RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 HACL1Q9UJ83 578 aa12.94□□□□□ -0.34
TOP3A-212ENST00000582122 MYO3BQ8WXR4 1341 aa12.93□□□□□ -0.34
TOP3A-212ENST00000582122 COL4A1P02462 1669 aa12.93□□□□□ -0.34
TOP3A-212ENST00000582122 PLIN1O60240 522 aa12.93□□□□□ -0.34
TOP3A-212ENST00000582122 HMMRO75330 724 aa12.93□□□□□ -0.34
TOP3A-212ENST00000582122 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
TOP3A-212ENST00000582122 ATP8B2P98198 1209 aa12.93□□□□□ -0.34
TOP3A-212ENST00000582122 CXCL9Q07325 125 aa12.93□□□□□ -0.34
TOP3A-212ENST00000582122 CAVIN4Q5BKX8 364 aa12.93□□□□□ -0.34
TOP3A-212ENST00000582122 RPAP2Q8IXW5 612 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-212ENST00000582122 DBNDD1Q9H9R9 158 aa12.93□□□□□ -0.34
TOP3A-212ENST00000582122 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
TOP3A-212ENST00000582122 GJA3Q9Y6H8 435 aa12.93□□□□□ -0.34
TOP3A-212ENST00000582122 SPEF2Q9C093 1822 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 ZNF541Q9H0D2 1346 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 USP17L3A6NCW0 530 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 USP17L4A6NCW7 530 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 TAF5LO75529 589 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 SLC5A1P13866 664 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 RRP1P56182 461 aaKnown RBP12.92□□□□□ -0.34
TOP3A-212ENST00000582122 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
TOP3A-212ENST00000582122 AAMPQ13685 434 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 DOK7Q18PE1 504 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 LRRC24Q50LG9 513 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 HSP90AB4PQ58FF6 505 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 USP17L1Q7RTZ2 530 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 SLC51AQ86UW1 340 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 VPS37DQ86XT2 251 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 AGBL3Q8NEM8 1001 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 HELBQ8NG08 1087 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-212ENST00000582122 SSH3Q8TE77 659 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 LPIN2Q92539 896 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
TOP3A-212ENST00000582122 CREBZFQ9NS37 354 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 ZBTB40Q9NUA8 1239 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 COG6Q9Y2V7 657 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 SCN4AP35499 1836 aa12.92□□□□□ -0.34
TOP3A-212ENST00000582122 ZNF609O15014 1411 aa12.91□□□□□ -0.34
TOP3A-212ENST00000582122 H7C1D1 291 aa12.91□□□□□ -0.34
TOP3A-212ENST00000582122 RAD17O75943 681 aa12.91□□□□□ -0.34
TOP3A-212ENST00000582122 VIL1P09327 827 aaKnown RBP12.91□□□□□ -0.34
TOP3A-212ENST00000582122 POLA2Q14181 598 aa12.91□□□□□ -0.34
TOP3A-212ENST00000582122 STRIP1Q5VSL9 837 aa12.91□□□□□ -0.34
TOP3A-212ENST00000582122 VGLL2Q8N8G2 317 aa12.91□□□□□ -0.34
TOP3A-212ENST00000582122 YDJCA8MPS7 323 aa12.9□□□□□ -0.34
TOP3A-212ENST00000582122 PSMD14O00487 310 aa12.9□□□□□ -0.34
TOP3A-212ENST00000582122 IL1R1P14778 569 aa12.9□□□□□ -0.34
TOP3A-212ENST00000582122 HIBADHP31937 336 aaKnown RBP12.9□□□□□ -0.34
TOP3A-212ENST00000582122 EPHX2P34913 555 aa12.9□□□□□ -0.34
TOP3A-212ENST00000582122 USP50Q70EL3 339 aaPredicted RBP12.9□□□□□ -0.34
TOP3A-212ENST00000582122 ATG9AQ7Z3C6 839 aa12.9□□□□□ -0.34
TOP3A-212ENST00000582122 KLHDC4Q8TBB5 520 aa12.9□□□□□ -0.34
TOP3A-212ENST00000582122 SIL1Q9H173 461 aa12.9□□□□□ -0.34
TOP3A-212ENST00000582122 TAF1DQ9H5J8 278 aaPredicted RBP12.9□□□□□ -0.34
TOP3A-212ENST00000582122 CD209Q9NNX6 404 aa12.9□□□□□ -0.34
TOP3A-212ENST00000582122 GNL3LQ9NVN8 582 aaKnown RBP12.9□□□□□ -0.34
TOP3A-212ENST00000582122 GPRC5DQ9NZD1 345 aa12.9□□□□□ -0.34
TOP3A-212ENST00000582122 COL4A5P29400 1685 aa12.89□□□□□ -0.35
TOP3A-212ENST00000582122 ZBTB22O15209 634 aa12.89□□□□□ -0.35
TOP3A-212ENST00000582122 SASH1O94885 1247 aa12.89□□□□□ -0.35
TOP3A-212ENST00000582122 GMPSP49915 693 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-212ENST00000582122 FKBP1AP62942 108 aaKnown RBP12.89□□□□□ -0.35
TOP3A-212ENST00000582122 TTLL5Q6EMB2 1281 aa12.89□□□□□ -0.35
TOP3A-212ENST00000582122 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
TOP3A-212ENST00000582122 CEP85Q6P2H3 762 aa12.89□□□□□ -0.35
TOP3A-212ENST00000582122 RSBN1LQ6PCB5 846 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-212ENST00000582122 LDHDQ86WU2 507 aa12.89□□□□□ -0.35
TOP3A-212ENST00000582122 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
TOP3A-212ENST00000582122 GPR101Q96P66 508 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-212ENST00000582122 ADARB2Q9NS39 739 aaKnown RBP12.89□□□□□ -0.35
TOP3A-212ENST00000582122 NOP58Q9Y2X3 529 aaKnown RBP12.89□□□□□ -0.35
TOP3A-212ENST00000582122 PNMA6EA0A0J9YXQ4 647 aa12.88□□□□□ -0.35
TOP3A-212ENST00000582122 FGFR2P21802 821 aa12.88□□□□□ -0.35
TOP3A-212ENST00000582122 SCNN1DP51172 638 aa12.88□□□□□ -0.35
TOP3A-212ENST00000582122 OS9Q13438 667 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-212ENST00000582122 ATP2B3Q16720 1220 aa12.88□□□□□ -0.35
TOP3A-212ENST00000582122 FBXO33Q7Z6M2 555 aa12.88□□□□□ -0.35
TOP3A-212ENST00000582122 OGFOD1Q8N543 542 aa12.88□□□□□ -0.35
TOP3A-212ENST00000582122 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
TOP3A-212ENST00000582122 CNOT7Q9UIV1 285 aaKnown RBP12.88□□□□□ -0.35
TOP3A-212ENST00000582122 PA2G4Q9UQ80 394 aaKnown RBP12.88□□□□□ -0.35
TOP3A-212ENST00000582122 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
TOP3A-212ENST00000582122 POTECB2RU33 542 aa12.87□□□□□ -0.35
TOP3A-212ENST00000582122 SEMA3EO15041 775 aa12.87□□□□□ -0.35
TOP3A-212ENST00000582122 FRAT2O75474 233 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-212ENST00000582122 SURF6O75683 361 aaKnown RBP12.87□□□□□ -0.35
TOP3A-212ENST00000582122 TXNRD3Q86VQ6 643 aa12.87□□□□□ -0.35
TOP3A-212ENST00000582122 TDRD7Q8NHU6 1098 aaKnown RBP12.87□□□□□ -0.35
TOP3A-212ENST00000582122 ZC3H15Q8WU90 426 aaKnown RBP12.87□□□□□ -0.35
TOP3A-212ENST00000582122 TBC1D22AQ8WUA7 517 aa12.87□□□□□ -0.35
TOP3A-212ENST00000582122 FAM84BQ96KN1 310 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-212ENST00000582122 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
TOP3A-212ENST00000582122 HDAC9Q9UKV0 1011 aa12.87□□□□□ -0.35
TOP3A-212ENST00000582122 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
TOP3A-212ENST00000582122 WTIPA6NIX2 430 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-212ENST00000582122 USP17L8P0C7I0 530 aa12.86□□□□□ -0.35
TOP3A-212ENST00000582122 AIDAQ96BJ3 306 aa12.86□□□□□ -0.35
TOP3A-212ENST00000582122 PRDM10Q9NQV6 1147 aa12.86□□□□□ -0.35
TOP3A-212ENST00000582122 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
TOP3A-212ENST00000582122 SUGT1Q9Y2Z0 365 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms