RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 ANKIB1Q9P2G1 1089 aa16.77■□□□□ 0.28
ITGB4-209ENST00000583327 GGA1Q9UJY5 639 aa16.77■□□□□ 0.28
ITGB4-209ENST00000583327 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
ITGB4-209ENST00000583327 IFIT1P09914 478 aaKnown RBP16.76■□□□□ 0.27
ITGB4-209ENST00000583327 MX1P20591 662 aa16.76■□□□□ 0.27
ITGB4-209ENST00000583327 CCDC93Q567U6 631 aa16.76■□□□□ 0.27
ITGB4-209ENST00000583327 TXNRD3Q86VQ6 643 aa16.76■□□□□ 0.27
ITGB4-209ENST00000583327 FAM84BQ96KN1 310 aaPredicted RBP16.76■□□□□ 0.27
ITGB4-209ENST00000583327 NEUROD6Q96NK8 337 aa16.76■□□□□ 0.27
ITGB4-209ENST00000583327 PSMD1Q99460 953 aa16.76■□□□□ 0.27
ITGB4-209ENST00000583327 ECHDC1Q9NTX5 307 aa16.76■□□□□ 0.27
ITGB4-209ENST00000583327 AOX1Q06278 1338 aa16.75■□□□□ 0.27
ITGB4-209ENST00000583327 ATP5JP18859 108 aa16.75■□□□□ 0.27
ITGB4-209ENST00000583327 KLRK1P26718 216 aa16.75■□□□□ 0.27
ITGB4-209ENST00000583327 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
ITGB4-209ENST00000583327 PI4K2BQ8TCG2 481 aa16.75■□□□□ 0.27
ITGB4-209ENST00000583327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.75■□□□□ 0.27
ITGB4-209ENST00000583327 TMX4Q9H1E5 349 aaPredicted RBP16.75■□□□□ 0.27
ITGB4-209ENST00000583327 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
ITGB4-209ENST00000583327 ARAP2Q8WZ64 1704 aa16.75■□□□□ 0.27
ITGB4-209ENST00000583327 MED23Q9ULK4 1368 aa16.75■□□□□ 0.27
ITGB4-209ENST00000583327 CACNA1SQ13698 1873 aa16.74■□□□□ 0.27
ITGB4-209ENST00000583327 UFL1O94874 794 aa16.74■□□□□ 0.27
ITGB4-209ENST00000583327 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
ITGB4-209ENST00000583327 BCS1LQ9Y276 419 aa16.74■□□□□ 0.27
ITGB4-209ENST00000583327 ARID4AP29374 1257 aaPredicted RBP16.73■□□□□ 0.27
ITGB4-209ENST00000583327 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
ITGB4-209ENST00000583327 LTBP3Q9NS15 1303 aa16.72■□□□□ 0.27
ITGB4-209ENST00000583327 C6orf229H3BNL8 230 aa16.72■□□□□ 0.27
ITGB4-209ENST00000583327 PHKA1P46020 1223 aa16.72■□□□□ 0.27
ITGB4-209ENST00000583327 GYG1P46976 350 aa16.72■□□□□ 0.27
ITGB4-209ENST00000583327 KCNJ4P48050 445 aa16.72■□□□□ 0.27
ITGB4-209ENST00000583327 BCAMP50895 628 aa16.72■□□□□ 0.27
ITGB4-209ENST00000583327 FKBP4Q02790 459 aaKnown RBP eCLIP16.72■□□□□ 0.27
ITGB4-209ENST00000583327 SUPT20HQ8NEM7 779 aa16.72■□□□□ 0.27
ITGB4-209ENST00000583327 ARFGEF1Q9Y6D6 1849 aa16.72■□□□□ 0.27
ITGB4-209ENST00000583327 NFKBIEO00221 500 aa16.71■□□□□ 0.27
ITGB4-209ENST00000583327 GLRX3O76003 335 aaKnown RBP16.71■□□□□ 0.27
ITGB4-209ENST00000583327 IL1R1P14778 569 aa16.71■□□□□ 0.27
ITGB4-209ENST00000583327 HIBADHP31937 336 aaKnown RBP16.71■□□□□ 0.27
ITGB4-209ENST00000583327 KIAA2012Q0VF49 1180 aa16.71■□□□□ 0.27
ITGB4-209ENST00000583327 CAVIN4Q5BKX8 364 aa16.71■□□□□ 0.27
ITGB4-209ENST00000583327 CCDC158Q5M9N0 1113 aa16.71■□□□□ 0.27
ITGB4-209ENST00000583327 TDRD7Q8NHU6 1098 aaKnown RBP16.71■□□□□ 0.27
ITGB4-209ENST00000583327 GPR101Q96P66 508 aaPredicted RBP16.71■□□□□ 0.27
ITGB4-209ENST00000583327 EYA3Q99504 573 aa16.71■□□□□ 0.27
ITGB4-209ENST00000583327 FER1L6Q2WGJ9 1857 aa16.7■□□□□ 0.26
ITGB4-209ENST00000583327 UQCRFS1P1P0C7P4 283 aa16.7■□□□□ 0.26
ITGB4-209ENST00000583327 RGS3P49796 1198 aa16.7■□□□□ 0.26
ITGB4-209ENST00000583327 SCARF1Q14162 830 aa16.7■□□□□ 0.26
ITGB4-209ENST00000583327 WASHC4Q2M389 1173 aa16.7■□□□□ 0.26
ITGB4-209ENST00000583327 TTC22Q5TAA0 569 aa16.7■□□□□ 0.26
ITGB4-209ENST00000583327 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
ITGB4-209ENST00000583327 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
ITGB4-209ENST00000583327 HAUS7Q99871 368 aa16.7■□□□□ 0.26
ITGB4-209ENST00000583327 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
ITGB4-209ENST00000583327 CD209Q9NNX6 404 aa16.7■□□□□ 0.26
ITGB4-209ENST00000583327 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
ITGB4-209ENST00000583327 SEMA3EO15041 775 aa16.69■□□□□ 0.26
ITGB4-209ENST00000583327 ERC2O15083 957 aa16.69■□□□□ 0.26
ITGB4-209ENST00000583327 GSPT1P15170 499 aaKnown RBP16.69■□□□□ 0.26
ITGB4-209ENST00000583327 GORABQ5T7V8 394 aa16.69■□□□□ 0.26
ITGB4-209ENST00000583327 COA1Q9GZY4 146 aa16.69■□□□□ 0.26
ITGB4-209ENST00000583327 WWC3Q9ULE0 1092 aa16.69■□□□□ 0.26
ITGB4-209ENST00000583327 YBX3P16989 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
ITGB4-209ENST00000583327 MCAMP43121 646 aa16.68■□□□□ 0.26
ITGB4-209ENST00000583327 BMP2KLQ5H9B9 411 aa16.68■□□□□ 0.26
ITGB4-209ENST00000583327 TTC39AQ5SRH9 613 aa16.68■□□□□ 0.26
ITGB4-209ENST00000583327 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
ITGB4-209ENST00000583327 HMG20BQ9P0W2 317 aa16.68■□□□□ 0.26
ITGB4-209ENST00000583327 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
ITGB4-209ENST00000583327 RIMBP2O15034 1052 aa16.67■□□□□ 0.26
ITGB4-209ENST00000583327 PRELPP51888 382 aa16.67■□□□□ 0.26
ITGB4-209ENST00000583327 RASGRF1Q13972 1273 aa16.67■□□□□ 0.26
ITGB4-209ENST00000583327 ZNF804AQ7Z570 1209 aa16.67■□□□□ 0.26
ITGB4-209ENST00000583327 PODNQ7Z5L7 613 aa16.67■□□□□ 0.26
ITGB4-209ENST00000583327 BOLA2Q9H3K6 86 aa16.67■□□□□ 0.26
ITGB4-209ENST00000583327 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
ITGB4-209ENST00000583327 TAOK3Q9H2K8 898 aa16.66■□□□□ 0.26
ITGB4-209ENST00000583327 DENND2AQ9ULE3 1009 aa16.66■□□□□ 0.26
ITGB4-209ENST00000583327 AKAP11Q9UKA4 1901 aa16.65■□□□□ 0.26
ITGB4-209ENST00000583327 IARSP41252 1262 aaKnown RBP16.65■□□□□ 0.26
ITGB4-209ENST00000583327 AOC3Q16853 763 aa16.65■□□□□ 0.26
ITGB4-209ENST00000583327 TICAM2Q86XR7 235 aa16.65■□□□□ 0.26
ITGB4-209ENST00000583327 VPS37DQ86XT2 251 aa16.65■□□□□ 0.26
ITGB4-209ENST00000583327 SPATA5Q8NB90 893 aa16.65■□□□□ 0.26
ITGB4-209ENST00000583327 ZNF277Q9NRM2 450 aaPredicted RBP16.65■□□□□ 0.26
ITGB4-209ENST00000583327 COL1A1P02452 1464 aaPredicted RBP16.65■□□□□ 0.26
ITGB4-209ENST00000583327 FAM205AQ6ZU69 1335 aa16.65■□□□□ 0.26
ITGB4-209ENST00000583327 CYP2E1P05181 493 aaPredicted RBP16.64■□□□□ 0.25
ITGB4-209ENST00000583327 SDSP20132 328 aa16.64■□□□□ 0.25
ITGB4-209ENST00000583327 ZAP70P43403 619 aa16.64■□□□□ 0.25
ITGB4-209ENST00000583327 PI16Q6UXB8 463 aa16.64■□□□□ 0.25
ITGB4-209ENST00000583327 COL4A5P29400 1685 aa16.64■□□□□ 0.25
ITGB4-209ENST00000583327 GOLGB1Q14789 3259 aaKnown RBP16.64■□□□□ 0.25
ITGB4-209ENST00000583327 YDJCA8MPS7 323 aa16.63■□□□□ 0.25
ITGB4-209ENST00000583327 PPIP5K2O43314 1243 aa16.63■□□□□ 0.25
ITGB4-209ENST00000583327 IGSF3O75054 1194 aa16.63■□□□□ 0.25
ITGB4-209ENST00000583327 DOK7Q18PE1 504 aa16.63■□□□□ 0.25
ITGB4-209ENST00000583327 EVI5LQ96CN4 794 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms