RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 GADD45BO75293 160 aaPredicted RBP7.73□□□□□ -1.17
NF1-220ENST00000581113 LDHBP07195 334 aaKnown RBP7.73□□□□□ -1.17
NF1-220ENST00000581113 ERCC3P19447 782 aa7.73□□□□□ -1.17
NF1-220ENST00000581113 GRIK5Q16478 980 aa7.73□□□□□ -1.17
NF1-220ENST00000581113 POP1Q99575 1024 aaKnown RBP7.73□□□□□ -1.17
NF1-220ENST00000581113 NLRP2Q9NX02 1062 aa7.73□□□□□ -1.17
NF1-220ENST00000581113 WWC3Q9ULE0 1092 aa7.73□□□□□ -1.17
NF1-220ENST00000581113 A0A1W2PP55 124 aa7.72□□□□□ -1.17
NF1-220ENST00000581113 NFKBIEO00221 500 aa7.72□□□□□ -1.17
NF1-220ENST00000581113 PDE2AO00408 941 aaPredicted RBP7.72□□□□□ -1.17
NF1-220ENST00000581113 PIK3R2O00459 728 aa7.72□□□□□ -1.17
NF1-220ENST00000581113 NID1P14543 1247 aa7.72□□□□□ -1.17
NF1-220ENST00000581113 PI16Q6UXB8 463 aa7.72□□□□□ -1.17
NF1-220ENST00000581113 EHD4Q9H223 541 aa7.72□□□□□ -1.17
NF1-220ENST00000581113 FAM177BA6PVY3 158 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 COL9A3Q14050 684 aaPredicted RBP7.71□□□□□ -1.18
NF1-220ENST00000581113 COL19A1Q14993 1142 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.71□□□□□ -1.18
NF1-220ENST00000581113 MSL1Q68DK7 614 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 ALG1LQ6GMV1 187 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 WFDC8Q8IUA0 241 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 IL22RA1Q8N6P7 574 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 TMEM102Q8N9M5 508 aaPredicted RBP7.71□□□□□ -1.18
NF1-220ENST00000581113 ASAP3Q8TDY4 903 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 TRIM11Q96F44 468 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 PLVAPQ9BX97 442 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 LIN7BQ9HAP6 207 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 PODXL2Q9NZ53 605 aa7.71□□□□□ -1.18
NF1-220ENST00000581113 PTPRAP18433 802 aa7.7□□□□□ -1.18
NF1-220ENST00000581113 TRAPPC3LQ5T215 181 aa7.7□□□□□ -1.18
NF1-220ENST00000581113 KIAA0319Q5VV43 1072 aa7.7□□□□□ -1.18
NF1-220ENST00000581113 ADAMTSL4Q6UY14 1074 aa7.7□□□□□ -1.18
NF1-220ENST00000581113 DMRTC2Q8IXT2 367 aaPredicted RBP7.7□□□□□ -1.18
NF1-220ENST00000581113 NXPE3Q969Y0 559 aa7.7□□□□□ -1.18
NF1-220ENST00000581113 CDC25BP30305 580 aa7.69□□□□□ -1.18
NF1-220ENST00000581113 FBF1Q8TES7 1133 aa7.69□□□□□ -1.18
NF1-220ENST00000581113 SUV39H2Q9H5I1 410 aa7.69□□□□□ -1.18
NF1-220ENST00000581113 CCDC9Q9Y3X0 531 aaKnown RBP7.69□□□□□ -1.18
NF1-220ENST00000581113 METTL12A8MUP2 240 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 CDC27P30260 824 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 BAG6P46379 1132 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 BCL2L13Q9BXK5 485 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 SH2B1Q9NRF2 756 aaPredicted RBP7.68□□□□□ -1.18
NF1-220ENST00000581113 NOP53Q9NZM5 478 aaKnown RBP7.68□□□□□ -1.18
NF1-220ENST00000581113 SPDYE3A6NKU9 549 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 PRPF40AO75400 957 aaKnown RBP7.68□□□□□ -1.18
NF1-220ENST00000581113 GRM2Q14416 872 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 TXNDC11Q6PKC3 985 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 FBXO33Q7Z6M2 555 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 CCNJLQ8IV13 435 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 CACTIN-AS1Q8N1I8 211 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 TCF12Q99081 682 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 BHLHE41Q9C0J9 482 aaPredicted RBP7.68□□□□□ -1.18
NF1-220ENST00000581113 PPME1Q9Y570 386 aa7.68□□□□□ -1.18
NF1-220ENST00000581113 FAM229AH3BQW9 127 aa7.67□□□□□ -1.18
NF1-220ENST00000581113 RNF225M0QZC1 329 aaPredicted RBP7.67□□□□□ -1.18
NF1-220ENST00000581113 EPHA1P21709 976 aa7.67□□□□□ -1.18
NF1-220ENST00000581113 GRIA4P48058 902 aa7.67□□□□□ -1.18
NF1-220ENST00000581113 FGD1P98174 961 aa7.67□□□□□ -1.18
NF1-220ENST00000581113 BSNDQ8WZ55 320 aa7.67□□□□□ -1.18
NF1-220ENST00000581113 DUSP9Q99956 384 aaKnown RBP7.67□□□□□ -1.18
NF1-220ENST00000581113 BCO2Q9BYV7 579 aa7.67□□□□□ -1.18
NF1-220ENST00000581113 TRAK1Q9UPV9 953 aa7.67□□□□□ -1.18
NF1-220ENST00000581113 SPG7Q9UQ90 795 aa7.67□□□□□ -1.18
NF1-220ENST00000581113 LINC01387J3KSC0 135 aa7.66□□□□□ -1.18
NF1-220ENST00000581113 CABP4P57796 275 aa7.66□□□□□ -1.18
NF1-220ENST00000581113 TAGLNQ01995 201 aaKnown RBP7.66□□□□□ -1.18
NF1-220ENST00000581113 NXPE4Q6UWF7 544 aa7.66□□□□□ -1.18
NF1-220ENST00000581113 GIPC2Q8TF65 315 aa7.66□□□□□ -1.18
NF1-220ENST00000581113 ADAM19Q9H013 955 aa7.66□□□□□ -1.18
NF1-220ENST00000581113 A0A096LPE4 126 aa7.65□□□□□ -1.18
NF1-220ENST00000581113 A0A0A0MRY4 1105 aa7.65□□□□□ -1.18
NF1-220ENST00000581113 A0A1W2PPZ6 126 aa7.65□□□□□ -1.18
NF1-220ENST00000581113 RAC1P63000 192 aa7.65□□□□□ -1.18
NF1-220ENST00000581113 TRIM28Q13263 835 aaKnown RBP7.65□□□□□ -1.18
NF1-220ENST00000581113 SPRED3Q2MJR0 410 aa7.65□□□□□ -1.18
NF1-220ENST00000581113 PRRT3Q5FWE3 981 aa7.65□□□□□ -1.18
NF1-220ENST00000581113 MUC3BQ9H195 1237 aa7.65□□□□□ -1.18
NF1-220ENST00000581113 RNF19AQ9NV58 838 aa7.65□□□□□ -1.18
NF1-220ENST00000581113 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.18
NF1-220ENST00000581113 SOX13Q9UN79 622 aa7.65□□□□□ -1.18
NF1-220ENST00000581113 COL8A1P27658 744 aa7.64□□□□□ -1.19
NF1-220ENST00000581113 PRPF40BQ6NWY9 871 aaKnown RBP7.64□□□□□ -1.19
NF1-220ENST00000581113 FAM117BQ6P1L5 589 aa7.64□□□□□ -1.19
NF1-220ENST00000581113 ABCB6Q9NP58 842 aa7.64□□□□□ -1.19
NF1-220ENST00000581113 PARP2Q9UGN5 583 aa7.64□□□□□ -1.19
NF1-220ENST00000581113 TMEM238LA0A1B0GVL6 79 aa7.63□□□□□ -1.19
NF1-220ENST00000581113 H3BRJ5 948 aa7.63□□□□□ -1.19
NF1-220ENST00000581113 GNA15P30679 374 aa7.63□□□□□ -1.19
NF1-220ENST00000581113 FCGRTP55899 365 aa7.63□□□□□ -1.19
NF1-220ENST00000581113 XPCQ01831 940 aaPredicted RBP7.63□□□□□ -1.19
NF1-220ENST00000581113 VN1R5Q7Z5H4 357 aa7.63□□□□□ -1.19
NF1-220ENST00000581113 GLIS3Q8NEA6 775 aa7.63□□□□□ -1.19
NF1-220ENST00000581113 OSBPL7Q9BZF2 842 aa7.63□□□□□ -1.19
NF1-220ENST00000581113 IKBKEQ14164 716 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 ZNF326Q5BKZ1 582 aaKnown RBP7.62□□□□□ -1.19
NF1-220ENST00000581113 DTHD1Q6ZMT9 781 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 ILDR2Q71H61 639 aa7.62□□□□□ -1.19
NF1-220ENST00000581113 FMR1NBQ8N0W7 255 aaPredicted RBP7.62□□□□□ -1.19
NF1-220ENST00000581113 DTWD1Q8N5C7 304 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms