RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 RAB11FIP3O75154 756 aa11.02□□□□□ -0.65
RTTN-208ENST00000581709 HIBADHP31937 336 aaKnown RBP11.02□□□□□ -0.65
RTTN-208ENST00000581709 ATP2B3Q16720 1220 aa11.02□□□□□ -0.65
RTTN-208ENST00000581709 TXNRD3Q86VQ6 643 aa11.02□□□□□ -0.65
RTTN-208ENST00000581709 RWDD1Q9H446 243 aaPredicted RBP11.02□□□□□ -0.65
RTTN-208ENST00000581709 DBNDD1Q9H9R9 158 aa11.02□□□□□ -0.65
RTTN-208ENST00000581709 DLEC1Q9Y238 1755 aa11.02□□□□□ -0.65
RTTN-208ENST00000581709 MED23Q9ULK4 1368 aa11.02□□□□□ -0.65
RTTN-208ENST00000581709 LAMB2P55268 1798 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
RTTN-208ENST00000581709 SASH1O94885 1247 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 NEFLP07196 543 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 FGFR2P21802 821 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 TIMM10P62072 90 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 GORABQ5T7V8 394 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 CIAPIN1Q6FI81 312 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 GPC2Q8N158 579 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 FAM84BQ96KN1 310 aaPredicted RBP11.01□□□□□ -0.65
RTTN-208ENST00000581709 NEUROD6Q96NK8 337 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 CD209Q9NNX6 404 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 GPR108Q9NPR9 543 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 GNL3LQ9NVN8 582 aaKnown RBP11.01□□□□□ -0.65
RTTN-208ENST00000581709 EXOC6BQ9Y2D4 811 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 KDM2BQ8NHM5 1336 aa11.01□□□□□ -0.65
RTTN-208ENST00000581709 APBB1O00213 710 aa11□□□□□ -0.65
RTTN-208ENST00000581709 RAD17O75943 681 aa11□□□□□ -0.65
RTTN-208ENST00000581709 KLRK1P26718 216 aa11□□□□□ -0.65
RTTN-208ENST00000581709 GYG1P46976 350 aa11□□□□□ -0.65
RTTN-208ENST00000581709 CXCL9Q07325 125 aa11□□□□□ -0.65
RTTN-208ENST00000581709 FBXO33Q7Z6M2 555 aa11□□□□□ -0.65
RTTN-208ENST00000581709 RHPN1Q8TCX5 695 aa11□□□□□ -0.65
RTTN-208ENST00000581709 KIF1BPQ96EK5 621 aa11□□□□□ -0.65
RTTN-208ENST00000581709 DCTPP1Q9H773 170 aa11□□□□□ -0.65
RTTN-208ENST00000581709 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
RTTN-208ENST00000581709 GJA3Q9Y6H8 435 aa11□□□□□ -0.65
RTTN-208ENST00000581709 BRCA1P38398 1863 aaKnown RBP11□□□□□ -0.65
RTTN-208ENST00000581709 COL4A1P02462 1669 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 A0A1B0GUL7 405 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 USP17L3A6NCW0 530 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 USP17L4A6NCW7 530 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 YDJCA8MPS7 323 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 DDNO94850 711 aaPredicted RBP10.99□□□□□ -0.65
RTTN-208ENST00000581709 IL1R1P14778 569 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 BCAMP50895 628 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 HDAC1Q13547 482 aaPredicted RBP10.99□□□□□ -0.65
RTTN-208ENST00000581709 TTLL5Q6EMB2 1281 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 USP17L1Q7RTZ2 530 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 CLASRPQ8N2M8 674 aaKnown RBP10.99□□□□□ -0.65
RTTN-208ENST00000581709 ZNF526Q8TF50 670 aaPredicted RBP10.99□□□□□ -0.65
RTTN-208ENST00000581709 KCNQ5Q9NR82 932 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 FOXD4L1Q9NU39 408 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 ARFGEF1Q9Y6D6 1849 aa10.99□□□□□ -0.65
RTTN-208ENST00000581709 VIL1P09327 827 aaKnown RBP10.98□□□□□ -0.65
RTTN-208ENST00000581709 GTF2IP78347 998 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 TNNI3KQ59H18 835 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 CCDC158Q5M9N0 1113 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 STRIP1Q5VSL9 837 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 TDRD7Q8NHU6 1098 aaKnown RBP10.98□□□□□ -0.65
RTTN-208ENST00000581709 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 GCC1Q96CN9 775 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 XAGE2Q96GT9 111 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 LRRCC1Q9C099 1032 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 BCL11AQ9H165 835 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 GPBP1L1Q9HC44 474 aaPredicted RBP10.98□□□□□ -0.65
RTTN-208ENST00000581709 FPGT-TNNI3KV9GXZ4 949 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 IRS2Q9Y4H2 1338 aa10.98□□□□□ -0.65
RTTN-208ENST00000581709 PSMD14O00487 310 aa10.97□□□□□ -0.65
RTTN-208ENST00000581709 IFIT2P09913 472 aaKnown RBP10.97□□□□□ -0.65
RTTN-208ENST00000581709 VEGFAP15692 232 aaPredicted RBP10.97□□□□□ -0.65
RTTN-208ENST00000581709 RPS12P25398 132 aaKnown RBP10.97□□□□□ -0.65
RTTN-208ENST00000581709 LMOD1P29536 600 aaPredicted RBP10.97□□□□□ -0.65
RTTN-208ENST00000581709 HOXD11P31277 338 aaPredicted RBP10.97□□□□□ -0.65
RTTN-208ENST00000581709 CCDC102BQ68D86 513 aa10.97□□□□□ -0.65
RTTN-208ENST00000581709 RRAGCQ9HB90 399 aa10.97□□□□□ -0.65
RTTN-208ENST00000581709 IL1RAPL2Q9NP60 686 aa10.97□□□□□ -0.65
RTTN-208ENST00000581709 ZNF541Q9H0D2 1346 aa10.97□□□□□ -0.65
RTTN-208ENST00000581709 TAF1P21675 1872 aa10.97□□□□□ -0.65
RTTN-208ENST00000581709 MYH3P11055 1940 aa10.96□□□□□ -0.65
RTTN-208ENST00000581709 IQCA1LA6NCM1 817 aa10.96□□□□□ -0.65
RTTN-208ENST00000581709 H7C1D1 291 aa10.96□□□□□ -0.65
RTTN-208ENST00000581709 SEMA3EO15041 775 aa10.96□□□□□ -0.65
RTTN-208ENST00000581709 ADORA1P30542 326 aa10.96□□□□□ -0.65
RTTN-208ENST00000581709 RSBN1LQ6PCB5 846 aaPredicted RBP10.96□□□□□ -0.65
RTTN-208ENST00000581709 AACSQ86V21 672 aa10.96□□□□□ -0.65
RTTN-208ENST00000581709 ZNF784Q8NCA9 323 aaPredicted RBP10.96□□□□□ -0.65
RTTN-208ENST00000581709 AGBL3Q8NEM8 1001 aa10.96□□□□□ -0.65
RTTN-208ENST00000581709 DPF2Q92785 391 aa10.96□□□□□ -0.65
RTTN-208ENST00000581709 EAF2Q96CJ1 260 aaPredicted RBP10.96□□□□□ -0.65
RTTN-208ENST00000581709 L3MBTL3Q96JM7 780 aaPredicted RBP10.96□□□□□ -0.65
RTTN-208ENST00000581709 CCDC8Q9H0W5 538 aaPredicted RBP10.96□□□□□ -0.65
RTTN-208ENST00000581709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.96□□□□□ -0.65
RTTN-208ENST00000581709 MYO3BQ8WXR4 1341 aa10.95□□□□□ -0.66
RTTN-208ENST00000581709 UQCRFS1P1P0C7P4 283 aa10.95□□□□□ -0.66
RTTN-208ENST00000581709 GMPSP49915 693 aaPredicted RBP10.95□□□□□ -0.66
RTTN-208ENST00000581709 MMP14P50281 582 aa10.95□□□□□ -0.66
RTTN-208ENST00000581709 TTC39AQ5SRH9 613 aa10.95□□□□□ -0.66
RTTN-208ENST00000581709 DACT2Q5SW24 774 aa10.95□□□□□ -0.66
RTTN-208ENST00000581709 ANKRD45Q5TZF3 282 aa10.95□□□□□ -0.66
RTTN-208ENST00000581709 OGFOD1Q8N543 542 aa10.95□□□□□ -0.66
RTTN-208ENST00000581709 WDR66Q8TBY9 1149 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms