RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 PODNQ7Z5L7 613 aa11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 NBPF11Q86T75 865 aa11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 IFNL1Q8IU54 200 aa11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 XAGE3Q8WTP9 111 aa11.47□□□□□ -0.57
CDK5RAP3-224ENST00000582275 MYO3BQ8WXR4 1341 aa11.46□□□□□ -0.57
CDK5RAP3-224ENST00000582275 UNCXA6NJT0 531 aa11.46□□□□□ -0.57
CDK5RAP3-224ENST00000582275 ZBTB48P10074 688 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-224ENST00000582275 PTPN12Q05209 780 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-224ENST00000582275 NFE2L2Q16236 605 aa11.46□□□□□ -0.57
CDK5RAP3-224ENST00000582275 APOBEC3FQ8IUX4 373 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-224ENST00000582275 R3HDMLQ9H3Y0 253 aa11.46□□□□□ -0.57
CDK5RAP3-224ENST00000582275 EFCC1Q9HA90 598 aa11.46□□□□□ -0.57
CDK5RAP3-224ENST00000582275 PROSER3Q2NL68 480 aa11.45□□□□□ -0.58
CDK5RAP3-224ENST00000582275 LDLRAD1Q5T700 205 aa11.45□□□□□ -0.58
CDK5RAP3-224ENST00000582275 SLC17A8Q8NDX2 589 aa11.45□□□□□ -0.58
CDK5RAP3-224ENST00000582275 PLBD2Q8NHP8 589 aa11.45□□□□□ -0.58
CDK5RAP3-224ENST00000582275 SLC10A4Q96EP9 437 aa11.45□□□□□ -0.58
CDK5RAP3-224ENST00000582275 PSME4Q14997 1843 aa11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 IRS4O14654 1257 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 ANXA1P04083 346 aa11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 ATP2B4P23634 1241 aa11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 PPP2R1AP30153 589 aa11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 TRIM26Q12899 539 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 PRAMEF18Q5VWM3 479 aa11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 FAM89AQ96GI7 184 aa11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 ANGEL1Q9UNK9 670 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 CEP290O15078 2479 aa11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 COL1A1P02452 1464 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-224ENST00000582275 DLG5Q8TDM6 1919 aa11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 XDHP47989 1333 aa11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 MAPK8IP3Q9UPT6 1336 aa11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 WNT10BO00744 389 aa11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 PPP1R12BO60237 982 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 SP3Q02447 781 aa11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 SLC4A8Q2Y0W8 1093 aa11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 NBPF9Q3BBW0 867 aa11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 OTUD5Q96G74 571 aa11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 ZNF333Q96JL9 665 aa11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 ISCA1Q9BUE6 129 aa11.43□□□□□ -0.58
CDK5RAP3-224ENST00000582275 H0YGN5 161 aa11.42□□□□□ -0.58
CDK5RAP3-224ENST00000582275 TRIM28Q13263 835 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP3-224ENST00000582275 MAP3K11Q16584 847 aa11.42□□□□□ -0.58
CDK5RAP3-224ENST00000582275 SLC9C1Q4G0N8 1177 aa11.42□□□□□ -0.58
CDK5RAP3-224ENST00000582275 CCDC152Q4G0S7 254 aa11.42□□□□□ -0.58
CDK5RAP3-224ENST00000582275 ANKRD13DQ6ZTN6 518 aa11.42□□□□□ -0.58
CDK5RAP3-224ENST00000582275 MIER1Q8N108 512 aa11.42□□□□□ -0.58
CDK5RAP3-224ENST00000582275 CD99L2Q8TCZ2 262 aa11.42□□□□□ -0.58
CDK5RAP3-224ENST00000582275 MKI67P46013 3256 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-224ENST00000582275 LMOD3Q0VAK6 560 aa11.41□□□□□ -0.58
CDK5RAP3-224ENST00000582275 PRKG1Q13976 671 aa11.41□□□□□ -0.58
CDK5RAP3-224ENST00000582275 STRIP1Q5VSL9 837 aa11.41□□□□□ -0.58
CDK5RAP3-224ENST00000582275 WNK4Q96J92 1243 aa11.41□□□□□ -0.58
CDK5RAP3-224ENST00000582275 PLEKHF1Q96S99 279 aa11.41□□□□□ -0.58
CDK5RAP3-224ENST00000582275 SCAF8Q9UPN6 1271 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-224ENST00000582275 PPP2R3BQ9Y5P8 575 aa11.41□□□□□ -0.58
CDK5RAP3-224ENST00000582275 IGF2BP3O00425 579 aaKnown RBP eCLIP11.4□□□□□ -0.58
CDK5RAP3-224ENST00000582275 CRHR2Q13324 411 aa11.4□□□□□ -0.58
CDK5RAP3-224ENST00000582275 SUPT20HL1Q3ZLR7 823 aa11.4□□□□□ -0.58
CDK5RAP3-224ENST00000582275 DACT2Q5SW24 774 aa11.4□□□□□ -0.58
CDK5RAP3-224ENST00000582275 ANKRD18AQ8IVF6 992 aa11.4□□□□□ -0.58
CDK5RAP3-224ENST00000582275 ZBTB38Q8NAP3 1195 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-224ENST00000582275 MED23Q9ULK4 1368 aa11.4□□□□□ -0.59
CDK5RAP3-224ENST00000582275 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
CDK5RAP3-224ENST00000582275 WDHD1O75717 1129 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-224ENST00000582275 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-224ENST00000582275 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
CDK5RAP3-224ENST00000582275 CDC5LQ99459 802 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-224ENST00000582275 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
CDK5RAP3-224ENST00000582275 COA1Q9GZY4 146 aa11.39□□□□□ -0.59
CDK5RAP3-224ENST00000582275 SEC31BQ9NQW1 1179 aa11.39□□□□□ -0.59
CDK5RAP3-224ENST00000582275 DBF4Q9UBU7 674 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-224ENST00000582275 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 PDE8AO60658 829 aa11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 SASH1O94885 1247 aa11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 HOXB7P09629 217 aa11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 IREB2P48200 963 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 RTL5Q5HYW3 569 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 DPF3Q92784 378 aa11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 FBXW7Q969H0 707 aa11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 DEFB129Q9H1M3 183 aa11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 HYPKQ9NX55 129 aa11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 CHPF2Q9P2E5 772 aa11.38□□□□□ -0.59
CDK5RAP3-224ENST00000582275 LAMB1P07942 1786 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 A0A1W2PPC1 479 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 MYO1BO43795 1136 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 GNRH1P01148 92 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 PRMT2P55345 433 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 KIF22Q14807 665 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 HDGFL1Q5TGJ6 251 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 ANKRD13AQ8IZ07 590 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 HTATIP2Q9BUP3 242 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 ZFYVE28Q9HCC9 887 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 PTCH2Q9Y6C5 1203 aa11.37□□□□□ -0.59
CDK5RAP3-224ENST00000582275 RIPK4P57078 832 aa11.36□□□□□ -0.59
CDK5RAP3-224ENST00000582275 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
CDK5RAP3-224ENST00000582275 DLGAP5Q15398 846 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms