693 aaPredicted RBP28.88■■■□□ 2.21
LSM7-202ENST00000585395 ITPRIPQ8IWB1 547 aa28.88■■■□□ 2.21
LSM7-202ENST00000585395 SUCLG2Q96I99 432 aa28.88■■■□□ 2.21
LSM7-202ENST00000585395 EPHA10Q5JZY3 1008 aa28.87■■■□□ 2.21
LSM7-202ENST00000585395 DGKZQ13574 1117 aa28.86■■■□□ 2.21
LSM7-202ENST00000585395 PDE3AQ14432 1141 aa28.86■■■□□ 2.21
LSM7-202ENST00000585395 PGAP2Q9UHJ9 254 aa28.86■■■□□ 2.21
LSM7-202ENST00000585395 TNNQ9UQP3 1299 aa28.86■■■□□ 2.21
LSM7-202ENST00000585395 PSMD14O00487 310 aa28.85■■■□□ 2.21
LSM7-202ENST00000585395 CNNM1Q9NRU3 951 aa28.85■■■□□ 2.21
LSM7-202ENST00000585395 LEMD3Q9Y2U8 911 aa28.85■■■□□ 2.21
LSM7-202ENST00000585395 PDE4DIPQ5VU43 2346 aa28.85■■■□□ 2.21
LSM7-202ENST00000585395 ZC3H15Q8WU90 426 aaKnown RBP28.84■■■□□ 2.21
LSM7-202ENST00000585395 CHRNDQ07001 517 aa28.83■■■□□ 2.21
LSM7-202ENST00000585395 MEIS3Q99687 375 aa28.83■■■□□ 2.21
LSM7-202ENST00000585395 GLIS2Q9BZE0 524 aaPredicted RBP28.83■■■□□ 2.21
LSM7-202ENST00000585395 BICC1Q9H694 974 aaKnown RBP28.83■■■□□ 2.21
LSM7-202ENST00000585395 MED23Q9ULK4 1368 aa28.83■■■□□ 2.21
LSM7-202ENST00000585395 H7C1D1 291 aa28.82■■■□□ 2.2
LSM7-202ENST00000585395 RABL6Q3YEC7 729 aaPredicted RBP28.82■■■□□ 2.2
LSM7-202ENST00000585395 LDHAL6AQ6ZMR3 332 aa28.82■■■□□ 2.2
LSM7-202ENST00000585395 ZNF594Q96JF6 807 aaPredicted RBP28.82■■■□□ 2.2
LSM7-202ENST00000585395 ZNF804BA4D1E1 1349 aa28.82■■■□□ 2.2
LSM7-202ENST00000585395 PLIN1O60240 522 aa28.81■■■□□ 2.2
LSM7-202ENST00000585395 GNAI2P04899 355 aa28.81■■■□□ 2.2
LSM7-202ENST00000585395 NOGQ13253 232 aa28.81■■■□□ 2.2
LSM7-202ENST00000585395 PANK1Q8TE04 598 aa28.81■■■□□ 2.2
LSM7-202ENST00000585395 FBXW7Q969H0 707 aa28.81■■■□□ 2.2
LSM7-202ENST00000585395 DDX19BQ9UMR2 479 aa28.81■■■□□ 2.2
LSM7-202ENST00000585395 ZBTB12Q9Y330 459 aaPredicted RBP28.81■■■□□ 2.2
LSM7-202ENST00000585395 RLBP1P12271 317 aa28.8■■■□□ 2.2
LSM7-202ENST00000585395 CNOT7Q9UIV1 285 aaKnown RBP28.8■■■□□ 2.2
LSM7-202ENST00000585395 RPS12P25398 132 aaKnown RBP28.79■■■□□ 2.2
LSM7-202ENST00000585395 CDC37L1Q7L3B6 337 aa28.79■■■□□ 2.2
LSM7-202ENST00000585395 MICALL2Q8IY33 904 aa28.79■■■□□ 2.2
LSM7-202ENST00000585395 HELBQ8NG08 1087 aaPredicted RBP28.79■■■□□ 2.2
LSM7-202ENST00000585395 KAZALD1Q96I82 304 aa28.79■■■□□ 2.2
LSM7-202ENST00000585395 KCNQ5Q9NR82 932 aa28.79■■■□□ 2.2
LSM7-202ENST00000585395 LRRFIP2Q9Y608 721 aaKnown RBP28.79■■■□□ 2.2
LSM7-202ENST00000585395 RRP1P56182 461 aaKnown RBP28.78■■■□□ 2.2
LSM7-202ENST00000585395 MVPQ14764 893 aaKnown RBP28.78■■■□□ 2.2
LSM7-202ENST00000585395 PODNQ7Z5L7 613 aa28.78■■■□□ 2.2
LSM7-202ENST00000585395 ZNF408Q9H9D4 720 aa28.78■■■□□ 2.2
LSM7-202ENST00000585395 SCN9AQ15858 1988 aa28.78■■■□□ 2.2
LSM7-202ENST00000585395 TAF5LO75529 589 aa28.77■■■□□ 2.2
LSM7-202ENST00000585395 DPF2Q92785 391 aa28.77■■■□□ 2.2
LSM7-202ENST00000585395 WTIPA6NIX2 430 aaPredicted RBP28.76■■■□□ 2.19
LSM7-202ENST00000585395 ANKRD44Q8N8A2 993 aa28.76■■■□□ 2.19
LSM7-202ENST00000585395 COA1Q9GZY4 146 aa28.76■■■□□ 2.19
LSM7-202ENST00000585395 USP17L3A6NCW0 530 aa28.75■■■□□ 2.19
LSM7-202ENST00000585395 USP17L4A6NCW7 530 aa28.75■■■□□ 2.19
LSM7-202ENST00000585395 USP17L1Q7RTZ2 530 aa28.75■■■□□ 2.19
LSM7-202ENST00000585395 A0A1B0GUL6 1792 aa28.75■■■□□ 2.19
LSM7-202ENST00000585395 PSME4Q14997 1843 aa28.74■■■□□ 2.19
LSM7-202ENST00000585395 ZBTB7BO15156 539 aaPredicted RBP28.74■■■□□ 2.19
LSM7-202ENST00000585395 VIL1P09327 827 aaKnown RBP28.74■■■□□ 2.19
LSM7-202ENST00000585395 HIRAP54198 1017 aaPredicted RBP28.74■■■□□ 2.19
LSM7-202ENST00000585395 COG6Q9Y2V7 657 aa28.74■■■□□ 2.19
LSM7-202ENST00000585395 SHTN1A0MZ66 631 aa28.72■■■□□ 2.19
LSM7-202ENST00000585395 HUNKP57058 714 aa28.72■■■□□ 2.19
LSM7-202ENST00000585395 RBM26Q5T8P6 1007 aaKnown RBP28.72■■■□□ 2.19
LSM7-202ENST00000585395 RSBN1LQ6PCB5 846 aaPredicted RBP28.72■■■□□ 2.19
LSM7-202ENST00000585395 TRPM4Q8TD43 1214 aa28.72■■■□□ 2.19
LSM7-202ENST00000585395 SAGE1Q9NXZ1 904 aa28.72■■■□□ 2.19
LSM7-202ENST00000585395 KLRK1P26718 216 aa28.71■■■□□ 2.19
LSM7-202ENST00000585395 TBC1D10BQ4KMP7 808 aaPredicted RBP28.71■■■□□ 2.19
LSM7-202ENST00000585395 ZNF804AQ7Z570 1209 aa28.71■■■□□ 2.19
LSM7-202ENST00000585395 SAMD7Q7Z3H4 446 aa28.7■■■□□ 2.18
LSM7-202ENST00000585395 TXNRD3Q86VQ6 643 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms