RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SAMD15Q9P1V8 674 aa16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 CPLX4Q7Z7G2 160 aa16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 ARFGAP2Q8N6H7 521 aa16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 TEX13AQ9BXU3 409 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 USP37Q86T82 979 aa16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 CCDC160A6NGH7 325 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 C10orf67Q8IYJ2 551 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 ESR2Q92731 530 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 KIAA0586Q9BVV6 1533 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 TMEM110-MUSTN1A8MSY1 372 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 GSTA5Q7RTV2 222 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 NEK11Q8NG66 645 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 CCDC42Q96M95 316 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 ATP5J2-PTCD1G3V325 749 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 BRAPQ7Z569 592 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 AFAP1L1Q8TED9 768 aa16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 EIF2AK4Q9P2K8 1649 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-217ENST00000581241 ATP2A1O14983 1001 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 TNNC1P63316 161 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 HEATR3Q7Z4Q2 680 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 IFT81Q8WYA0 676 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 ZEB2O60315 1214 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 TSPY3P0CV98 308 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 TSPY8P0CW00 308 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 GPTP24298 496 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 VAV2P52735 878 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 GBP6Q6ZN66 633 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 GTF3C6Q969F1 213 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 SAMM50Q9Y512 469 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 TUBB2AQ13885 445 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 TUBB2BQ9BVA1 445 aa16.46■□□□□ 0.23
CSNK1D-217ENST00000581241 HLA-DOAP06340 250 aa16.46■□□□□ 0.22
CSNK1D-217ENST00000581241 ATL3Q6DD88 541 aa16.46■□□□□ 0.22
CSNK1D-217ENST00000581241 BAG1Q99933 345 aaPredicted RBP16.46■□□□□ 0.22
CSNK1D-217ENST00000581241 CREB3L3Q68CJ9 461 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 ZGPATQ8N5A5 531 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 MRVI1Q9Y6F6 885 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 AKR1B15C9JRZ8 316 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 CNGA4Q8IV77 575 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 UTP14AQ9BVJ6 771 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 EVCP57679 992 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 LRRC45Q96CN5 670 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 DDX23Q9BUQ8 820 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 SYNCQ9H7C4 482 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 TRIM75PA6NK02 468 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 RAPGEF3O95398 923 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 ZBTB16Q05516 673 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 GNAQP50148 359 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 SF3B2Q13435 895 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 GRIPAP1Q4V328 841 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 CHPF2Q9P2E5 772 aa16.45■□□□□ 0.22
CSNK1D-217ENST00000581241 ALDH1L1O75891 902 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 CALM1P0DP23 149 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 CALM2P0DP24 149 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 CALM3P0DP25 149 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 SETDB1Q15047 1291 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 B4GALNT4Q76KP1 1039 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 RGS22Q8NE09 1264 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 MTRF1LQ9UGC7 380 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 RBSNQ9H1K0 784 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 SLC4A8Q2Y0W8 1093 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 USP26Q9BXU7 913 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 ELP1O95163 1332 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 PABPN1LA6NDY0 278 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 SNRPA1P09661 255 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 CFAP58Q5T655 872 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 IFNL2Q8IZJ0 200 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 CEP83Q9Y592 693 aa16.44■□□□□ 0.22
CSNK1D-217ENST00000581241 DNAJC21Q5F1R6 531 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 NAP1L3Q99457 506 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 CABP5Q9NP86 173 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 ANAPC4Q9UJX5 808 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 PHACTR2O75167 634 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 CCDC63Q8NA47 563 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 UBLCP1Q8WVY7 318 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 PAG1Q9NWQ8 432 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 PARD3Q8TEW0 1356 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 NPHP3Q7Z494 1330 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 SMIM23A6NLE4 172 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 APOBRQ0VD83 1088 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 RAD50Q92878 1312 aa16.43■□□□□ 0.22
CSNK1D-217ENST00000581241 CYP7A1P22680 504 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 CHMP4BP1P59074 171 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 NOL3O60936 208 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 ARID5AQ03989 594 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 CCDC50Q8IVM0 306 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 TRIM14Q14142 442 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 CEP85Q6P2H3 762 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 PUS7Q96PZ0 661 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms