RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CDC25BP30305 580 aa7.99□□□□□ -1.13
COPS3-217ENST00000583160 PDE4CQ08493 712 aa7.99□□□□□ -1.13
COPS3-217ENST00000583160 KRTAP4-6Q9BYQ5 205 aa7.99□□□□□ -1.13
COPS3-217ENST00000583160 H3BRB1 525 aa7.98□□□□□ -1.13
COPS3-217ENST00000583160 NFKBIEO00221 500 aa7.98□□□□□ -1.13
COPS3-217ENST00000583160 PHACTR2O75167 634 aa7.98□□□□□ -1.13
COPS3-217ENST00000583160 TRPA1O75762 1119 aa7.98□□□□□ -1.13
COPS3-217ENST00000583160 PTPRAP18433 802 aa7.98□□□□□ -1.13
COPS3-217ENST00000583160 NOS3P29474 1203 aa7.98□□□□□ -1.13
COPS3-217ENST00000583160 TXNDC11Q6PKC3 985 aa7.98□□□□□ -1.13
COPS3-217ENST00000583160 GLYCTKQ8IVS8 523 aa7.98□□□□□ -1.13
COPS3-217ENST00000583160 DCAF11Q8TEB1 546 aa7.98□□□□□ -1.13
COPS3-217ENST00000583160 TUT1Q9H6E5 874 aaKnown RBP7.98□□□□□ -1.13
COPS3-217ENST00000583160 SH2B1Q9NRF2 756 aaPredicted RBP7.98□□□□□ -1.13
COPS3-217ENST00000583160 DZANK1Q9NVP4 752 aa7.98□□□□□ -1.13
COPS3-217ENST00000583160 FOXD3Q9UJU5 478 aaPredicted RBP7.98□□□□□ -1.13
COPS3-217ENST00000583160 EREGO14944 169 aa7.97□□□□□ -1.13
COPS3-217ENST00000583160 DYRK3O43781 588 aa7.97□□□□□ -1.13
COPS3-217ENST00000583160 ITGB7P26010 798 aa7.97□□□□□ -1.13
COPS3-217ENST00000583160 ECM1Q16610 540 aa7.97□□□□□ -1.13
COPS3-217ENST00000583160 GJD3Q8N144 294 aa7.97□□□□□ -1.13
COPS3-217ENST00000583160 GALNT11Q8NCW6 608 aa7.97□□□□□ -1.13
COPS3-217ENST00000583160 SNX29Q8TEQ0 813 aa7.97□□□□□ -1.13
COPS3-217ENST00000583160 TP53INP1Q96A56 240 aa7.97□□□□□ -1.13
COPS3-217ENST00000583160 SSBP4Q9BWG4 385 aaPredicted RBP7.97□□□□□ -1.13
COPS3-217ENST00000583160 ADAM19Q9H013 955 aa7.97□□□□□ -1.13
COPS3-217ENST00000583160 MRPL18Q9H0U6 180 aaKnown RBP7.97□□□□□ -1.13
COPS3-217ENST00000583160 FAM177BA6PVY3 158 aa7.96□□□□□ -1.14
COPS3-217ENST00000583160 ALX3O95076 343 aa7.96□□□□□ -1.14
COPS3-217ENST00000583160 EPHA1P21709 976 aa7.96□□□□□ -1.14
COPS3-217ENST00000583160 TXNDC2Q86VQ3 553 aa7.96□□□□□ -1.14
COPS3-217ENST00000583160 TMEM130Q8N3G9 435 aa7.96□□□□□ -1.14
COPS3-217ENST00000583160 PDE2AO00408 941 aaPredicted RBP7.95□□□□□ -1.14
COPS3-217ENST00000583160 H2AFB1P0C5Y9 115 aa7.95□□□□□ -1.14
COPS3-217ENST00000583160 H2AFB2P0C5Z0 115 aa7.95□□□□□ -1.14
COPS3-217ENST00000583160 FAM117BQ6P1L5 589 aa7.95□□□□□ -1.14
COPS3-217ENST00000583160 MEGF10Q96KG7 1140 aa7.95□□□□□ -1.14
COPS3-217ENST00000583160 HHIPQ96QV1 700 aa7.95□□□□□ -1.14
COPS3-217ENST00000583160 CARD10Q9BWT7 1032 aa7.95□□□□□ -1.14
COPS3-217ENST00000583160 AKTIPQ9H8T0 292 aa7.95□□□□□ -1.14
COPS3-217ENST00000583160 BRPF3Q9ULD4 1205 aa7.95□□□□□ -1.14
COPS3-217ENST00000583160 F8W735 103 aaPredicted RBP7.94□□□□□ -1.14
COPS3-217ENST00000583160 FSCN2O14926 492 aa7.94□□□□□ -1.14
COPS3-217ENST00000583160 EDN3P14138 238 aa7.94□□□□□ -1.14
COPS3-217ENST00000583160 CD68P34810 354 aaPredicted RBP7.94□□□□□ -1.14
COPS3-217ENST00000583160 OSMRQ99650 979 aa7.94□□□□□ -1.14
COPS3-217ENST00000583160 ZFYVE28Q9HCC9 887 aa7.94□□□□□ -1.14
COPS3-217ENST00000583160 CABP4P57796 275 aa7.93□□□□□ -1.14
COPS3-217ENST00000583160 ARHGAP4P98171 946 aa7.93□□□□□ -1.14
COPS3-217ENST00000583160 FOXD4L6Q3SYB3 417 aaPredicted RBP7.93□□□□□ -1.14
COPS3-217ENST00000583160 FOXD4L3Q6VB84 417 aaPredicted RBP7.93□□□□□ -1.14
COPS3-217ENST00000583160 TMEM102Q8N9M5 508 aaPredicted RBP7.93□□□□□ -1.14
COPS3-217ENST00000583160 KLHL23Q8NBE8 558 aa7.93□□□□□ -1.14
COPS3-217ENST00000583160 ZKSCAN3Q9BRR0 538 aa7.93□□□□□ -1.14
COPS3-217ENST00000583160 KCNK4Q9NYG8 393 aa7.93□□□□□ -1.14
COPS3-217ENST00000583160 AMOTL2Q9Y2J4 779 aa7.93□□□□□ -1.14
COPS3-217ENST00000583160 H3BRJ5 948 aa7.92□□□□□ -1.14
COPS3-217ENST00000583160 TM4SF5O14894 197 aa7.92□□□□□ -1.14
COPS3-217ENST00000583160 AGGF1Q8N302 714 aaeCLIP7.92□□□□□ -1.14
COPS3-217ENST00000583160 CCER1Q8TC90 406 aaPredicted RBP7.92□□□□□ -1.14
COPS3-217ENST00000583160 NXPE3Q969Y0 559 aa7.92□□□□□ -1.14
COPS3-217ENST00000583160 KLHDC7BQ96G42 594 aa7.92□□□□□ -1.14
COPS3-217ENST00000583160 SEC31BQ9NQW1 1179 aa7.92□□□□□ -1.14
COPS3-217ENST00000583160 DDX3YO15523 660 aaKnown RBP7.91□□□□□ -1.14
COPS3-217ENST00000583160 NDUFB5O43674 189 aa7.91□□□□□ -1.14
COPS3-217ENST00000583160 POLR3DP05423 398 aaPredicted RBP7.91□□□□□ -1.14
COPS3-217ENST00000583160 PRSS36Q5K4E3 855 aa7.91□□□□□ -1.14
COPS3-217ENST00000583160 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.91□□□□□ -1.14
COPS3-217ENST00000583160 DZIP1LQ8IYY4 767 aaKnown RBP7.91□□□□□ -1.14
COPS3-217ENST00000583160 LATS2Q9NRM7 1088 aa7.91□□□□□ -1.14
COPS3-217ENST00000583160 WISP1O95388 367 aa7.9□□□□□ -1.14
COPS3-217ENST00000583160 PIP4K2BP78356 416 aa7.9□□□□□ -1.14
COPS3-217ENST00000583160 PEAR1Q5VY43 1037 aaPredicted RBP7.9□□□□□ -1.14
COPS3-217ENST00000583160 BSNDQ8WZ55 320 aa7.9□□□□□ -1.14
COPS3-217ENST00000583160 WNT8BQ93098 351 aa7.9□□□□□ -1.14
COPS3-217ENST00000583160 OSGEPQ9NPF4 335 aa7.9□□□□□ -1.14
COPS3-217ENST00000583160 SOX13Q9UN79 622 aa7.9□□□□□ -1.14
COPS3-217ENST00000583160 GLB1P16278 677 aa7.89□□□□□ -1.15
COPS3-217ENST00000583160 PDE3BQ13370 1112 aa7.89□□□□□ -1.15
COPS3-217ENST00000583160 DUOXA2Q1HG44 320 aa7.89□□□□□ -1.15
COPS3-217ENST00000583160 ACAD11Q709F0 780 aa7.89□□□□□ -1.15
COPS3-217ENST00000583160 SLC7A3Q8WY07 619 aa7.89□□□□□ -1.15
COPS3-217ENST00000583160 ADAM11O75078 769 aa7.88□□□□□ -1.15
COPS3-217ENST00000583160 NEFLP07196 543 aa7.88□□□□□ -1.15
COPS3-217ENST00000583160 ZMYM1Q5SVZ6 1142 aa7.88□□□□□ -1.15
COPS3-217ENST00000583160 Q6ZS46 218 aa7.88□□□□□ -1.15
COPS3-217ENST00000583160 ASAP3Q8TDY4 903 aa7.88□□□□□ -1.15
COPS3-217ENST00000583160 CITED4Q96RK1 184 aa7.88□□□□□ -1.15
COPS3-217ENST00000583160 BHLHE41Q9C0J9 482 aaPredicted RBP7.88□□□□□ -1.15
COPS3-217ENST00000583160 SOX1O00570 391 aaPredicted RBP7.87□□□□□ -1.15
COPS3-217ENST00000583160 ARL4DP49703 201 aa7.87□□□□□ -1.15
COPS3-217ENST00000583160 USPL1Q5W0Q7 1092 aa7.87□□□□□ -1.15
COPS3-217ENST00000583160 HGSNATQ68CP4 663 aa7.87□□□□□ -1.15
COPS3-217ENST00000583160 KIAA1211Q6ZU35 1233 aa7.87□□□□□ -1.15
COPS3-217ENST00000583160 VN1R5Q7Z5H4 357 aa7.87□□□□□ -1.15
COPS3-217ENST00000583160 GALNT12Q8IXK2 581 aa7.87□□□□□ -1.15
COPS3-217ENST00000583160 UBASH3BQ8TF42 649 aa7.87□□□□□ -1.15
COPS3-217ENST00000583160 FOXD4L4Q8WXT5 416 aaPredicted RBP7.87□□□□□ -1.15
COPS3-217ENST00000583160 FAM129BQ96TA1 746 aa7.87□□□□□ -1.15
COPS3-217ENST00000583160 BRD1O95696 1058 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms