RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 ZNF804BA4D1E1 1349 aa17.79■□□□□ 0.44
SENP3-208ENST00000583277 SP8Q8IXZ3 490 aa17.79■□□□□ 0.44
SENP3-208ENST00000583277 ZNF622Q969S3 477 aaKnown RBP eCLIP17.79■□□□□ 0.44
SENP3-208ENST00000583277 DNAJC2Q99543 621 aaKnown RBP17.79■□□□□ 0.44
SENP3-208ENST00000583277 UPF2Q9HAU5 1272 aaKnown RBP17.79■□□□□ 0.44
SENP3-208ENST00000583277 HIP1O00291 1037 aa17.78■□□□□ 0.44
SENP3-208ENST00000583277 CAVIN4Q5BKX8 364 aa17.78■□□□□ 0.44
SENP3-208ENST00000583277 GNL3LQ9NVN8 582 aaKnown RBP17.78■□□□□ 0.44
SENP3-208ENST00000583277 PAG1Q9NWQ8 432 aa17.78■□□□□ 0.44
SENP3-208ENST00000583277 PODXL2Q9NZ53 605 aa17.78■□□□□ 0.44
SENP3-208ENST00000583277 ATF5Q9Y2D1 282 aaPredicted RBP17.78■□□□□ 0.44
SENP3-208ENST00000583277 MYH7P12883 1935 aa17.77■□□□□ 0.44
SENP3-208ENST00000583277 PSDA5PKW4 1024 aaPredicted RBP17.77■□□□□ 0.44
SENP3-208ENST00000583277 SNAP23O00161 211 aa17.77■□□□□ 0.44
SENP3-208ENST00000583277 ATP2B4P23634 1241 aa17.77■□□□□ 0.44
SENP3-208ENST00000583277 PHKA1P46020 1223 aa17.77■□□□□ 0.44
SENP3-208ENST00000583277 FSD1Q9BTV5 496 aa17.77■□□□□ 0.44
SENP3-208ENST00000583277 SLX4Q8IY92 1834 aa17.76■□□□□ 0.43
SENP3-208ENST00000583277 CHMLP26374 656 aa17.76■□□□□ 0.43
SENP3-208ENST00000583277 VPS37DQ86XT2 251 aa17.76■□□□□ 0.43
SENP3-208ENST00000583277 GGA1Q9UJY5 639 aa17.76■□□□□ 0.43
SENP3-208ENST00000583277 KIAA1551Q9HCM1 1747 aa17.76■□□□□ 0.43
SENP3-208ENST00000583277 CHRNA5P30532 468 aa17.75■□□□□ 0.43
SENP3-208ENST00000583277 GPSM2P81274 684 aa17.75■□□□□ 0.43
SENP3-208ENST00000583277 PRPF40BQ6NWY9 871 aaKnown RBP17.75■□□□□ 0.43
SENP3-208ENST00000583277 C15orf52Q6ZUT6 534 aaKnown RBP17.75■□□□□ 0.43
SENP3-208ENST00000583277 KBTBD3Q8NAB2 608 aa17.75■□□□□ 0.43
SENP3-208ENST00000583277 DIAPH3Q9NSV4 1193 aa17.75■□□□□ 0.43
SENP3-208ENST00000583277 NSFL1CQ9UNZ2 370 aaKnown RBP17.75■□□□□ 0.43
SENP3-208ENST00000583277 GOLIM4O00461 696 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 SEMA3EO15041 775 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 ZBTB22O15209 634 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 UFL1O94874 794 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 MCAMP43121 646 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 FKBP4Q02790 459 aaKnown RBP eCLIP17.74■□□□□ 0.43
SENP3-208ENST00000583277 TTF1Q15361 905 aaPredicted RBP17.74■□□□□ 0.43
SENP3-208ENST00000583277 LRRFIP1Q32MZ4 808 aaKnown RBP17.74■□□□□ 0.43
SENP3-208ENST00000583277 DOCK2Q92608 1830 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 BCAMP50895 628 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 TGFB2P61812 414 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 SCARF1Q14162 830 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 FBXO33Q7Z6M2 555 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 RUFY2Q8WXA3 655 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 SGIP1Q9BQI5 828 aa17.74■□□□□ 0.43
SENP3-208ENST00000583277 MED23Q9ULK4 1368 aa17.73■□□□□ 0.43
SENP3-208ENST00000583277 PDS5AQ29RF7 1337 aaKnown RBP17.73■□□□□ 0.43
SENP3-208ENST00000583277 IRS2Q9Y4H2 1338 aa17.73■□□□□ 0.43
SENP3-208ENST00000583277 REC8O95072 547 aa17.73■□□□□ 0.43
SENP3-208ENST00000583277 GYG1P46976 350 aa17.73■□□□□ 0.43
SENP3-208ENST00000583277 MFAP1P55081 439 aaKnown RBP17.73■□□□□ 0.43
SENP3-208ENST00000583277 RASGRF1Q13972 1273 aa17.73■□□□□ 0.43
SENP3-208ENST00000583277 CC2D2BQ6DHV5 1058 aa17.73■□□□□ 0.43
SENP3-208ENST00000583277 SPATA5Q8NB90 893 aa17.73■□□□□ 0.43
SENP3-208ENST00000583277 EDC3Q96F86 508 aaKnown RBP17.73■□□□□ 0.43
SENP3-208ENST00000583277 ESYT1Q9BSJ8 1104 aa17.73■□□□□ 0.43
SENP3-208ENST00000583277 BRCA1P38398 1863 aaKnown RBP17.73■□□□□ 0.43
SENP3-208ENST00000583277 RAD50Q92878 1312 aa17.72■□□□□ 0.43
SENP3-208ENST00000583277 SEC24BO95487 1268 aa17.72■□□□□ 0.43
SENP3-208ENST00000583277 HIBADHP31937 336 aaKnown RBP17.72■□□□□ 0.43
SENP3-208ENST00000583277 ZAP70P43403 619 aa17.72■□□□□ 0.43
SENP3-208ENST00000583277 MPNDQ8N594 471 aa17.72■□□□□ 0.43
SENP3-208ENST00000583277 FAM84BQ96KN1 310 aaPredicted RBP17.72■□□□□ 0.43
SENP3-208ENST00000583277 SNRKQ9NRH2 765 aa17.72■□□□□ 0.43
SENP3-208ENST00000583277 NDUFB9Q9Y6M9 179 aa17.72■□□□□ 0.43
SENP3-208ENST00000583277 DUOX1Q9NRD9 1551 aa17.72■□□□□ 0.43
SENP3-208ENST00000583277 KLRK1P26718 216 aa17.71■□□□□ 0.43
SENP3-208ENST00000583277 GRIPAP1Q4V328 841 aa17.71■□□□□ 0.43
SENP3-208ENST00000583277 ZNF804AQ7Z570 1209 aa17.71■□□□□ 0.43
SENP3-208ENST00000583277 TTLL6Q8N841 843 aa17.71■□□□□ 0.43
SENP3-208ENST00000583277 TBC1D16Q8TBP0 767 aa17.71■□□□□ 0.43
SENP3-208ENST00000583277 HMG20BQ9P0W2 317 aa17.71■□□□□ 0.43
SENP3-208ENST00000583277 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
SENP3-208ENST00000583277 CD2APQ9Y5K6 639 aa17.71■□□□□ 0.43
SENP3-208ENST00000583277 WTIPA6NIX2 430 aaPredicted RBP17.7■□□□□ 0.42
SENP3-208ENST00000583277 ZFYP08048 801 aaPredicted RBP17.7■□□□□ 0.42
SENP3-208ENST00000583277 DPEP1P16444 411 aa17.7■□□□□ 0.42
SENP3-208ENST00000583277 PTGER2P43116 358 aa17.7■□□□□ 0.42
SENP3-208ENST00000583277 DPP8Q6V1X1 898 aaPredicted RBP17.7■□□□□ 0.42
SENP3-208ENST00000583277 SLC51AQ86UW1 340 aa17.7■□□□□ 0.42
SENP3-208ENST00000583277 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.42
SENP3-208ENST00000583277 MYO5AQ9Y4I1 1855 aaKnown RBP17.7■□□□□ 0.42
SENP3-208ENST00000583277 PI16Q6UXB8 463 aa17.7■□□□□ 0.42
SENP3-208ENST00000583277 POLLQ9UGP5 575 aa17.7■□□□□ 0.42
SENP3-208ENST00000583277 C6orf229H3BNL8 230 aa17.69■□□□□ 0.42
SENP3-208ENST00000583277 SGSM2O43147 1006 aa17.69■□□□□ 0.42
SENP3-208ENST00000583277 CYP2E1P05181 493 aaPredicted RBP17.69■□□□□ 0.42
SENP3-208ENST00000583277 ZSCAN25Q6NSZ9 544 aa17.69■□□□□ 0.42
SENP3-208ENST00000583277 CWC27Q6UX04 472 aaKnown RBP17.69■□□□□ 0.42
SENP3-208ENST00000583277 ANTXR1Q9H6X2 564 aa17.69■□□□□ 0.42
SENP3-208ENST00000583277 SPON1Q9HCB6 807 aa17.69■□□□□ 0.42
SENP3-208ENST00000583277 RBM19Q9Y4C8 960 aaKnown RBP17.69■□□□□ 0.42
SENP3-208ENST00000583277 COL1A1P02452 1464 aaPredicted RBP17.68■□□□□ 0.42
SENP3-208ENST00000583277 A0A0G2JLW4 131 aa17.68■□□□□ 0.42
SENP3-208ENST00000583277 EPB41L2O43491 1005 aaKnown RBP17.68■□□□□ 0.42
SENP3-208ENST00000583277 FRAT2O75474 233 aaPredicted RBP17.68■□□□□ 0.42
SENP3-208ENST00000583277 C7orf43Q8WVR3 580 aa17.68■□□□□ 0.42
SENP3-208ENST00000583277 EYA3Q99504 573 aa17.68■□□□□ 0.42
SENP3-208ENST00000583277 KCNA3P22001 575 aa17.67■□□□□ 0.42
SENP3-208ENST00000583277 NMIQ13287 307 aaPredicted RBP17.67■□□□□ 0.42
SENP3-208ENST00000583277 WASHC4Q2M389 1173 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms