RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 USP17L1Q7RTZ2 530 aa17.51■□□□□ 0.39
GGA3-215ENST00000582821 AGBL3Q8NEM8 1001 aa17.51■□□□□ 0.39
GGA3-215ENST00000582821 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
GGA3-215ENST00000582821 PUS3Q9BZE2 481 aaKnown RBP17.51■□□□□ 0.39
GGA3-215ENST00000582821 MROH5Q6ZUA9 1318 aa17.5■□□□□ 0.39
GGA3-215ENST00000582821 GNAI3P08754 354 aa17.5■□□□□ 0.39
GGA3-215ENST00000582821 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
GGA3-215ENST00000582821 UBE4AQ14139 1066 aa17.5■□□□□ 0.39
GGA3-215ENST00000582821 RSBN1LQ6PCB5 846 aaPredicted RBP17.5■□□□□ 0.39
GGA3-215ENST00000582821 MICALL2Q8IY33 904 aa17.5■□□□□ 0.39
GGA3-215ENST00000582821 CNTROBQ8N137 903 aa17.5■□□□□ 0.39
GGA3-215ENST00000582821 DNAJC5GQ8N7S2 189 aa17.5■□□□□ 0.39
GGA3-215ENST00000582821 ZC3H15Q8WU90 426 aaKnown RBP17.5■□□□□ 0.39
GGA3-215ENST00000582821 GMLQ99445 158 aa17.5■□□□□ 0.39
GGA3-215ENST00000582821 SNAP23O00161 211 aa17.49■□□□□ 0.39
GGA3-215ENST00000582821 KLRK1P26718 216 aa17.49■□□□□ 0.39
GGA3-215ENST00000582821 HIRAP54198 1017 aaPredicted RBP17.49■□□□□ 0.39
GGA3-215ENST00000582821 STRIP1Q5VSL9 837 aa17.49■□□□□ 0.39
GGA3-215ENST00000582821 MEIS3Q99687 375 aa17.49■□□□□ 0.39
GGA3-215ENST00000582821 CD209Q9NNX6 404 aa17.49■□□□□ 0.39
GGA3-215ENST00000582821 FBXO3Q9UK99 471 aa17.49■□□□□ 0.39
GGA3-215ENST00000582821 PTPN12Q05209 780 aaKnown RBP17.48■□□□□ 0.39
GGA3-215ENST00000582821 MAP1SQ66K74 1059 aaPredicted RBP17.48■□□□□ 0.39
GGA3-215ENST00000582821 TNNQ9UQP3 1299 aa17.48■□□□□ 0.39
GGA3-215ENST00000582821 LRRFIP2Q9Y608 721 aaKnown RBP17.48■□□□□ 0.39
GGA3-215ENST00000582821 SHTN1A0MZ66 631 aa17.47■□□□□ 0.39
GGA3-215ENST00000582821 PLIN1O60240 522 aa17.47■□□□□ 0.39
GGA3-215ENST00000582821 IL1R1P14778 569 aa17.47■□□□□ 0.39
GGA3-215ENST00000582821 MMP14P50281 582 aa17.47■□□□□ 0.39
GGA3-215ENST00000582821 ZNF280AP59817 542 aaPredicted RBP17.47■□□□□ 0.39
GGA3-215ENST00000582821 LRRC24Q50LG9 513 aa17.47■□□□□ 0.39
GGA3-215ENST00000582821 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
GGA3-215ENST00000582821 CLUAP1Q96AJ1 413 aa17.47■□□□□ 0.39
GGA3-215ENST00000582821 POLR2AP24928 1970 aaKnown RBP17.47■□□□□ 0.39
GGA3-215ENST00000582821 EYA2O00167 538 aa17.46■□□□□ 0.39
GGA3-215ENST00000582821 TTLL5Q6EMB2 1281 aa17.46■□□□□ 0.39
GGA3-215ENST00000582821 VGLL2Q8N8G2 317 aa17.46■□□□□ 0.39
GGA3-215ENST00000582821 TRPM4Q8TD43 1214 aa17.46■□□□□ 0.39
GGA3-215ENST00000582821 ZNF646O15015 1829 aaPredicted RBP17.46■□□□□ 0.39
GGA3-215ENST00000582821 MYO3BQ8WXR4 1341 aa17.46■□□□□ 0.38
GGA3-215ENST00000582821 PDE8BO95263 885 aa17.45■□□□□ 0.38
GGA3-215ENST00000582821 MTX1Q13505 466 aa17.45■□□□□ 0.38
GGA3-215ENST00000582821 SAMD7Q7Z3H4 446 aa17.45■□□□□ 0.38
GGA3-215ENST00000582821 ZNF804AQ7Z570 1209 aa17.45■□□□□ 0.38
GGA3-215ENST00000582821 TMEM57Q8N5G2 664 aa17.45■□□□□ 0.38
GGA3-215ENST00000582821 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
GGA3-215ENST00000582821 CREBZFQ9NS37 354 aa17.45■□□□□ 0.38
GGA3-215ENST00000582821 CIAO1O76071 339 aa17.44■□□□□ 0.38
GGA3-215ENST00000582821 USP17L8P0C7I0 530 aa17.44■□□□□ 0.38
GGA3-215ENST00000582821 HTRA3P83110 453 aa17.44■□□□□ 0.38
GGA3-215ENST00000582821 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
GGA3-215ENST00000582821 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
GGA3-215ENST00000582821 COPRSQ9NQ92 184 aa17.44■□□□□ 0.38
GGA3-215ENST00000582821 GNAI2P04899 355 aa17.43■□□□□ 0.38
GGA3-215ENST00000582821 GTF2IP78347 998 aa17.43■□□□□ 0.38
GGA3-215ENST00000582821 ATG9AQ7Z3C6 839 aa17.43■□□□□ 0.38
GGA3-215ENST00000582821 FBXO33Q7Z6M2 555 aa17.43■□□□□ 0.38
GGA3-215ENST00000582821 TDRD7Q8NHU6 1098 aaKnown RBP17.43■□□□□ 0.38
GGA3-215ENST00000582821 FAM84BQ96KN1 310 aaPredicted RBP17.43■□□□□ 0.38
GGA3-215ENST00000582821 TRPM7Q96QT4 1865 aa17.42■□□□□ 0.38
GGA3-215ENST00000582821 TMEM88BA6NKF7 163 aa17.42■□□□□ 0.38
GGA3-215ENST00000582821 SASH1O94885 1247 aa17.42■□□□□ 0.38
GGA3-215ENST00000582821 EGFRP00533 1210 aa17.42■□□□□ 0.38
GGA3-215ENST00000582821 FGFR2P21802 821 aa17.42■□□□□ 0.38
GGA3-215ENST00000582821 HIBADHP31937 336 aaKnown RBP17.42■□□□□ 0.38
GGA3-215ENST00000582821 FKBP1AP62942 108 aaKnown RBP17.42■□□□□ 0.38
GGA3-215ENST00000582821 KIF4BQ2VIQ3 1234 aa17.42■□□□□ 0.38
GGA3-215ENST00000582821 TBC1D10BQ4KMP7 808 aaPredicted RBP17.42■□□□□ 0.38
GGA3-215ENST00000582821 CDC37L1Q7L3B6 337 aa17.42■□□□□ 0.38
GGA3-215ENST00000582821 KLRG1Q96E93 195 aa17.42■□□□□ 0.38
GGA3-215ENST00000582821 RLBP1P12271 317 aa17.41■□□□□ 0.38
GGA3-215ENST00000582821 RBM26Q5T8P6 1007 aaKnown RBP17.41■□□□□ 0.38
GGA3-215ENST00000582821 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
GGA3-215ENST00000582821 MXD3Q9BW11 206 aa17.41■□□□□ 0.38
GGA3-215ENST00000582821 FAM205AQ6ZU69 1335 aa17.41■□□□□ 0.38
GGA3-215ENST00000582821 ZBTB7BO15156 539 aaPredicted RBP17.4■□□□□ 0.38
GGA3-215ENST00000582821 MS4A1P11836 297 aa17.4■□□□□ 0.38
GGA3-215ENST00000582821 IL15P40933 162 aaPredicted RBP17.4■□□□□ 0.38
GGA3-215ENST00000582821 GYG1P46976 350 aa17.4■□□□□ 0.38
GGA3-215ENST00000582821 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
GGA3-215ENST00000582821 OGFOD1Q8N543 542 aa17.4■□□□□ 0.38
GGA3-215ENST00000582821 MYOZ2Q9NPC6 264 aa17.4■□□□□ 0.38
GGA3-215ENST00000582821 SRGAP3O43295 1099 aa17.39■□□□□ 0.37
GGA3-215ENST00000582821 IFIT1P09914 478 aaKnown RBP17.39■□□□□ 0.37
GGA3-215ENST00000582821 CAVIN4Q5BKX8 364 aa17.39■□□□□ 0.37
GGA3-215ENST00000582821 LPIN2Q92539 896 aa17.39■□□□□ 0.37
GGA3-215ENST00000582821 FBXW7Q969H0 707 aa17.39■□□□□ 0.37
GGA3-215ENST00000582821 GLIS2Q9BZE0 524 aaPredicted RBP17.39■□□□□ 0.37
GGA3-215ENST00000582821 CEP126Q9P2H0 1117 aa17.39■□□□□ 0.37
GGA3-215ENST00000582821 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
GGA3-215ENST00000582821 PA2G4Q9UQ80 394 aaKnown RBP17.39■□□□□ 0.37
GGA3-215ENST00000582821 SCARF1Q14162 830 aa17.38■□□□□ 0.37
GGA3-215ENST00000582821 CST9Q5W186 159 aa17.38■□□□□ 0.37
GGA3-215ENST00000582821 CERS5Q8N5B7 392 aa17.38■□□□□ 0.37
GGA3-215ENST00000582821 JMYQ8N9B5 988 aa17.38■□□□□ 0.37
GGA3-215ENST00000582821 DCPSQ96C86 337 aaKnown RBP17.38■□□□□ 0.37
GGA3-215ENST00000582821 SIL1Q9H173 461 aa17.38■□□□□ 0.37
GGA3-215ENST00000582821 PCNTO95613 3336 aa17.38■□□□□ 0.37
GGA3-215ENST00000582821 TRAF5O00463 557 aa17.37■□□□□ 0.37
GGA3-215ENST00000582821 FMR1Q06787 632 aaKnown RBP eCLIP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms