RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 RIPOR2Q9Y4F9 1068 aa33.98■■■■□ 3.03
SMARCD2-210ENST00000584400 UBE4AQ14139 1066 aa33.97■■■■□ 3.03
SMARCD2-210ENST00000584400 CLUAP1Q96AJ1 413 aa33.97■■■■□ 3.03
SMARCD2-210ENST00000584400 MEIS3Q99687 375 aa33.97■■■■□ 3.03
SMARCD2-210ENST00000584400 STRIP1Q5VSL9 837 aa33.96■■■■□ 3.03
SMARCD2-210ENST00000584400 ZNF804AQ7Z570 1209 aa33.96■■■■□ 3.03
SMARCD2-210ENST00000584400 PUS3Q9BZE2 481 aaKnown RBP33.96■■■■□ 3.03
SMARCD2-210ENST00000584400 LRRFIP2Q9Y608 721 aaKnown RBP33.96■■■■□ 3.03
SMARCD2-210ENST00000584400 ZNF609O15014 1411 aa33.96■■■■□ 3.03
SMARCD2-210ENST00000584400 ADAMTSL1Q8N6G6 1762 aa33.95■■■■□ 3.03
SMARCD2-210ENST00000584400 ITGBL1O95965 494 aaPredicted RBP33.95■■■■□ 3.03
SMARCD2-210ENST00000584400 KLRK1P26718 216 aa33.95■■■■□ 3.03
SMARCD2-210ENST00000584400 FTSJ3Q8IY81 847 aaKnown RBP33.95■■■■□ 3.03
SMARCD2-210ENST00000584400 MYO3BQ8WXR4 1341 aa33.95■■■■□ 3.03
SMARCD2-210ENST00000584400 METTL24Q5JXM2 366 aa33.94■■■■□ 3.02
SMARCD2-210ENST00000584400 CD209Q9NNX6 404 aa33.94■■■■□ 3.02
SMARCD2-210ENST00000584400 PASKQ96RG2 1323 aa33.94■■■■□ 3.02
SMARCD2-210ENST00000584400 FBXW7Q969H0 707 aa33.93■■■■□ 3.02
SMARCD2-210ENST00000584400 FBXO3Q9UK99 471 aa33.93■■■■□ 3.02
SMARCD2-210ENST00000584400 SNAP23O00161 211 aa33.92■■■■□ 3.02
SMARCD2-210ENST00000584400 TTLL5Q6EMB2 1281 aa33.92■■■■□ 3.02
SMARCD2-210ENST00000584400 MMP14P50281 582 aa33.91■■■■□ 3.02
SMARCD2-210ENST00000584400 LRRC24Q50LG9 513 aa33.91■■■■□ 3.02
SMARCD2-210ENST00000584400 CREBZFQ9NS37 354 aa33.91■■■■□ 3.02
SMARCD2-210ENST00000584400 PGAP2Q9UHJ9 254 aa33.91■■■■□ 3.02
SMARCD2-210ENST00000584400 IRS2Q9Y4H2 1338 aa33.9■■■■□ 3.02
SMARCD2-210ENST00000584400 EYA2O00167 538 aa33.9■■■■□ 3.02
SMARCD2-210ENST00000584400 USP17L8P0C7I0 530 aa33.9■■■■□ 3.02
SMARCD2-210ENST00000584400 RFX5P48382 616 aaPredicted RBP33.9■■■■□ 3.02
SMARCD2-210ENST00000584400 DACT2Q5SW24 774 aa33.9■■■■□ 3.02
SMARCD2-210ENST00000584400 SAMD7Q7Z3H4 446 aa33.9■■■■□ 3.02
SMARCD2-210ENST00000584400 KLHDC4Q8TBB5 520 aa33.9■■■■□ 3.02
SMARCD2-210ENST00000584400 TRPM4Q8TD43 1214 aa33.9■■■■□ 3.02
SMARCD2-210ENST00000584400 SHTN1A0MZ66 631 aa33.89■■■■□ 3.02
SMARCD2-210ENST00000584400 PDE8BO95263 885 aa33.89■■■■□ 3.02
SMARCD2-210ENST00000584400 PTPN12Q05209 780 aaKnown RBP33.89■■■■□ 3.02
SMARCD2-210ENST00000584400 DZIP1LQ8IYY4 767 aaKnown RBP33.89■■■■□ 3.02
SMARCD2-210ENST00000584400 OGFOD1Q8N543 542 aa33.89■■■■□ 3.02
SMARCD2-210ENST00000584400 TMEM57Q8N5G2 664 aa33.89■■■■□ 3.02
SMARCD2-210ENST00000584400 TNNQ9UQP3 1299 aa33.89■■■■□ 3.02
SMARCD2-210ENST00000584400 GNAI2P04899 355 aa33.88■■■■□ 3.01
SMARCD2-210ENST00000584400 IL1R1P14778 569 aa33.88■■■■□ 3.01
SMARCD2-210ENST00000584400 HIRAP54198 1017 aaPredicted RBP33.88■■■■□ 3.01
SMARCD2-210ENST00000584400 ZNF280AP59817 542 aaPredicted RBP33.88■■■■□ 3.01
SMARCD2-210ENST00000584400 TBC1D10BQ4KMP7 808 aaPredicted RBP33.88■■■■□ 3.01
SMARCD2-210ENST00000584400 GMLQ99445 158 aa33.88■■■■□ 3.01
SMARCD2-210ENST00000584400 MS4A1P11836 297 aa33.87■■■■□ 3.01
SMARCD2-210ENST00000584400 GTF2IP78347 998 aa33.87■■■■□ 3.01
SMARCD2-210ENST00000584400 KIF4BQ2VIQ3 1234 aa33.87■■■■□ 3.01
SMARCD2-210ENST00000584400 RBM26Q5T8P6 1007 aaKnown RBP33.87■■■■□ 3.01
SMARCD2-210ENST00000584400 SCN9AQ15858 1988 aa33.86■■■■□ 3.01
SMARCD2-210ENST00000584400 TMEM88BA6NKF7 163 aa33.86■■■■□ 3.01
SMARCD2-210ENST00000584400 HTRA3P83110 453 aa33.86■■■■□ 3.01
SMARCD2-210ENST00000584400 DNAJC5GQ8N7S2 189 aa33.86■■■■□ 3.01
SMARCD2-210ENST00000584400 CIAO1O76071 339 aa33.85■■■■□ 3.01
SMARCD2-210ENST00000584400 HIBADHP31937 336 aaKnown RBP33.85■■■■□ 3.01
SMARCD2-210ENST00000584400 CAVIN4Q5BKX8 364 aa33.85■■■■□ 3.01
SMARCD2-210ENST00000584400 CDC37L1Q7L3B6 337 aa33.85■■■■□ 3.01
SMARCD2-210ENST00000584400 VPS37DQ86XT2 251 aa33.84■■■■□ 3.01
SMARCD2-210ENST00000584400 VGLL2Q8N8G2 317 aa33.84■■■■□ 3.01
SMARCD2-210ENST00000584400 HDAC9Q9UKV0 1011 aa33.84■■■■□ 3.01
SMARCD2-210ENST00000584400 MTX1Q13505 466 aa33.83■■■■□ 3.01
SMARCD2-210ENST00000584400 PUM3Q15397 648 aaKnown RBP33.83■■■■□ 3.01
SMARCD2-210ENST00000584400 DCPSQ96C86 337 aaKnown RBP33.83■■■■□ 3.01
SMARCD2-210ENST00000584400 KLRG1Q96E93 195 aa33.83■■■■□ 3.01
SMARCD2-210ENST00000584400 MYOZ2Q9NPC6 264 aa33.83■■■■□ 3.01
SMARCD2-210ENST00000584400 SRGAP3O43295 1099 aa33.82■■■■□ 3
SMARCD2-210ENST00000584400 SASH1O94885 1247 aa33.82■■■■□ 3
SMARCD2-210ENST00000584400 IFIT1P09914 478 aaKnown RBP33.82■■■■□ 3
SMARCD2-210ENST00000584400 ITPRIPQ8IWB1 547 aa33.82■■■■□ 3
SMARCD2-210ENST00000584400 COPRSQ9NQ92 184 aa33.82■■■■□ 3
SMARCD2-210ENST00000584400 IL15P40933 162 aaPredicted RBP33.81■■■■□ 3
SMARCD2-210ENST00000584400 FKBP1AP62942 108 aaKnown RBP33.81■■■■□ 3
SMARCD2-210ENST00000584400 SIL1Q9H173 461 aa33.81■■■■□ 3
SMARCD2-210ENST00000584400 PSME4Q14997 1843 aa33.81■■■■□ 3
SMARCD2-210ENST00000584400 A0A1B0GUL6 1792 aa33.8■■■■□ 3
SMARCD2-210ENST00000584400 EGFRP00533 1210 aa33.8■■■■□ 3
SMARCD2-210ENST00000584400 GYG1P46976 350 aa33.8■■■■□ 3
SMARCD2-210ENST00000584400 FAM84BQ96KN1 310 aaPredicted RBP33.8■■■■□ 3
SMARCD2-210ENST00000584400 MXD3Q9BW11 206 aa33.8■■■■□ 3
SMARCD2-210ENST00000584400 CEP126Q9P2H0 1117 aa33.8■■■■□ 3
SMARCD2-210ENST00000584400 RCAN3Q9UKA8 241 aa33.8■■■■□ 3
SMARCD2-210ENST00000584400 ATG9AQ7Z3C6 839 aa33.79■■■■□ 3
SMARCD2-210ENST00000584400 TDRD7Q8NHU6 1098 aaKnown RBP33.79■■■■□ 3
SMARCD2-210ENST00000584400 SLC5A1P13866 664 aa33.78■■■■□ 3
SMARCD2-210ENST00000584400 LPIN2Q92539 896 aa33.78■■■■□ 3
SMARCD2-210ENST00000584400 GLIS2Q9BZE0 524 aaPredicted RBP33.78■■■■□ 3
SMARCD2-210ENST00000584400 FBXO33Q7Z6M2 555 aa33.77■■■■□ 3
SMARCD2-210ENST00000584400 SCARF1Q14162 830 aa33.76■■■□□ 2.99
SMARCD2-210ENST00000584400 KRT26Q7Z3Y9 468 aa33.76■■■□□ 2.99
SMARCD2-210ENST00000584400 KIAA0825Q8IV33 1275 aa33.76■■■□□ 2.99
SMARCD2-210ENST00000584400 TRAF5O00463 557 aa33.75■■■□□ 2.99
SMARCD2-210ENST00000584400 FRAT2O75474 233 aaPredicted RBP33.75■■■□□ 2.99
SMARCD2-210ENST00000584400 FGFR2P21802 821 aa33.75■■■□□ 2.99
SMARCD2-210ENST00000584400 SULF1Q8IWU6 871 aa33.75■■■□□ 2.99
SMARCD2-210ENST00000584400 PA2G4Q9UQ80 394 aaKnown RBP33.75■■■□□ 2.99
SMARCD2-210ENST00000584400 FAM205AQ6ZU69 1335 aa33.75■■■□□ 2.99
SMARCD2-210ENST00000584400 RLBP1P12271 317 aa33.74■■■□□ 2.99
SMARCD2-210ENST00000584400 USP48Q86UV5 1035 aa33.74■■■□□ 2.99
SMARCD2-210ENST00000584400 GGA3Q9NZ52 723 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms