RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 CCT4P50991 539 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-229ENST00000583697 GCKRQ14397 625 aa11.1□□□□□ -0.63
CDK5RAP3-229ENST00000583697 FAM161AQ3B820 660 aa11.1□□□□□ -0.63
CDK5RAP3-229ENST00000583697 RGMBQ6NW40 437 aa11.1□□□□□ -0.63
CDK5RAP3-229ENST00000583697 LINS1Q8NG48 757 aa11.1□□□□□ -0.63
CDK5RAP3-229ENST00000583697 CDCA5Q96FF9 252 aa11.1□□□□□ -0.63
CDK5RAP3-229ENST00000583697 MPHOSPH8Q99549 860 aa11.1□□□□□ -0.63
CDK5RAP3-229ENST00000583697 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
CDK5RAP3-229ENST00000583697 MINPP1Q9UNW1 487 aa11.1□□□□□ -0.63
CDK5RAP3-229ENST00000583697 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-229ENST00000583697 PITPNM2Q9BZ72 1349 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 ECM29Q5VYK3 1845 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 ZNF157P51786 506 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 ZNF280AP59817 542 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 DLK2Q6UY11 383 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 WDR63Q8IWG1 891 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 ABHD8Q96I13 439 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 ANKRD2Q9GZV1 360 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 COA1Q9GZY4 146 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 CHMP3Q9Y3E7 222 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 AKAP11Q9UKA4 1901 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 ARAP2Q8WZ64 1704 aa11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 ASTN2O75129 1339 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-229ENST00000583697 ANKRD18BA2A2Z9 1011 aa11.08□□□□□ -0.64
CDK5RAP3-229ENST00000583697 H7C1W4 665 aa11.08□□□□□ -0.64
CDK5RAP3-229ENST00000583697 EXOSC9Q06265 439 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-229ENST00000583697 SCARF1Q14162 830 aa11.08□□□□□ -0.64
CDK5RAP3-229ENST00000583697 CCDC102AQ96A19 550 aa11.08□□□□□ -0.64
CDK5RAP3-229ENST00000583697 PLA2G12BQ9BX93 195 aa11.08□□□□□ -0.64
CDK5RAP3-229ENST00000583697 ZNF804BA4D1E1 1349 aa11.08□□□□□ -0.64
CDK5RAP3-229ENST00000583697 STRIP1Q5VSL9 837 aa11.07□□□□□ -0.64
CDK5RAP3-229ENST00000583697 COL1A1P02452 1464 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 FAM155AB1AL88 458 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 VAMP4O75379 141 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 SLC10A3P09131 477 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 NF2P35240 595 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 FKBP1BP68106 108 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 CHRNDQ07001 517 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 IFIT5Q13325 482 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 TAF7LQ5H9L4 462 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 DACT2Q5SW24 774 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 FAM9BQ8IZU0 186 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 GMLQ99445 158 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 SAGE1Q9NXZ1 904 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 HDAC9Q9UKV0 1011 aa11.06□□□□□ -0.64
CDK5RAP3-229ENST00000583697 F6X3S4 739 aa11.05□□□□□ -0.64
CDK5RAP3-229ENST00000583697 CSF1RP07333 972 aa11.05□□□□□ -0.64
CDK5RAP3-229ENST00000583697 CASP7P55210 303 aa11.05□□□□□ -0.64
CDK5RAP3-229ENST00000583697 KIF23Q02241 960 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-229ENST00000583697 WTIPA6NIX2 430 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 CCDC85CA6NKD9 419 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 GRM8O00222 908 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 WNT10BO00744 389 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 SASH1O94885 1247 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 KLRK1P26718 216 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 MMP14P50281 582 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 GTF2IP78347 998 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 DGKZQ13574 1117 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 CCDC57Q2TAC2 916 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 NBPF9Q3BBW0 867 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 TTLL5Q6EMB2 1281 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 TXNRD3Q86VQ6 643 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 RASAL3Q86YV0 1011 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 APOBEC3FQ8IUX4 373 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 KIAA0825Q8IV33 1275 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 ZIC5Q96T25 663 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 MXD3Q9BW11 206 aa11.04□□□□□ -0.64
CDK5RAP3-229ENST00000583697 CASP8AP2Q9UKL3 1982 aa11.03□□□□□ -0.64
CDK5RAP3-229ENST00000583697 BEND3Q5T5X7 828 aa11.03□□□□□ -0.64
CDK5RAP3-229ENST00000583697 SLC4A10Q6U841 1118 aa11.03□□□□□ -0.64
CDK5RAP3-229ENST00000583697 ZNF804AQ7Z570 1209 aa11.03□□□□□ -0.64
CDK5RAP3-229ENST00000583697 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-229ENST00000583697 MCOLN1Q9GZU1 580 aa11.03□□□□□ -0.64
CDK5RAP3-229ENST00000583697 CNNM1Q9NRU3 951 aa11.03□□□□□ -0.64
CDK5RAP3-229ENST00000583697 C9orf78Q9NZ63 289 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-229ENST00000583697 SCAF8Q9UPN6 1271 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-229ENST00000583697 FOXO4P98177 505 aa11.02□□□□□ -0.65
CDK5RAP3-229ENST00000583697 LMBR1LQ6UX01 489 aa11.02□□□□□ -0.65
CDK5RAP3-229ENST00000583697 SRCIN1Q9C0H9 1055 aa11.02□□□□□ -0.65
CDK5RAP3-229ENST00000583697 CD209Q9NNX6 404 aa11.02□□□□□ -0.65
CDK5RAP3-229ENST00000583697 LAMB1P07942 1786 aa11.01□□□□□ -0.65
CDK5RAP3-229ENST00000583697 MYO1BO43795 1136 aa11.01□□□□□ -0.65
CDK5RAP3-229ENST00000583697 TAF5LO75529 589 aa11.01□□□□□ -0.65
CDK5RAP3-229ENST00000583697 TRPA1O75762 1119 aa11.01□□□□□ -0.65
CDK5RAP3-229ENST00000583697 LDHAL6AQ6ZMR3 332 aa11.01□□□□□ -0.65
CDK5RAP3-229ENST00000583697 SPINK5Q9NQ38 1064 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-229ENST00000583697 RNF186Q9NXI6 227 aa11.01□□□□□ -0.65
CDK5RAP3-229ENST00000583697 F8W031 263 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-229ENST00000583697 PLIN1O60240 522 aa11□□□□□ -0.65
CDK5RAP3-229ENST00000583697 ALDH1L1O75891 902 aa11□□□□□ -0.65
CDK5RAP3-229ENST00000583697 DLGAP5Q15398 846 aa11□□□□□ -0.65
CDK5RAP3-229ENST00000583697 PRAMEF18Q5VWM3 479 aa11□□□□□ -0.65
CDK5RAP3-229ENST00000583697 C15orf52Q6ZUT6 534 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-229ENST00000583697 MOB2Q70IA6 237 aa11□□□□□ -0.65
CDK5RAP3-229ENST00000583697 ARMC9Q7Z3E5 817 aa11□□□□□ -0.65
CDK5RAP3-229ENST00000583697 HELBQ8NG08 1087 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-229ENST00000583697 MYH13Q9UKX3 1938 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms