RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 USP17L4A6NCW7 530 aa26.3■■□□□ 1.8
SRSF1-206ENST00000583741 USP17L1Q7RTZ2 530 aa26.3■■□□□ 1.8
SRSF1-206ENST00000583741 PODNQ7Z5L7 613 aa26.3■■□□□ 1.8
SRSF1-206ENST00000583741 PITPNM2Q9BZ72 1349 aa26.29■■□□□ 1.8
SRSF1-206ENST00000583741 MED23Q9ULK4 1368 aa26.29■■□□□ 1.8
SRSF1-206ENST00000583741 MOB2Q70IA6 237 aa26.29■■□□□ 1.8
SRSF1-206ENST00000583741 TTLL11Q8NHH1 800 aa26.29■■□□□ 1.8
SRSF1-206ENST00000583741 CDC5LQ99459 802 aaKnown RBP26.29■■□□□ 1.8
SRSF1-206ENST00000583741 GREM2Q9H772 168 aa26.29■■□□□ 1.8
SRSF1-206ENST00000583741 MXD3Q9BW11 206 aa26.28■■□□□ 1.8
SRSF1-206ENST00000583741 PI4KAP2A4QPH2 592 aa26.27■■□□□ 1.8
SRSF1-206ENST00000583741 FKBP1BP68106 108 aa26.27■■□□□ 1.8
SRSF1-206ENST00000583741 KSR2Q6VAB6 950 aa26.27■■□□□ 1.8
SRSF1-206ENST00000583741 PI4KAP1Q8N8J0 262 aa26.27■■□□□ 1.8
SRSF1-206ENST00000583741 MINPP1Q9UNW1 487 aa26.27■■□□□ 1.8
SRSF1-206ENST00000583741 NBPF9Q3BBW0 867 aa26.26■■□□□ 1.79
SRSF1-206ENST00000583741 BSDC1Q9NW68 430 aaPredicted RBP26.26■■□□□ 1.79
SRSF1-206ENST00000583741 CWF19L2Q2TBE0 894 aaKnown RBP26.25■■□□□ 1.79
SRSF1-206ENST00000583741 DACT2Q5SW24 774 aa26.25■■□□□ 1.79
SRSF1-206ENST00000583741 PRAMEF18Q5VWM3 479 aa26.25■■□□□ 1.79
SRSF1-206ENST00000583741 TSR2Q969E8 191 aaKnown RBP26.24■■□□□ 1.79
SRSF1-206ENST00000583741 CCT4P50991 539 aaKnown RBP26.23■■□□□ 1.79
SRSF1-206ENST00000583741 SOX10P56693 466 aa26.23■■□□□ 1.79
SRSF1-206ENST00000583741 TXNRD3Q86VQ6 643 aa26.23■■□□□ 1.79
SRSF1-206ENST00000583741 UBE2Q2LH0YL09 131 aa26.23■■□□□ 1.79
SRSF1-206ENST00000583741 REM2Q8IYK8 340 aaPredicted RBP26.23■■□□□ 1.79
SRSF1-206ENST00000583741 CHMP4AQ9BY43 222 aa26.23■■□□□ 1.79
SRSF1-206ENST00000583741 NEURL1BA8MQ27 555 aa26.22■■□□□ 1.79
SRSF1-206ENST00000583741 CTU1Q7Z7A3 348 aaKnown RBP26.22■■□□□ 1.79
SRSF1-206ENST00000583741 NEXNQ0ZGT2 675 aa26.21■■□□□ 1.79
SRSF1-206ENST00000583741 G2E3Q7L622 706 aa26.21■■□□□ 1.79
SRSF1-206ENST00000583741 FBXW7Q969H0 707 aa26.21■■□□□ 1.79
SRSF1-206ENST00000583741 WNT10BO00744 389 aa26.2■■□□□ 1.78
SRSF1-206ENST00000583741 KLRK1P26718 216 aa26.2■■□□□ 1.78
SRSF1-206ENST00000583741 UBE3BQ7Z3V4 1068 aa26.2■■□□□ 1.78
SRSF1-206ENST00000583741 SASH1O94885 1247 aa26.19■■□□□ 1.78
SRSF1-206ENST00000583741 STRIP1Q5VSL9 837 aa26.19■■□□□ 1.78
SRSF1-206ENST00000583741 OGFOD1Q8N543 542 aa26.19■■□□□ 1.78
SRSF1-206ENST00000583741 STK31Q9BXU1 1019 aa26.19■■□□□ 1.78
SRSF1-206ENST00000583741 COA1Q9GZY4 146 aa26.19■■□□□ 1.78
SRSF1-206ENST00000583741 MYO3BQ8WXR4 1341 aa26.18■■□□□ 1.78
SRSF1-206ENST00000583741 H7C1W4 665 aa26.18■■□□□ 1.78
SRSF1-206ENST00000583741 TTLL12Q14166 644 aaPredicted RBP26.17■■□□□ 1.78
SRSF1-206ENST00000583741 LEMD3Q9Y2U8 911 aa26.17■■□□□ 1.78
SRSF1-206ENST00000583741 TBC1D8O95759 1140 aa26.16■■□□□ 1.78
SRSF1-206ENST00000583741 IGHMBP2P38935 993 aaKnown RBP26.16■■□□□ 1.78
SRSF1-206ENST00000583741 HNRNPUQ00839 825 aaKnown RBP eCLIP26.16■■□□□ 1.78
SRSF1-206ENST00000583741 A0A1B0GUL6 1792 aa26.15■■□□□ 1.78
SRSF1-206ENST00000583741 ZNF804BA4D1E1 1349 aa26.15■■□□□ 1.78
SRSF1-206ENST00000583741 ITGA6P23229 1130 aa26.15■■□□□ 1.78
SRSF1-206ENST00000583741 MKRN3Q13064 507 aaKnown RBP26.15■■□□□ 1.78
SRSF1-206ENST00000583741 TWISTNBQ3B726 338 aaPredicted RBP26.15■■□□□ 1.78
SRSF1-206ENST00000583741 ZNF296Q8WUU4 475 aaPredicted RBP26.15■■□□□ 1.78
SRSF1-206ENST00000583741 SLC4A2P04920 1241 aa26.14■■□□□ 1.78
SRSF1-206ENST00000583741 CASP7P55210 303 aa26.14■■□□□ 1.78
SRSF1-206ENST00000583741 GCKRQ14397 625 aa26.14■■□□□ 1.78
SRSF1-206ENST00000583741 TTLL5Q6EMB2 1281 aa26.14■■□□□ 1.78
SRSF1-206ENST00000583741 KIAA0825Q8IV33 1275 aa26.14■■□□□ 1.78
SRSF1-206ENST00000583741 PLA2G12BQ9BX93 195 aa26.14■■□□□ 1.78
SRSF1-206ENST00000583741 HPS5Q9UPZ3 1129 aa26.14■■□□□ 1.78
SRSF1-206ENST00000583741 HTTP42858 3142 aa26.13■■□□□ 1.77
SRSF1-206ENST00000583741 TM4SF4P48230 202 aa26.12■■□□□ 1.77
SRSF1-206ENST00000583741 ZBED3Q96IU2 234 aaPredicted RBP26.12■■□□□ 1.77
SRSF1-206ENST00000583741 NF2P35240 595 aa26.11■■□□□ 1.77
SRSF1-206ENST00000583741 PTPN12Q05209 780 aaKnown RBP26.11■■□□□ 1.77
SRSF1-206ENST00000583741 PRKG1Q13976 671 aa26.11■■□□□ 1.77
SRSF1-206ENST00000583741 WWC1Q8IX03 1113 aa26.11■■□□□ 1.77
SRSF1-206ENST00000583741 MPHOSPH8Q99549 860 aa26.11■■□□□ 1.77
SRSF1-206ENST00000583741 ANKRD2Q9GZV1 360 aa26.11■■□□□ 1.77
SRSF1-206ENST00000583741 CSF1RP07333 972 aa26.11■■□□□ 1.77
SRSF1-206ENST00000583741 GTF2IP78347 998 aa26.11■■□□□ 1.77
SRSF1-206ENST00000583741 FLIIQ13045 1269 aa26.11■■□□□ 1.77
SRSF1-206ENST00000583741 CCDC27Q2M243 656 aa26.11■■□□□ 1.77
SRSF1-206ENST00000583741 HDAC9Q9UKV0 1011 aa26.11■■□□□ 1.77
SRSF1-206ENST00000583741 CACNA1FO60840 1977 aa26.1■■□□□ 1.77
SRSF1-206ENST00000583741 ECM29Q5VYK3 1845 aa26.1■■□□□ 1.77
SRSF1-206ENST00000583741 CHRNDQ07001 517 aa26.1■■□□□ 1.77
SRSF1-206ENST00000583741 APOBEC3FQ8IUX4 373 aaKnown RBP26.1■■□□□ 1.77
SRSF1-206ENST00000583741 SNAP23O00161 211 aa26.09■■□□□ 1.77
SRSF1-206ENST00000583741 MMP14P50281 582 aa26.09■■□□□ 1.77
SRSF1-206ENST00000583741 FZD1Q9UP38 647 aa26.09■■□□□ 1.77
SRSF1-206ENST00000583741 IRS2Q9Y4H2 1338 aa26.08■■□□□ 1.77
SRSF1-206ENST00000583741 GPR25O00155 361 aa26.08■■□□□ 1.77
SRSF1-206ENST00000583741 DNAAF4Q8WXU2 420 aa26.08■■□□□ 1.77
SRSF1-206ENST00000583741 CENPFP49454 3210 aa26.08■■□□□ 1.77
SRSF1-206ENST00000583741 FKBP5Q13451 457 aaPredicted RBP26.07■■□□□ 1.76
SRSF1-206ENST00000583741 PKN2Q16513 984 aaKnown RBP26.07■■□□□ 1.76
SRSF1-206ENST00000583741 ARMC9Q7Z3E5 817 aa26.07■■□□□ 1.76
SRSF1-206ENST00000583741 CERS5Q8N5B7 392 aa26.07■■□□□ 1.76
SRSF1-206ENST00000583741 R3HDMLQ9H3Y0 253 aa26.07■■□□□ 1.76
SRSF1-206ENST00000583741 MYH16Q9H6N6 1097 aa26.07■■□□□ 1.76
SRSF1-206ENST00000583741 CD209Q9NNX6 404 aa26.07■■□□□ 1.76
SRSF1-206ENST00000583741 KCNJ4P48050 445 aa26.06■■□□□ 1.76
SRSF1-206ENST00000583741 NOM1Q5C9Z4 860 aaKnown RBP26.06■■□□□ 1.76
SRSF1-206ENST00000583741 LDLRAD1Q5T700 205 aa26.06■■□□□ 1.76
SRSF1-206ENST00000583741 LINS1Q8NG48 757 aa26.06■■□□□ 1.76
SRSF1-206ENST00000583741 SSC5DA1L4H1 1573 aa26.06■■□□□ 1.76
SRSF1-206ENST00000583741 COL1A1P02452 1464 aaPredicted RBP26.05■■□□□ 1.76
SRSF1-206ENST00000583741 LAMB1P07942 1786 aa26.05■■□□□ 1.76
SRSF1-206ENST00000583741 SREBF2Q12772 1141 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms