RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 DCAF8Q5TAQ9 597 aa19.15■□□□□ 0.66
SS18-216ENST00000580751 LPIN2Q92539 896 aa19.15■□□□□ 0.66
SS18-216ENST00000580751 EXOC6BQ9Y2D4 811 aa19.15■□□□□ 0.66
SS18-216ENST00000580751 AKAP2Q9Y2D5 859 aa19.15■□□□□ 0.66
SS18-216ENST00000580751 SNAP23O00161 211 aa19.14■□□□□ 0.65
SS18-216ENST00000580751 IFIT1P09914 478 aaKnown RBP19.14■□□□□ 0.65
SS18-216ENST00000580751 SLC5A1P13866 664 aa19.14■□□□□ 0.65
SS18-216ENST00000580751 TFCP2Q12800 502 aa19.14■□□□□ 0.65
SS18-216ENST00000580751 ATP2B3Q16720 1220 aa19.14■□□□□ 0.65
SS18-216ENST00000580751 B4GALNT3Q6L9W6 998 aa19.14■□□□□ 0.65
SS18-216ENST00000580751 ZNRF3Q9ULT6 936 aa19.14■□□□□ 0.65
SS18-216ENST00000580751 IRS2Q9Y4H2 1338 aa19.14■□□□□ 0.65
SS18-216ENST00000580751 FZD9O00144 591 aa19.13■□□□□ 0.65
SS18-216ENST00000580751 FGFR2P21802 821 aa19.13■□□□□ 0.65
SS18-216ENST00000580751 KLRK1P26718 216 aa19.13■□□□□ 0.65
SS18-216ENST00000580751 ZNF804AQ7Z570 1209 aa19.13■□□□□ 0.65
SS18-216ENST00000580751 COA1Q9GZY4 146 aa19.13■□□□□ 0.65
SS18-216ENST00000580751 DBNDD1Q9H9R9 158 aa19.13■□□□□ 0.65
SS18-216ENST00000580751 KDM2BQ8NHM5 1336 aa19.12■□□□□ 0.65
SS18-216ENST00000580751 ECE2O60344 883 aa19.12■□□□□ 0.65
SS18-216ENST00000580751 RAB11FIP3O75154 756 aa19.12■□□□□ 0.65
SS18-216ENST00000580751 SASH1O94885 1247 aa19.12■□□□□ 0.65
SS18-216ENST00000580751 EIF6P56537 245 aaKnown RBP19.12■□□□□ 0.65
SS18-216ENST00000580751 DOK7Q18PE1 504 aa19.12■□□□□ 0.65
SS18-216ENST00000580751 TXNRD3Q86VQ6 643 aa19.12■□□□□ 0.65
SS18-216ENST00000580751 ZNF609O15014 1411 aa19.11■□□□□ 0.65
SS18-216ENST00000580751 CAVIN4Q5BKX8 364 aa19.11■□□□□ 0.65
SS18-216ENST00000580751 PODNQ7Z5L7 613 aa19.11■□□□□ 0.65
SS18-216ENST00000580751 GPR108Q9NPR9 543 aa19.11■□□□□ 0.65
SS18-216ENST00000580751 ARAP2Q8WZ64 1704 aa19.11■□□□□ 0.65
SS18-216ENST00000580751 A0A1B0GUL7 405 aa19.1■□□□□ 0.65
SS18-216ENST00000580751 DPY19L2Q6NUT2 758 aa19.1■□□□□ 0.65
SS18-216ENST00000580751 VPS37DQ86XT2 251 aa19.1■□□□□ 0.65
SS18-216ENST00000580751 KIF1BPQ96EK5 621 aa19.1■□□□□ 0.65
SS18-216ENST00000580751 DCTPP1Q9H773 170 aa19.1■□□□□ 0.65
SS18-216ENST00000580751 ZNF541Q9H0D2 1346 aa19.09■□□□□ 0.65
SS18-216ENST00000580751 YY1P25490 414 aa19.09■□□□□ 0.65
SS18-216ENST00000580751 HIBADHP31937 336 aaKnown RBP19.09■□□□□ 0.65
SS18-216ENST00000580751 GYG1P46976 350 aa19.09■□□□□ 0.65
SS18-216ENST00000580751 RHPN1Q8TCX5 695 aa19.09■□□□□ 0.65
SS18-216ENST00000580751 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
SS18-216ENST00000580751 CD209Q9NNX6 404 aa19.09■□□□□ 0.65
SS18-216ENST00000580751 YDJCA8MPS7 323 aa19.08■□□□□ 0.64
SS18-216ENST00000580751 TNIP1Q15025 636 aa19.08■□□□□ 0.64
SS18-216ENST00000580751 TNNI3KQ59H18 835 aa19.08■□□□□ 0.64
SS18-216ENST00000580751 FAM84BQ96KN1 310 aaPredicted RBP19.08■□□□□ 0.64
SS18-216ENST00000580751 FPGT-TNNI3KV9GXZ4 949 aa19.08■□□□□ 0.64
SS18-216ENST00000580751 GLTPD2A6NH11 291 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 APBB1O00213 710 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 IL1R1P14778 569 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 TIMM10P62072 90 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 CXCL9Q07325 125 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 CIAPIN1Q6FI81 312 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 FBXO33Q7Z6M2 555 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 SMC5Q8IY18 1101 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 GPC2Q8N158 579 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 NEUROD6Q96NK8 337 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 LRRCC1Q9C099 1032 aa19.07■□□□□ 0.64
SS18-216ENST00000580751 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.07■□□□□ 0.64
SS18-216ENST00000580751 RAD17O75943 681 aa19.06■□□□□ 0.64
SS18-216ENST00000580751 IGHDP01880 384 aa19.06■□□□□ 0.64
SS18-216ENST00000580751 CLASRPQ8N2M8 674 aaKnown RBP19.06■□□□□ 0.64
SS18-216ENST00000580751 XAGE2Q96GT9 111 aa19.06■□□□□ 0.64
SS18-216ENST00000580751 GNL3LQ9NVN8 582 aaKnown RBP19.06■□□□□ 0.64
SS18-216ENST00000580751 PSME4Q14997 1843 aa19.06■□□□□ 0.64
SS18-216ENST00000580751 SCN9AQ15858 1988 aa19.06■□□□□ 0.64
SS18-216ENST00000580751 USP17L3A6NCW0 530 aa19.05■□□□□ 0.64
SS18-216ENST00000580751 USP17L4A6NCW7 530 aa19.05■□□□□ 0.64
SS18-216ENST00000580751 BCAMP50895 628 aa19.05■□□□□ 0.64
SS18-216ENST00000580751 GORABQ5T7V8 394 aa19.05■□□□□ 0.64
SS18-216ENST00000580751 USP17L1Q7RTZ2 530 aa19.05■□□□□ 0.64
SS18-216ENST00000580751 TDRD7Q8NHU6 1098 aaKnown RBP19.05■□□□□ 0.64
SS18-216ENST00000580751 IL1RAPL2Q9NP60 686 aa19.05■□□□□ 0.64
SS18-216ENST00000580751 GJA3Q9Y6H8 435 aa19.05■□□□□ 0.64
SS18-216ENST00000580751 ADORA1P30542 326 aa19.04■□□□□ 0.64
SS18-216ENST00000580751 STRIP1Q5VSL9 837 aa19.04■□□□□ 0.64
SS18-216ENST00000580751 AACSQ86V21 672 aa19.04■□□□□ 0.64
SS18-216ENST00000580751 PSMD14O00487 310 aa19.03■□□□□ 0.64
SS18-216ENST00000580751 SEMA3EO15041 775 aa19.03■□□□□ 0.64
SS18-216ENST00000580751 FRAT2O75474 233 aaPredicted RBP19.03■□□□□ 0.64
SS18-216ENST00000580751 DDNO94850 711 aaPredicted RBP19.03■□□□□ 0.64
SS18-216ENST00000580751 CCDC102BQ68D86 513 aa19.03■□□□□ 0.64
SS18-216ENST00000580751 EAF2Q96CJ1 260 aaPredicted RBP19.03■□□□□ 0.64
SS18-216ENST00000580751 ZBTB22O15209 634 aa19.02■□□□□ 0.64
SS18-216ENST00000580751 TTLL5Q6EMB2 1281 aa19.02■□□□□ 0.64
SS18-216ENST00000580751 FBXW7Q969H0 707 aa19.02■□□□□ 0.64
SS18-216ENST00000580751 L3MBTL3Q96JM7 780 aaPredicted RBP19.02■□□□□ 0.64
SS18-216ENST00000580751 DBNDD2Q9BQY9 259 aa19.02■□□□□ 0.64
SS18-216ENST00000580751 KCNQ5Q9NR82 932 aa19.02■□□□□ 0.64
SS18-216ENST00000580751 ZBTB47Q9UFB7 747 aaPredicted RBP19.02■□□□□ 0.64
SS18-216ENST00000580751 DBNLQ9UJU6 430 aaKnown RBP19.02■□□□□ 0.64
SS18-216ENST00000580751 WDR90Q96KV7 1748 aa19.02■□□□□ 0.63
SS18-216ENST00000580751 FAM205AQ6ZU69 1335 aa19.01■□□□□ 0.63
SS18-216ENST00000580751 MYO3BQ8WXR4 1341 aa19.01■□□□□ 0.63
SS18-216ENST00000580751 VIL1P09327 827 aaKnown RBP19.01■□□□□ 0.63
SS18-216ENST00000580751 IFIT2P09913 472 aaKnown RBP19.01■□□□□ 0.63
SS18-216ENST00000580751 RPS12P25398 132 aaKnown RBP19.01■□□□□ 0.63
SS18-216ENST00000580751 PHKA1P46020 1223 aa19.01■□□□□ 0.63
SS18-216ENST00000580751 GTF2IP78347 998 aa19.01■□□□□ 0.63
SS18-216ENST00000580751 CCDC158Q5M9N0 1113 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms