RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 USP44Q9H0E7 712 aa18.6■□□□□ 0.57
SCN4A-203ENST00000584310 ZBED9Q6R2W3 1325 aa18.59■□□□□ 0.57
SCN4A-203ENST00000584310 TAF5LO75529 589 aa18.59■□□□□ 0.57
SCN4A-203ENST00000584310 UBE4AQ14139 1066 aa18.59■□□□□ 0.57
SCN4A-203ENST00000584310 RABL6Q3YEC7 729 aaPredicted RBP18.59■□□□□ 0.57
SCN4A-203ENST00000584310 TBC1D10BQ4KMP7 808 aaPredicted RBP18.59■□□□□ 0.57
SCN4A-203ENST00000584310 METTL24Q5JXM2 366 aa18.59■□□□□ 0.57
SCN4A-203ENST00000584310 TTLL5Q6EMB2 1281 aa18.59■□□□□ 0.57
SCN4A-203ENST00000584310 SULF1Q8IWU6 871 aa18.59■□□□□ 0.57
SCN4A-203ENST00000584310 DNAJC5GQ8N7S2 189 aa18.59■□□□□ 0.57
SCN4A-203ENST00000584310 HELBQ8NG08 1087 aaPredicted RBP18.59■□□□□ 0.57
SCN4A-203ENST00000584310 ZNF594Q96JF6 807 aaPredicted RBP18.59■□□□□ 0.57
SCN4A-203ENST00000584310 CAVIN4Q5BKX8 364 aa18.58■□□□□ 0.56
SCN4A-203ENST00000584310 PAXIP1Q6ZW49 1069 aaPredicted RBP18.58■□□□□ 0.56
SCN4A-203ENST00000584310 SAMD7Q7Z3H4 446 aa18.58■□□□□ 0.56
SCN4A-203ENST00000584310 KCNQ5Q9NR82 932 aa18.58■□□□□ 0.56
SCN4A-203ENST00000584310 LTBP1Q14766 1721 aa18.57■□□□□ 0.56
SCN4A-203ENST00000584310 FRAT2O75474 233 aaPredicted RBP18.57■□□□□ 0.56
SCN4A-203ENST00000584310 C15orf52Q6ZUT6 534 aaKnown RBP18.57■□□□□ 0.56
SCN4A-203ENST00000584310 FTSJ3Q8IY81 847 aaKnown RBP18.57■□□□□ 0.56
SCN4A-203ENST00000584310 TRPM4Q8TD43 1214 aa18.57■□□□□ 0.56
SCN4A-203ENST00000584310 MKRN1Q9UHC7 482 aaKnown RBP18.57■□□□□ 0.56
SCN4A-203ENST00000584310 COL4A1P02462 1669 aa18.57■□□□□ 0.56
SCN4A-203ENST00000584310 ECE1P42892 770 aa18.56■□□□□ 0.56
SCN4A-203ENST00000584310 DEFB115Q30KQ5 88 aa18.56■□□□□ 0.56
SCN4A-203ENST00000584310 ZKSCAN2Q63HK3 967 aa18.56■□□□□ 0.56
SCN4A-203ENST00000584310 ATF7IPQ6VMQ6 1270 aa18.56■□□□□ 0.56
SCN4A-203ENST00000584310 KRT26Q7Z3Y9 468 aa18.56■□□□□ 0.56
SCN4A-203ENST00000584310 ZNF408Q9H9D4 720 aa18.56■□□□□ 0.56
SCN4A-203ENST00000584310 CD209Q9NNX6 404 aa18.56■□□□□ 0.56
SCN4A-203ENST00000584310 PGAP2Q9UHJ9 254 aa18.56■□□□□ 0.56
SCN4A-203ENST00000584310 ZNF609O15014 1411 aa18.56■□□□□ 0.56
SCN4A-203ENST00000584310 CELF2O95319 508 aaKnown RBP18.55■□□□□ 0.56
SCN4A-203ENST00000584310 ZNF280AP59817 542 aaPredicted RBP18.55■□□□□ 0.56
SCN4A-203ENST00000584310 GTF2IP78347 998 aa18.55■□□□□ 0.56
SCN4A-203ENST00000584310 MYOZ2Q9NPC6 264 aa18.55■□□□□ 0.56
SCN4A-203ENST00000584310 FBXO3Q9UK99 471 aa18.55■□□□□ 0.56
SCN4A-203ENST00000584310 IFIT1P09914 478 aaKnown RBP18.54■□□□□ 0.56
SCN4A-203ENST00000584310 HIBADHP31937 336 aaKnown RBP18.54■□□□□ 0.56
SCN4A-203ENST00000584310 DACT2Q5SW24 774 aa18.54■□□□□ 0.56
SCN4A-203ENST00000584310 INTS3Q68E01 1043 aaKnown RBP18.54■□□□□ 0.56
SCN4A-203ENST00000584310 JMYQ8N9B5 988 aa18.54■□□□□ 0.56
SCN4A-203ENST00000584310 KAZALD1Q96I82 304 aa18.54■□□□□ 0.56
SCN4A-203ENST00000584310 GLIS2Q9BZE0 524 aaPredicted RBP18.54■□□□□ 0.56
SCN4A-203ENST00000584310 MYO1BO43795 1136 aa18.53■□□□□ 0.56
SCN4A-203ENST00000584310 HIRAP54198 1017 aaPredicted RBP18.53■□□□□ 0.56
SCN4A-203ENST00000584310 USP48Q86UV5 1035 aa18.53■□□□□ 0.56
SCN4A-203ENST00000584310 TXNRD3Q86VQ6 643 aa18.53■□□□□ 0.56
SCN4A-203ENST00000584310 ANKRD44Q8N8A2 993 aa18.53■□□□□ 0.56
SCN4A-203ENST00000584310 AIDAQ96BJ3 306 aa18.53■□□□□ 0.56
SCN4A-203ENST00000584310 GGA3Q9NZ52 723 aa18.53■□□□□ 0.56
SCN4A-203ENST00000584310 SPEF2Q9C093 1822 aa18.53■□□□□ 0.56
SCN4A-203ENST00000584310 CNTNAP1P78357 1384 aa18.53■□□□□ 0.56
SCN4A-203ENST00000584310 ADAMTSL1Q8N6G6 1762 aa18.53■□□□□ 0.56
SCN4A-203ENST00000584310 TRAF5O00463 557 aa18.52■□□□□ 0.56
SCN4A-203ENST00000584310 MS4A1P11836 297 aa18.52■□□□□ 0.56
SCN4A-203ENST00000584310 SCARF1Q14162 830 aa18.52■□□□□ 0.56
SCN4A-203ENST00000584310 PUM3Q15397 648 aaKnown RBP18.52■□□□□ 0.56
SCN4A-203ENST00000584310 C2orf69Q8N8R5 385 aa18.52■□□□□ 0.56
SCN4A-203ENST00000584310 RIPOR2Q9Y4F9 1068 aa18.52■□□□□ 0.56
SCN4A-203ENST00000584310 SHTN1A0MZ66 631 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 RASSF10A6NK89 507 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 EYA2O00167 538 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 BCAR3O75815 825 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 PDE8BO95263 885 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 SLC5A1P13866 664 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 TRIM27P14373 513 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 IL1R1P14778 569 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 KLRK1P26718 216 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 NF2P35240 595 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 KIAA0825Q8IV33 1275 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 BEGAINQ9BUH8 593 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 PUS3Q9BZE2 481 aaKnown RBP18.51■□□□□ 0.55
SCN4A-203ENST00000584310 CEP126Q9P2H0 1117 aa18.51■□□□□ 0.55
SCN4A-203ENST00000584310 LRRFIP2Q9Y608 721 aaKnown RBP18.51■□□□□ 0.55
SCN4A-203ENST00000584310 WTIPA6NIX2 430 aaPredicted RBP18.5■□□□□ 0.55
SCN4A-203ENST00000584310 SASH1O94885 1247 aa18.5■□□□□ 0.55
SCN4A-203ENST00000584310 GNAI2P04899 355 aa18.5■□□□□ 0.55
SCN4A-203ENST00000584310 FKBP1AP62942 108 aaKnown RBP18.5■□□□□ 0.55
SCN4A-203ENST00000584310 CLUAP1Q96AJ1 413 aa18.5■□□□□ 0.55
SCN4A-203ENST00000584310 GMLQ99445 158 aa18.5■□□□□ 0.55
SCN4A-203ENST00000584310 PITPNM2Q9BZ72 1349 aa18.49■□□□□ 0.55
SCN4A-203ENST00000584310 CIAO1O76071 339 aa18.49■□□□□ 0.55
SCN4A-203ENST00000584310 DLGAP5Q15398 846 aa18.49■□□□□ 0.55
SCN4A-203ENST00000584310 ANGEL2Q5VTE6 544 aaKnown RBP18.49■□□□□ 0.55
SCN4A-203ENST00000584310 TBC1D22AQ8WUA7 517 aa18.49■□□□□ 0.55
SCN4A-203ENST00000584310 GNL3LQ9NVN8 582 aaKnown RBP18.49■□□□□ 0.55
SCN4A-203ENST00000584310 SNAP23O00161 211 aa18.48■□□□□ 0.55
SCN4A-203ENST00000584310 IL15P40933 162 aaPredicted RBP18.48■□□□□ 0.55
SCN4A-203ENST00000584310 GYG1P46976 350 aa18.48■□□□□ 0.55
SCN4A-203ENST00000584310 RBM5P52756 815 aaKnown RBP eCLIP18.48■□□□□ 0.55
SCN4A-203ENST00000584310 MAP2K1Q02750 393 aaPredicted RBP18.48■□□□□ 0.55
SCN4A-203ENST00000584310 GRM1Q13255 1194 aa18.48■□□□□ 0.55
SCN4A-203ENST00000584310 LRRC24Q50LG9 513 aa18.48■□□□□ 0.55
SCN4A-203ENST00000584310 APOBEC3FQ8IUX4 373 aaKnown RBP18.48■□□□□ 0.55
SCN4A-203ENST00000584310 LPIN2Q92539 896 aa18.48■□□□□ 0.55
SCN4A-203ENST00000584310 MEIS3Q99687 375 aa18.48■□□□□ 0.55
SCN4A-203ENST00000584310 TLL2Q9Y6L7 1015 aa18.48■□□□□ 0.55
SCN4A-203ENST00000584310 SRGAP3O43295 1099 aa18.47■□□□□ 0.55
SCN4A-203ENST00000584310 DZIP1LQ8IYY4 767 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms