RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 CTSWP56202 376 aa16.77■□□□□ 0.28
CDK5RAP3-234ENST00000584525 TTLL12Q14166 644 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-234ENST00000584525 PRAMEF18Q5VWM3 479 aa16.77■□□□□ 0.28
CDK5RAP3-234ENST00000584525 WDR63Q8IWG1 891 aa16.77■□□□□ 0.28
CDK5RAP3-234ENST00000584525 MAP3K2Q9Y2U5 619 aa16.77■□□□□ 0.28
CDK5RAP3-234ENST00000584525 CASP8AP2Q9UKL3 1982 aa16.77■□□□□ 0.27
CDK5RAP3-234ENST00000584525 NBPF9Q3BBW0 867 aa16.76■□□□□ 0.27
CDK5RAP3-234ENST00000584525 MIER1Q8N108 512 aa16.76■□□□□ 0.27
CDK5RAP3-234ENST00000584525 OGFOD1Q8N543 542 aa16.76■□□□□ 0.27
CDK5RAP3-234ENST00000584525 MXD3Q9BW11 206 aa16.76■□□□□ 0.27
CDK5RAP3-234ENST00000584525 MYH16Q9H6N6 1097 aa16.76■□□□□ 0.27
CDK5RAP3-234ENST00000584525 MINPP1Q9UNW1 487 aa16.76■□□□□ 0.27
CDK5RAP3-234ENST00000584525 ZNF609O15014 1411 aa16.76■□□□□ 0.27
CDK5RAP3-234ENST00000584525 TSR2Q969E8 191 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-234ENST00000584525 GREM2Q9H772 168 aa16.75■□□□□ 0.27
CDK5RAP3-234ENST00000584525 BSDC1Q9NW68 430 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-234ENST00000584525 HDAC9Q9UKV0 1011 aa16.75■□□□□ 0.27
CDK5RAP3-234ENST00000584525 PI4KAP2A4QPH2 592 aa16.74■□□□□ 0.27
CDK5RAP3-234ENST00000584525 TBC1D8O95759 1140 aa16.74■□□□□ 0.27
CDK5RAP3-234ENST00000584525 IGKV5-2P06315 115 aa16.74■□□□□ 0.27
CDK5RAP3-234ENST00000584525 NEXNQ0ZGT2 675 aa16.74■□□□□ 0.27
CDK5RAP3-234ENST00000584525 KSR2Q6VAB6 950 aa16.74■□□□□ 0.27
CDK5RAP3-234ENST00000584525 PI4KAP1Q8N8J0 262 aa16.74■□□□□ 0.27
CDK5RAP3-234ENST00000584525 TTLL11Q8NHH1 800 aa16.74■□□□□ 0.27
CDK5RAP3-234ENST00000584525 NF2P35240 595 aa16.73■□□□□ 0.27
CDK5RAP3-234ENST00000584525 CCT4P50991 539 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-234ENST00000584525 MKRN3Q13064 507 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-234ENST00000584525 DACT2Q5SW24 774 aa16.73■□□□□ 0.27
CDK5RAP3-234ENST00000584525 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
CDK5RAP3-234ENST00000584525 STK31Q9BXU1 1019 aa16.73■□□□□ 0.27
CDK5RAP3-234ENST00000584525 COA1Q9GZY4 146 aa16.73■□□□□ 0.27
CDK5RAP3-234ENST00000584525 MED23Q9ULK4 1368 aa16.73■□□□□ 0.27
CDK5RAP3-234ENST00000584525 WNT10BO00744 389 aa16.72■□□□□ 0.27
CDK5RAP3-234ENST00000584525 IGHMBP2P38935 993 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-234ENST00000584525 STRIP1Q5VSL9 837 aa16.72■□□□□ 0.27
CDK5RAP3-234ENST00000584525 ZNF296Q8WUU4 475 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-234ENST00000584525 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
CDK5RAP3-234ENST00000584525 MYO3BQ8WXR4 1341 aa16.71■□□□□ 0.27
CDK5RAP3-234ENST00000584525 SASH1O94885 1247 aa16.71■□□□□ 0.27
CDK5RAP3-234ENST00000584525 PKN2Q16513 984 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-234ENST00000584525 CWF19L2Q2TBE0 894 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-234ENST00000584525 LEMD3Q9Y2U8 911 aa16.71■□□□□ 0.27
CDK5RAP3-234ENST00000584525 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
CDK5RAP3-234ENST00000584525 TM4SF4P48230 202 aa16.7■□□□□ 0.26
CDK5RAP3-234ENST00000584525 PRKG1Q13976 671 aa16.7■□□□□ 0.26
CDK5RAP3-234ENST00000584525 TWISTNBQ3B726 338 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-234ENST00000584525 TTLL5Q6EMB2 1281 aa16.7■□□□□ 0.26
CDK5RAP3-234ENST00000584525 UBE3BQ7Z3V4 1068 aa16.7■□□□□ 0.26
CDK5RAP3-234ENST00000584525 TXNRD3Q86VQ6 643 aa16.7■□□□□ 0.26
CDK5RAP3-234ENST00000584525 SCN9AQ15858 1988 aa16.69■□□□□ 0.26
CDK5RAP3-234ENST00000584525 NEURL1BA8MQ27 555 aa16.69■□□□□ 0.26
CDK5RAP3-234ENST00000584525 ARMC9Q7Z3E5 817 aa16.69■□□□□ 0.26
CDK5RAP3-234ENST00000584525 KIAA0825Q8IV33 1275 aa16.69■□□□□ 0.26
CDK5RAP3-234ENST00000584525 MPHOSPH8Q99549 860 aa16.69■□□□□ 0.26
CDK5RAP3-234ENST00000584525 ANKRD2Q9GZV1 360 aa16.69■□□□□ 0.26
CDK5RAP3-234ENST00000584525 ZNF804BA4D1E1 1349 aa16.69■□□□□ 0.26
CDK5RAP3-234ENST00000584525 H7C1W4 665 aa16.68■□□□□ 0.26
CDK5RAP3-234ENST00000584525 GPR25O00155 361 aa16.68■□□□□ 0.26
CDK5RAP3-234ENST00000584525 KCNJ4P48050 445 aa16.68■□□□□ 0.26
CDK5RAP3-234ENST00000584525 MMP14P50281 582 aa16.68■□□□□ 0.26
CDK5RAP3-234ENST00000584525 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-234ENST00000584525 SREBF2Q12772 1141 aa16.68■□□□□ 0.26
CDK5RAP3-234ENST00000584525 PAPPA2Q9BXP8 1791 aa16.67■□□□□ 0.26
CDK5RAP3-234ENST00000584525 SLC4A2P04920 1241 aa16.67■□□□□ 0.26
CDK5RAP3-234ENST00000584525 ITGA6P23229 1130 aa16.67■□□□□ 0.26
CDK5RAP3-234ENST00000584525 KLRK1P26718 216 aa16.67■□□□□ 0.26
CDK5RAP3-234ENST00000584525 GTF2IP78347 998 aa16.67■□□□□ 0.26
CDK5RAP3-234ENST00000584525 G2E3Q7L622 706 aa16.67■□□□□ 0.26
CDK5RAP3-234ENST00000584525 APOBEC3FQ8IUX4 373 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-234ENST00000584525 PCDH10Q9P2E7 1040 aa16.67■□□□□ 0.26
CDK5RAP3-234ENST00000584525 E9PSI1 815 aa16.66■□□□□ 0.26
CDK5RAP3-234ENST00000584525 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-234ENST00000584525 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-234ENST00000584525 ANGEL1Q9UNK9 670 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-234ENST00000584525 TNRC18O15417 2968 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-234ENST00000584525 FKTNO75072 461 aa16.65■□□□□ 0.26
CDK5RAP3-234ENST00000584525 GCKRQ14397 625 aa16.65■□□□□ 0.26
CDK5RAP3-234ENST00000584525 PRPF38BQ5VTL8 546 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-234ENST00000584525 POLR2AP24928 1970 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-234ENST00000584525 HNRNPUQ00839 825 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDK5RAP3-234ENST00000584525 CHRNDQ07001 517 aa16.64■□□□□ 0.25
CDK5RAP3-234ENST00000584525 DLGAP5Q15398 846 aa16.64■□□□□ 0.25
CDK5RAP3-234ENST00000584525 NOM1Q5C9Z4 860 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-234ENST00000584525 SPRYD7Q5W111 196 aa16.64■□□□□ 0.25
CDK5RAP3-234ENST00000584525 FBXO46Q6PJ61 603 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-234ENST00000584525 PLA2G12BQ9BX93 195 aa16.64■□□□□ 0.25
CDK5RAP3-234ENST00000584525 DEFB129Q9H1M3 183 aa16.64■□□□□ 0.25
CDK5RAP3-234ENST00000584525 R3HDMLQ9H3Y0 253 aa16.64■□□□□ 0.25
CDK5RAP3-234ENST00000584525 CD209Q9NNX6 404 aa16.64■□□□□ 0.25
CDK5RAP3-234ENST00000584525 CSF1RP07333 972 aa16.63■□□□□ 0.25
CDK5RAP3-234ENST00000584525 LDLRAD1Q5T700 205 aa16.63■□□□□ 0.25
CDK5RAP3-234ENST00000584525 SLC10A4Q96EP9 437 aa16.63■□□□□ 0.25
CDK5RAP3-234ENST00000584525 ZBED3Q96IU2 234 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-234ENST00000584525 FZD1Q9UP38 647 aa16.63■□□□□ 0.25
CDK5RAP3-234ENST00000584525 ANKRD18BA2A2Z9 1011 aa16.62■□□□□ 0.25
CDK5RAP3-234ENST00000584525 ALDH1A1P00352 501 aa16.62■□□□□ 0.25
CDK5RAP3-234ENST00000584525 FLIIQ13045 1269 aa16.62■□□□□ 0.25
CDK5RAP3-234ENST00000584525 FKBP5Q13451 457 aaPredicted RBP16.62■□□□□ 0.25
CDK5RAP3-234ENST00000584525 F8W031 263 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-234ENST00000584525 SNAP23O00161 211 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms