RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 NIM1KQ8IY84 436 aa12.37□□□□□ -0.43
TOP3A-211ENST00000581536 TRMT2AQ8IZ69 625 aaKnown RBP12.37□□□□□ -0.43
TOP3A-211ENST00000581536 GPC2Q8N158 579 aa12.37□□□□□ -0.43
TOP3A-211ENST00000581536 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
TOP3A-211ENST00000581536 DNAJC5GQ8N7S2 189 aa12.37□□□□□ -0.43
TOP3A-211ENST00000581536 SMC1BQ8NDV3 1235 aa12.37□□□□□ -0.43
TOP3A-211ENST00000581536 SUPT20HQ8NEM7 779 aa12.37□□□□□ -0.43
TOP3A-211ENST00000581536 GREM2Q9H772 168 aa12.37□□□□□ -0.43
TOP3A-211ENST00000581536 KCNQ5Q9NR82 932 aa12.37□□□□□ -0.43
TOP3A-211ENST00000581536 DUOX1Q9NRD9 1551 aa12.37□□□□□ -0.43
TOP3A-211ENST00000581536 PCNTO95613 3336 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 E9PSI1 815 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 RAD17O75943 681 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 EPS15P42566 896 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 CTSWP56202 376 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 KIAA2012Q0VF49 1180 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 DOK7Q18PE1 504 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 EAPPQ56P03 285 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-211ENST00000581536 SLC4A10Q6U841 1118 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 TMC4Q7Z404 712 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 LINS1Q8NG48 757 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 TBC1D16Q8TBP0 767 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 VPS33BQ9H267 617 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 HACL1Q9UJ83 578 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 ZNRF3Q9ULT6 936 aa12.36□□□□□ -0.43
TOP3A-211ENST00000581536 HSP90B1P14625 803 aaKnown RBP12.35□□□□□ -0.43
TOP3A-211ENST00000581536 EPHX2P34913 555 aa12.35□□□□□ -0.43
TOP3A-211ENST00000581536 SCNN1DP51172 638 aa12.35□□□□□ -0.43
TOP3A-211ENST00000581536 APLP1P51693 650 aa12.35□□□□□ -0.43
TOP3A-211ENST00000581536 WASHC4Q2M389 1173 aa12.35□□□□□ -0.43
TOP3A-211ENST00000581536 SSH1Q8WYL5 1049 aa12.35□□□□□ -0.43
TOP3A-211ENST00000581536 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
TOP3A-211ENST00000581536 DBNDD1Q9H9R9 158 aa12.35□□□□□ -0.43
TOP3A-211ENST00000581536 SCN9AQ15858 1988 aa12.35□□□□□ -0.43
TOP3A-211ENST00000581536 IQCA1LA6NCM1 817 aa12.34□□□□□ -0.43
TOP3A-211ENST00000581536 CSF1RP07333 972 aa12.34□□□□□ -0.43
TOP3A-211ENST00000581536 FOXO4P98177 505 aa12.34□□□□□ -0.43
TOP3A-211ENST00000581536 EPHA10Q5JZY3 1008 aa12.34□□□□□ -0.43
TOP3A-211ENST00000581536 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
TOP3A-211ENST00000581536 ANKIB1Q9P2G1 1089 aa12.34□□□□□ -0.43
TOP3A-211ENST00000581536 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
TOP3A-211ENST00000581536 FOXK1P85037 733 aa12.33□□□□□ -0.44
TOP3A-211ENST00000581536 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
TOP3A-211ENST00000581536 PODXL2Q9NZ53 605 aa12.33□□□□□ -0.44
TOP3A-211ENST00000581536 MINPP1Q9UNW1 487 aa12.33□□□□□ -0.44
TOP3A-211ENST00000581536 SNPHO15079 494 aa12.32□□□□□ -0.44
TOP3A-211ENST00000581536 UFL1O94874 794 aa12.32□□□□□ -0.44
TOP3A-211ENST00000581536 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-211ENST00000581536 ITGA6P23229 1130 aa12.32□□□□□ -0.44
TOP3A-211ENST00000581536 GMPSP49915 693 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-211ENST00000581536 FMR1Q06787 632 aaKnown RBP eCLIP12.32□□□□□ -0.44
TOP3A-211ENST00000581536 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
TOP3A-211ENST00000581536 MAP1SQ66K74 1059 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-211ENST00000581536 CIAPIN1Q6FI81 312 aa12.32□□□□□ -0.44
TOP3A-211ENST00000581536 LARP6Q9BRS8 491 aaKnown RBP12.32□□□□□ -0.44
TOP3A-211ENST00000581536 ZC3H12CQ9C0D7 883 aaKnown RBP12.32□□□□□ -0.44
TOP3A-211ENST00000581536 ADAMTSL1Q8N6G6 1762 aa12.32□□□□□ -0.44
TOP3A-211ENST00000581536 PSMD14O00487 310 aa12.31□□□□□ -0.44
TOP3A-211ENST00000581536 ECE2O60344 883 aa12.31□□□□□ -0.44
TOP3A-211ENST00000581536 LDHDQ86WU2 507 aa12.31□□□□□ -0.44
TOP3A-211ENST00000581536 CDC5LQ99459 802 aaKnown RBP12.31□□□□□ -0.44
TOP3A-211ENST00000581536 BSDC1Q9NW68 430 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-211ENST00000581536 GPRC5DQ9NZD1 345 aa12.31□□□□□ -0.44
TOP3A-211ENST00000581536 GGA1Q9UJY5 639 aa12.31□□□□□ -0.44
TOP3A-211ENST00000581536 SNAP23O00161 211 aa12.3□□□□□ -0.44
TOP3A-211ENST00000581536 GRM8O00222 908 aa12.3□□□□□ -0.44
TOP3A-211ENST00000581536 NBPF7P0C2Y1 421 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-211ENST00000581536 LMOD1P29536 600 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-211ENST00000581536 HIRAP54198 1017 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-211ENST00000581536 TNIP1Q15025 636 aa12.3□□□□□ -0.44
TOP3A-211ENST00000581536 LMBR1LQ6UX01 489 aa12.3□□□□□ -0.44
TOP3A-211ENST00000581536 CNTROBQ8N137 903 aa12.3□□□□□ -0.44
TOP3A-211ENST00000581536 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
TOP3A-211ENST00000581536 ZNF594Q96JF6 807 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-211ENST00000581536 EYA3Q99504 573 aa12.3□□□□□ -0.44
TOP3A-211ENST00000581536 SRCIN1Q9C0H9 1055 aa12.3□□□□□ -0.44
TOP3A-211ENST00000581536 C9orf78Q9NZ63 289 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-211ENST00000581536 CNOT7Q9UIV1 285 aaKnown RBP12.3□□□□□ -0.44
TOP3A-211ENST00000581536 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
TOP3A-211ENST00000581536 ALDH1L1O75891 902 aa12.29□□□□□ -0.44
TOP3A-211ENST00000581536 ATP2B4P23634 1241 aa12.29□□□□□ -0.44
TOP3A-211ENST00000581536 MFSD10Q14728 455 aa12.29□□□□□ -0.44
TOP3A-211ENST00000581536 PNMA8AQ86V59 439 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-211ENST00000581536 TXNRD3Q86VQ6 643 aa12.29□□□□□ -0.44
TOP3A-211ENST00000581536 HELBQ8NG08 1087 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-211ENST00000581536 DDX27Q96GQ7 796 aaKnown RBP12.29□□□□□ -0.44
TOP3A-211ENST00000581536 SUCLG2Q96I99 432 aa12.29□□□□□ -0.44
TOP3A-211ENST00000581536 RTL9Q8NET4 1388 aa12.29□□□□□ -0.44
TOP3A-211ENST00000581536 ANKRD18BA2A2Z9 1011 aa12.28□□□□□ -0.44
TOP3A-211ENST00000581536 TAF5LO75529 589 aa12.28□□□□□ -0.44
TOP3A-211ENST00000581536 IGHMBP2P38935 993 aaKnown RBP12.28□□□□□ -0.44
TOP3A-211ENST00000581536 CCT4P50991 539 aaKnown RBP12.28□□□□□ -0.44
TOP3A-211ENST00000581536 DSG2Q14126 1118 aa12.28□□□□□ -0.44
TOP3A-211ENST00000581536 ALDH1L2Q3SY69 923 aa12.28□□□□□ -0.44
TOP3A-211ENST00000581536 USP50Q70EL3 339 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-211ENST00000581536 MPHOSPH8Q99549 860 aa12.28□□□□□ -0.44
TOP3A-211ENST00000581536 ADARB2Q9NS39 739 aaKnown RBP12.28□□□□□ -0.44
TOP3A-211ENST00000581536 NOB1Q9ULX3 412 aaKnown RBP12.28□□□□□ -0.44
TOP3A-211ENST00000581536 XDHP47989 1333 aa12.28□□□□□ -0.44
TOP3A-211ENST00000581536 PASKQ96RG2 1323 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms