RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-208ENST00000581057 STARD13Q9Y3M8 1113 aa11.28□□□□□ -0.6
TRAPPC8-208ENST00000581057 SMNDC1O75940 238 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRAPPC8-208ENST00000581057 DAB2P98082 770 aa11.27□□□□□ -0.61
TRAPPC8-208ENST00000581057 GRM2Q14416 872 aa11.27□□□□□ -0.61
TRAPPC8-208ENST00000581057 KIAA0319Q5VV43 1072 aa11.27□□□□□ -0.61
TRAPPC8-208ENST00000581057 GDF6Q6KF10 455 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC8-208ENST00000581057 CHSY3Q70JA7 882 aa11.27□□□□□ -0.61
TRAPPC8-208ENST00000581057 ASAP3Q8TDY4 903 aa11.27□□□□□ -0.61
TRAPPC8-208ENST00000581057 MRRFQ96E11 262 aaKnown RBP11.27□□□□□ -0.61
TRAPPC8-208ENST00000581057 BTBD6Q96KE9 485 aa11.27□□□□□ -0.61
TRAPPC8-208ENST00000581057 OSBPL7Q9BZF2 842 aa11.27□□□□□ -0.61
TRAPPC8-208ENST00000581057 PDE2AO00408 941 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC8-208ENST00000581057 ALBP02768 609 aa11.26□□□□□ -0.61
TRAPPC8-208ENST00000581057 C8orf86Q6ZUL3 223 aa11.26□□□□□ -0.61
TRAPPC8-208ENST00000581057 NPM2Q86SE8 214 aaKnown RBP11.26□□□□□ -0.61
TRAPPC8-208ENST00000581057 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
TRAPPC8-208ENST00000581057 LACRTQ9GZZ8 138 aa11.26□□□□□ -0.61
TRAPPC8-208ENST00000581057 VTI1BQ9UEU0 232 aa11.26□□□□□ -0.61
TRAPPC8-208ENST00000581057 METTL12A8MUP2 240 aa11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 M0R082 166 aa11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 SORBS3O60504 671 aa11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 ZNF385CQ66K41 422 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 TMC4Q7Z404 712 aa11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 ZNF417Q8TAU3 575 aa11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 FRMD6Q96NE9 622 aa11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 ZNF587Q96SQ5 575 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 POP1Q99575 1024 aaKnown RBP11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 PPP4R2Q9NY27 417 aa11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 FRRS1LQ9P0K9 344 aa11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 TRIM33Q9UPN9 1127 aa11.25□□□□□ -0.61
TRAPPC8-208ENST00000581057 NFKBIEO00221 500 aa11.24□□□□□ -0.61
TRAPPC8-208ENST00000581057 EIF4BP23588 611 aaKnown RBP11.24□□□□□ -0.61
TRAPPC8-208ENST00000581057 TMEM102Q8N9M5 508 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC8-208ENST00000581057 NXPE3Q969Y0 559 aa11.24□□□□□ -0.61
TRAPPC8-208ENST00000581057 TCF12Q99081 682 aa11.24□□□□□ -0.61
TRAPPC8-208ENST00000581057 C12orf49Q9H741 205 aa11.24□□□□□ -0.61
TRAPPC8-208ENST00000581057 RRAGCQ9HB90 399 aa11.24□□□□□ -0.61
TRAPPC8-208ENST00000581057 TRAK1Q9UPV9 953 aa11.24□□□□□ -0.61
TRAPPC8-208ENST00000581057 AK5Q9Y6K8 562 aa11.24□□□□□ -0.61
TRAPPC8-208ENST00000581057 FCGRTP55899 365 aa11.23□□□□□ -0.61
TRAPPC8-208ENST00000581057 SPRED3Q2MJR0 410 aa11.22□□□□□ -0.61
TRAPPC8-208ENST00000581057 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
TRAPPC8-208ENST00000581057 CCNJLQ8IV13 435 aa11.22□□□□□ -0.61
TRAPPC8-208ENST00000581057 ENAMQ9NRM1 1142 aa11.22□□□□□ -0.61
TRAPPC8-208ENST00000581057 FAM177BA6PVY3 158 aa11.21□□□□□ -0.61
TRAPPC8-208ENST00000581057 GIPC1O14908 333 aa11.21□□□□□ -0.61
TRAPPC8-208ENST00000581057 LILRB5O75023 590 aa11.21□□□□□ -0.61
TRAPPC8-208ENST00000581057 GRIA4P48058 902 aa11.21□□□□□ -0.61
TRAPPC8-208ENST00000581057 C20orf204Q6ZNR8 217 aa11.21□□□□□ -0.61
TRAPPC8-208ENST00000581057 GLIS3Q8NEA6 775 aa11.21□□□□□ -0.61
TRAPPC8-208ENST00000581057 LRRC4BQ9NT99 713 aa11.21□□□□□ -0.61
TRAPPC8-208ENST00000581057 KIAA1522Q9P206 1035 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC8-208ENST00000581057 CDC25BP30305 580 aa11.2□□□□□ -0.62
TRAPPC8-208ENST00000581057 ITGAEP38570 1179 aa11.2□□□□□ -0.62
TRAPPC8-208ENST00000581057 TSNAXIP1Q2TAA8 658 aa11.2□□□□□ -0.62
TRAPPC8-208ENST00000581057 ADAMTSL4Q6UY14 1074 aa11.2□□□□□ -0.62
TRAPPC8-208ENST00000581057 DTHD1Q6ZMT9 781 aa11.2□□□□□ -0.62
TRAPPC8-208ENST00000581057 ABCB6Q9NP58 842 aa11.2□□□□□ -0.62
TRAPPC8-208ENST00000581057 A0A096LPE4 126 aa11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 TMEM238LA0A1B0GVL6 79 aa11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 A0A1W2PPZ6 126 aa11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 E9PSI1 815 aa11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 WIPF1O43516 503 aa11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 USP17L7P0C7H9 530 aa11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 PTPRAP18433 802 aa11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 SRCIN1Q9C0H9 1055 aa11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 BHLHE41Q9C0J9 482 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 SH2B1Q9NRF2 756 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 FAM8A1Q9UBU6 413 aa11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 AKAP2Q9Y2D5 859 aa11.19□□□□□ -0.62
TRAPPC8-208ENST00000581057 AFF1P51825 1210 aaKnown RBP11.18□□□□□ -0.62
TRAPPC8-208ENST00000581057 MRPL58Q14197 206 aaKnown RBP11.18□□□□□ -0.62
TRAPPC8-208ENST00000581057 PRPF40BQ6NWY9 871 aaKnown RBP11.18□□□□□ -0.62
TRAPPC8-208ENST00000581057 IL22RA1Q8N6P7 574 aa11.18□□□□□ -0.62
TRAPPC8-208ENST00000581057 TTC9Q92623 222 aa11.18□□□□□ -0.62
TRAPPC8-208ENST00000581057 MUC3BQ9H195 1237 aa11.18□□□□□ -0.62
TRAPPC8-208ENST00000581057 CDC27P30260 824 aa11.17□□□□□ -0.62
TRAPPC8-208ENST00000581057 GSTT1P30711 240 aa11.17□□□□□ -0.62
TRAPPC8-208ENST00000581057 GRIK5Q16478 980 aa11.17□□□□□ -0.62
TRAPPC8-208ENST00000581057 BSNDQ8WZ55 320 aa11.17□□□□□ -0.62
TRAPPC8-208ENST00000581057 ZSCAN1Q8NBB4 408 aa11.16□□□□□ -0.62
TRAPPC8-208ENST00000581057 CTSHP09668 335 aa11.15□□□□□ -0.62
TRAPPC8-208ENST00000581057 WFDC8Q8IUA0 241 aa11.15□□□□□ -0.62
TRAPPC8-208ENST00000581057 TMEM87AQ8NBN3 555 aa11.15□□□□□ -0.62
TRAPPC8-208ENST00000581057 BACH2Q9BYV9 841 aa11.15□□□□□ -0.62
TRAPPC8-208ENST00000581057 TXNDC11Q6PKC3 985 aa11.14□□□□□ -0.63
TRAPPC8-208ENST00000581057 ADAM19Q9H013 955 aa11.14□□□□□ -0.63
TRAPPC8-208ENST00000581057 TTF2Q9UNY4 1162 aaKnown RBP11.14□□□□□ -0.63
TRAPPC8-208ENST00000581057 ARHGEF15O94989 841 aa11.13□□□□□ -0.63
TRAPPC8-208ENST00000581057 EPHA1P21709 976 aa11.13□□□□□ -0.63
TRAPPC8-208ENST00000581057 DGKGP49619 791 aa11.13□□□□□ -0.63
TRAPPC8-208ENST00000581057 CABP4P57796 275 aa11.13□□□□□ -0.63
TRAPPC8-208ENST00000581057 MEI1Q5TIA1 1274 aa11.13□□□□□ -0.63
TRAPPC8-208ENST00000581057 DMRTC2Q8IXT2 367 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC8-208ENST00000581057 CRELD1Q96HD1 420 aa11.13□□□□□ -0.63
TRAPPC8-208ENST00000581057 SOX13Q9UN79 622 aa11.13□□□□□ -0.63
TRAPPC8-208ENST00000581057 LINC01387J3KSC0 135 aa11.12□□□□□ -0.63
TRAPPC8-208ENST00000581057 FBXO24O75426 580 aa11.12□□□□□ -0.63
TRAPPC8-208ENST00000581057 RECKO95980 971 aa11.12□□□□□ -0.63
TRAPPC8-208ENST00000581057 XRCC5P13010 732 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms