RNA–Protein interactions for RNA: ENST00000580838.1

PTPRM-212, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-212ENST00000580838 TSPY4P0CV99 314 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 TSPY10P0CW01 314 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 GRIK5Q16478 980 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 RTN1Q16799 776 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 MSL1Q68DK7 614 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 FAM35AQ86V20 835 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 CCDC136Q96JN2 1154 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 BCL11AQ9H165 835 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 MYBBP1AQ9BQG0 1328 aaKnown RBP7.67□□□□□ -1.18
PTPRM-212ENST00000580838 PTPRGP23470 1445 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 NUP160Q12769 1436 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 PRG4Q92954 1404 aaPredicted RBP7.67□□□□□ -1.18
PTPRM-212ENST00000580838 CEP170Q5SW79 1584 aa7.67□□□□□ -1.18
PTPRM-212ENST00000580838 PLEKHD1A6NEE1 506 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 CPB1P15086 417 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 RASA1P20936 1047 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 SEC13P55735 322 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 IRX6P78412 446 aaPredicted RBP7.66□□□□□ -1.18
PTPRM-212ENST00000580838 PLAURQ03405 335 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 FBXO11Q86XK2 927 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 WFDC12Q8WWY7 111 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 LPIN3Q9BQK8 851 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 ZFATQ9P243 1243 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 LRPPRCP42704 1394 aaKnown RBP7.66□□□□□ -1.18
PTPRM-212ENST00000580838 PLEKHH2Q8IVE3 1493 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 ABCA8O94911 1581 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 LAMC1P11047 1609 aa7.66□□□□□ -1.18
PTPRM-212ENST00000580838 ZBTB42B2RXF5 422 aa7.65□□□□□ -1.18
PTPRM-212ENST00000580838 LGR5O75473 907 aa7.65□□□□□ -1.18
PTPRM-212ENST00000580838 NUP155O75694 1391 aa7.65□□□□□ -1.18
PTPRM-212ENST00000580838 MAP3K6O95382 1288 aa7.65□□□□□ -1.18
PTPRM-212ENST00000580838 IREB2P48200 963 aaKnown RBP7.65□□□□□ -1.18
PTPRM-212ENST00000580838 ABCC10Q5T3U5 1492 aa7.65□□□□□ -1.18
PTPRM-212ENST00000580838 DTWD1Q8N5C7 304 aa7.65□□□□□ -1.18
PTPRM-212ENST00000580838 CARD11Q9BXL7 1154 aa7.65□□□□□ -1.18
PTPRM-212ENST00000580838 ZNF644Q9H582 1327 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-212ENST00000580838 EIF2AK4Q9P2K8 1649 aaKnown RBP7.65□□□□□ -1.18
PTPRM-212ENST00000580838 ZNF608Q9ULD9 1512 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-212ENST00000580838 NOP58Q9Y2X3 529 aaKnown RBP7.65□□□□□ -1.18
PTPRM-212ENST00000580838 BCORL1Q5H9F3 1711 aa7.64□□□□□ -1.19
PTPRM-212ENST00000580838 CCDC141Q6ZP82 1450 aa7.64□□□□□ -1.19
PTPRM-212ENST00000580838 NOS3P29474 1203 aa7.64□□□□□ -1.19
PTPRM-212ENST00000580838 INPP5BP32019 993 aa7.64□□□□□ -1.19
PTPRM-212ENST00000580838 CCDC184Q52MB2 194 aa7.64□□□□□ -1.19
PTPRM-212ENST00000580838 PERM1Q5SV97 790 aa7.64□□□□□ -1.19
PTPRM-212ENST00000580838 B4GALNT3Q6L9W6 998 aa7.64□□□□□ -1.19
PTPRM-212ENST00000580838 NLRP13Q86W25 1043 aa7.64□□□□□ -1.19
PTPRM-212ENST00000580838 PNISRQ8TF01 805 aaKnown RBP7.64□□□□□ -1.19
PTPRM-212ENST00000580838 FRRS1LQ9P0K9 344 aa7.64□□□□□ -1.19
PTPRM-212ENST00000580838 TFIP11Q9UBB9 837 aaKnown RBP7.64□□□□□ -1.19
PTPRM-212ENST00000580838 CDC42BPAQ5VT25 1732 aa7.64□□□□□ -1.19
PTPRM-212ENST00000580838 E9PCH4 1651 aa7.63□□□□□ -1.19
PTPRM-212ENST00000580838 MAST1Q9Y2H9 1570 aa7.63□□□□□ -1.19
PTPRM-212ENST00000580838 PLB1Q6P1J6 1458 aa7.63□□□□□ -1.19
PTPRM-212ENST00000580838 TCERG1O14776 1098 aaKnown RBP7.63□□□□□ -1.19
PTPRM-212ENST00000580838 PCSK7Q16549 785 aa7.63□□□□□ -1.19
PTPRM-212ENST00000580838 LCE3BQ5TA77 95 aa7.63□□□□□ -1.19
PTPRM-212ENST00000580838 KRT25Q7Z3Z0 450 aa7.63□□□□□ -1.19
PTPRM-212ENST00000580838 TRPM4Q8TD43 1214 aa7.63□□□□□ -1.19
PTPRM-212ENST00000580838 HINFPQ9BQA5 517 aa7.63□□□□□ -1.19
PTPRM-212ENST00000580838 KLK14Q9P0G3 267 aa7.63□□□□□ -1.19
PTPRM-212ENST00000580838 MAFBQ9Y5Q3 323 aaPredicted RBP7.63□□□□□ -1.19
PTPRM-212ENST00000580838 GPRASP1Q5JY77 1395 aa7.62□□□□□ -1.19
PTPRM-212ENST00000580838 IGFBP4P22692 258 aa7.62□□□□□ -1.19
PTPRM-212ENST00000580838 TARSP26639 723 aaKnown RBP7.62□□□□□ -1.19
PTPRM-212ENST00000580838 IDH3AP50213 366 aa7.62□□□□□ -1.19
PTPRM-212ENST00000580838 MLLT1Q03111 559 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-212ENST00000580838 FLIIQ13045 1269 aa7.62□□□□□ -1.19
PTPRM-212ENST00000580838 DHX32Q7L7V1 743 aaKnown RBP7.62□□□□□ -1.19
PTPRM-212ENST00000580838 IFT43Q96FT9 208 aa7.62□□□□□ -1.19
PTPRM-212ENST00000580838 MEGF10Q96KG7 1140 aa7.62□□□□□ -1.19
PTPRM-212ENST00000580838 CCDC144AA2RUR9 1427 aa7.61□□□□□ -1.19
PTPRM-212ENST00000580838 ARID3CA6NKF2 412 aa7.61□□□□□ -1.19
PTPRM-212ENST00000580838 DEAF1O75398 565 aaPredicted RBP7.61□□□□□ -1.19
PTPRM-212ENST00000580838 EPB42P16452 691 aa7.61□□□□□ -1.19
PTPRM-212ENST00000580838 CRTC2Q53ET0 693 aaPredicted RBP7.61□□□□□ -1.19
PTPRM-212ENST00000580838 ZNF326Q5BKZ1 582 aaKnown RBP7.61□□□□□ -1.19
PTPRM-212ENST00000580838 ELMSAN1Q6PJG2 1045 aa7.61□□□□□ -1.19
PTPRM-212ENST00000580838 WFDC8Q8IUA0 241 aa7.61□□□□□ -1.19
PTPRM-212ENST00000580838 TTC9Q92623 222 aa7.61□□□□□ -1.19
PTPRM-212ENST00000580838 IPO9Q96P70 1041 aaKnown RBP7.61□□□□□ -1.19
PTPRM-212ENST00000580838 ZNF777Q9ULD5 760 aaPredicted RBP7.61□□□□□ -1.19
PTPRM-212ENST00000580838 RNF112Q9ULX5 631 aa7.61□□□□□ -1.19
PTPRM-212ENST00000580838 UNC13BO14795 1591 aa7.61□□□□□ -1.19
PTPRM-212ENST00000580838 ERCC6Q03468 1493 aa7.61□□□□□ -1.19
PTPRM-212ENST00000580838 PARD3Q8TEW0 1356 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 PREX2Q70Z35 1606 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 SASH3O75995 380 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 RRP1P56182 461 aaKnown RBP7.6□□□□□ -1.19
PTPRM-212ENST00000580838 GPLD1P80108 840 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 DPYDQ12882 1025 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 PTK7Q13308 1070 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 LARP1Q6PKG0 1096 aaKnown RBP7.6□□□□□ -1.19
PTPRM-212ENST00000580838 IGF2-ASQ6U949 168 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 POLR3GLQ9BT43 218 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 FAM135AQ9P2D6 1515 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 ATP10BO94823 1461 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 PRAG1Q86YV5 1406 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 TRPM1Q7Z4N2 1603 aa7.6□□□□□ -1.19
PTPRM-212ENST00000580838 PLXNC1O60486 1568 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms