RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 USPL1Q5W0Q7 1092 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 TMC1Q8TDI8 760 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 HHIPQ96QV1 700 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 OSMRQ99650 979 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 NIF3L1Q9GZT8 377 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 LACRTQ9GZZ8 138 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 ADAM19Q9H013 955 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 DCTN4Q9UJW0 460 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 AMOTL2Q9Y2J4 779 aa6.78□□□□□ -1.32
VAPA-206ENST00000583475 PROCP04070 461 aa6.77□□□□□ -1.33
VAPA-206ENST00000583475 NEFLP07196 543 aa6.77□□□□□ -1.33
VAPA-206ENST00000583475 EDN3P14138 238 aa6.77□□□□□ -1.33
VAPA-206ENST00000583475 CDC27P30260 824 aa6.77□□□□□ -1.33
VAPA-206ENST00000583475 SETDB1Q15047 1291 aa6.77□□□□□ -1.33
VAPA-206ENST00000583475 NXPE3Q969Y0 559 aa6.77□□□□□ -1.33
VAPA-206ENST00000583475 SPOCK3Q9BQ16 436 aa6.77□□□□□ -1.33
VAPA-206ENST00000583475 ZKSCAN3Q9BRR0 538 aa6.77□□□□□ -1.33
VAPA-206ENST00000583475 SH2B1Q9NRF2 756 aaPredicted RBP6.77□□□□□ -1.33
VAPA-206ENST00000583475 LATS2Q9NRM7 1088 aa6.77□□□□□ -1.33
VAPA-206ENST00000583475 PPME1Q9Y570 386 aa6.77□□□□□ -1.33
VAPA-206ENST00000583475 PATL2C9JE40 543 aaKnown RBP6.76□□□□□ -1.33
VAPA-206ENST00000583475 PDE2AO00408 941 aaPredicted RBP6.76□□□□□ -1.33
VAPA-206ENST00000583475 MSTNO14793 375 aa6.76□□□□□ -1.33
VAPA-206ENST00000583475 APBA3O96018 575 aa6.76□□□□□ -1.33
VAPA-206ENST00000583475 SHISA2Q6UWI4 295 aa6.76□□□□□ -1.33
VAPA-206ENST00000583475 TMC7Q7Z402 723 aa6.76□□□□□ -1.33
VAPA-206ENST00000583475 AEBP1Q8IUX7 1158 aa6.76□□□□□ -1.33
VAPA-206ENST00000583475 GALNT12Q8IXK2 581 aa6.76□□□□□ -1.33
VAPA-206ENST00000583475 TMEM102Q8N9M5 508 aaPredicted RBP6.76□□□□□ -1.33
VAPA-206ENST00000583475 DMRTB1Q96MA1 342 aa6.76□□□□□ -1.33
VAPA-206ENST00000583475 MUC3BQ9H195 1237 aa6.76□□□□□ -1.33
VAPA-206ENST00000583475 LINC01387J3KSC0 135 aa6.75□□□□□ -1.33
VAPA-206ENST00000583475 DLL1O00548 723 aa6.75□□□□□ -1.33
VAPA-206ENST00000583475 TM4SF5O14894 197 aa6.75□□□□□ -1.33
VAPA-206ENST00000583475 CPNE3O75131 537 aaKnown RBP6.75□□□□□ -1.33
VAPA-206ENST00000583475 PTPRAP18433 802 aa6.75□□□□□ -1.33
VAPA-206ENST00000583475 ALKBH8Q96BT7 664 aaKnown RBP6.75□□□□□ -1.33
VAPA-206ENST00000583475 LENG1Q96BZ8 264 aaPredicted RBP6.75□□□□□ -1.33
VAPA-206ENST00000583475 A0A1W2PP55 124 aa6.74□□□□□ -1.33
VAPA-206ENST00000583475 C9orf172C9J069 976 aa6.74□□□□□ -1.33
VAPA-206ENST00000583475 EIF1AYO14602 144 aaKnown RBP6.74□□□□□ -1.33
VAPA-206ENST00000583475 EPHA1P21709 976 aa6.74□□□□□ -1.33
VAPA-206ENST00000583475 MAPK1P28482 360 aa6.74□□□□□ -1.33
VAPA-206ENST00000583475 DSC3Q14574 896 aa6.74□□□□□ -1.33
VAPA-206ENST00000583475 NACC1Q96RE7 527 aa6.74□□□□□ -1.33
VAPA-206ENST00000583475 DNAJC25Q9H1X3 360 aa6.74□□□□□ -1.33
VAPA-206ENST00000583475 CDC25BP30305 580 aa6.73□□□□□ -1.33
VAPA-206ENST00000583475 ADGRE1Q14246 886 aa6.73□□□□□ -1.33
VAPA-206ENST00000583475 SUZ12Q15022 739 aaKnown RBP6.73□□□□□ -1.33
VAPA-206ENST00000583475 TXNDC11Q6PKC3 985 aa6.73□□□□□ -1.33
VAPA-206ENST00000583475 IGF2-ASQ6U949 168 aa6.73□□□□□ -1.33
VAPA-206ENST00000583475 MAP4K3Q8IVH8 894 aa6.73□□□□□ -1.33
VAPA-206ENST00000583475 GALNT11Q8NCW6 608 aa6.73□□□□□ -1.33
VAPA-206ENST00000583475 CSRNP1Q96S65 589 aa6.73□□□□□ -1.33
VAPA-206ENST00000583475 BHLHE41Q9C0J9 482 aaPredicted RBP6.73□□□□□ -1.33
VAPA-206ENST00000583475 SRA1Q9HD15 236 aaKnown RBP6.73□□□□□ -1.33
VAPA-206ENST00000583475 SOX13Q9UN79 622 aa6.73□□□□□ -1.33
VAPA-206ENST00000583475 FSCN2O14926 492 aa6.72□□□□□ -1.33
VAPA-206ENST00000583475 TREHO43280 583 aa6.72□□□□□ -1.33
VAPA-206ENST00000583475 GATA4P43694 442 aa6.72□□□□□ -1.33
VAPA-206ENST00000583475 PLCB3Q01970 1234 aa6.72□□□□□ -1.33
VAPA-206ENST00000583475 KIAA0319Q5VV43 1072 aa6.72□□□□□ -1.33
VAPA-206ENST00000583475 BSNDQ8WZ55 320 aa6.72□□□□□ -1.33
VAPA-206ENST00000583475 CCDC74AQ96AQ1 378 aa6.72□□□□□ -1.33
VAPA-206ENST00000583475 TCF12Q99081 682 aa6.72□□□□□ -1.33
VAPA-206ENST00000583475 NRG1Q02297 640 aaPredicted RBP6.71□□□□□ -1.34
VAPA-206ENST00000583475 MBTPS1Q14703 1052 aa6.71□□□□□ -1.34
VAPA-206ENST00000583475 VN1R5Q7Z5H4 357 aa6.71□□□□□ -1.34
VAPA-206ENST00000583475 CCNJLQ8IV13 435 aa6.71□□□□□ -1.34
VAPA-206ENST00000583475 KLHDC7BQ96G42 594 aa6.71□□□□□ -1.34
VAPA-206ENST00000583475 ASB16Q96NS5 453 aa6.71□□□□□ -1.34
VAPA-206ENST00000583475 METTL12A8MUP2 240 aa6.7□□□□□ -1.34
VAPA-206ENST00000583475 H3BRJ5 948 aa6.7□□□□□ -1.34
VAPA-206ENST00000583475 SOX1O00570 391 aaPredicted RBP6.7□□□□□ -1.34
VAPA-206ENST00000583475 HGSNATQ68CP4 663 aa6.7□□□□□ -1.34
VAPA-206ENST00000583475 ASAP3Q8TDY4 903 aa6.7□□□□□ -1.34
VAPA-206ENST00000583475 CARD10Q9BWT7 1032 aa6.7□□□□□ -1.34
VAPA-206ENST00000583475 LIN7BQ9HAP6 207 aa6.7□□□□□ -1.34
VAPA-206ENST00000583475 NPHS2Q9NP85 383 aa6.7□□□□□ -1.34
VAPA-206ENST00000583475 KCNK4Q9NYG8 393 aa6.7□□□□□ -1.34
VAPA-206ENST00000583475 USP21Q9UK80 565 aa6.7□□□□□ -1.34
VAPA-206ENST00000583475 FAM177BA6PVY3 158 aa6.69□□□□□ -1.34
VAPA-206ENST00000583475 CD68P34810 354 aaPredicted RBP6.69□□□□□ -1.34
VAPA-206ENST00000583475 GRIA4P48058 902 aa6.69□□□□□ -1.34
VAPA-206ENST00000583475 CABP4P57796 275 aa6.69□□□□□ -1.34
VAPA-206ENST00000583475 SPRED3Q2MJR0 410 aa6.69□□□□□ -1.34
VAPA-206ENST00000583475 FOXD4L6Q3SYB3 417 aaPredicted RBP6.69□□□□□ -1.34
VAPA-206ENST00000583475 FAM117BQ6P1L5 589 aa6.69□□□□□ -1.34
VAPA-206ENST00000583475 FOXD4L3Q6VB84 417 aaPredicted RBP6.69□□□□□ -1.34
VAPA-206ENST00000583475 SND1Q7KZF4 910 aaKnown RBP eCLIP6.69□□□□□ -1.34
VAPA-206ENST00000583475 ZSCAN29Q8IWY8 852 aaPredicted RBP6.69□□□□□ -1.34
VAPA-206ENST00000583475 TMEM130Q8N3G9 435 aa6.69□□□□□ -1.34
VAPA-206ENST00000583475 KLHL23Q8NBE8 558 aa6.69□□□□□ -1.34
VAPA-206ENST00000583475 EPS8L3Q8TE67 593 aaKnown RBP6.69□□□□□ -1.34
VAPA-206ENST00000583475 WFDC12Q8WWY7 111 aa6.69□□□□□ -1.34
VAPA-206ENST00000583475 WNT8BQ93098 351 aa6.69□□□□□ -1.34
VAPA-206ENST00000583475 SEC31BQ9NQW1 1179 aa6.69□□□□□ -1.34
VAPA-206ENST00000583475 A0A096LPE4 126 aa6.68□□□□□ -1.34
VAPA-206ENST00000583475 A0A1W2PPZ6 126 aa6.68□□□□□ -1.34
VAPA-206ENST00000583475 DDX3YO15523 660 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms