RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 ITGA6P23229 1130 aa31.37■■■□□ 2.61
CDC42EP4-205ENST00000580315 IGHMBP2P38935 993 aaKnown RBP31.37■■■□□ 2.61
CDC42EP4-205ENST00000580315 DCPSQ96C86 337 aaKnown RBP31.37■■■□□ 2.61
CDC42EP4-205ENST00000580315 UFL1O94874 794 aa31.36■■■□□ 2.61
CDC42EP4-205ENST00000580315 FAM161AQ3B820 660 aa31.36■■■□□ 2.61
CDC42EP4-205ENST00000580315 GGA1Q9UJY5 639 aa31.36■■■□□ 2.61
CDC42EP4-205ENST00000580315 XDHP47989 1333 aa31.35■■■□□ 2.61
CDC42EP4-205ENST00000580315 CCDC85CA6NKD9 419 aa31.35■■■□□ 2.61
CDC42EP4-205ENST00000580315 ADM5C9JUS6 153 aa31.35■■■□□ 2.61
CDC42EP4-205ENST00000580315 GBA2Q9HCG7 927 aaPredicted RBP31.35■■■□□ 2.61
CDC42EP4-205ENST00000580315 ANKRD18BA2A2Z9 1011 aa31.34■■■□□ 2.61
CDC42EP4-205ENST00000580315 FOXO4P98177 505 aa31.34■■■□□ 2.61
CDC42EP4-205ENST00000580315 KIF4BQ2VIQ3 1234 aa31.34■■■□□ 2.61
CDC42EP4-205ENST00000580315 CHMP3Q9Y3E7 222 aa31.34■■■□□ 2.61
CDC42EP4-205ENST00000580315 G3V3G9 751 aa31.33■■■□□ 2.61
CDC42EP4-205ENST00000580315 RARSP54136 660 aaKnown RBP31.33■■■□□ 2.61
CDC42EP4-205ENST00000580315 DCAF8Q5TAQ9 597 aa31.33■■■□□ 2.61
CDC42EP4-205ENST00000580315 C2orf69Q8N8R5 385 aa31.33■■■□□ 2.61
CDC42EP4-205ENST00000580315 MPHOSPH8Q99549 860 aa31.33■■■□□ 2.61
CDC42EP4-205ENST00000580315 MYH3P11055 1940 aa31.33■■■□□ 2.61
CDC42EP4-205ENST00000580315 IFIT5Q13325 482 aaKnown RBP31.32■■■□□ 2.6
CDC42EP4-205ENST00000580315 RGMBQ6NW40 437 aa31.32■■■□□ 2.6
CDC42EP4-205ENST00000580315 NOB1Q9ULX3 412 aaKnown RBP31.32■■■□□ 2.6
CDC42EP4-205ENST00000580315 SCN9AQ15858 1988 aa31.31■■■□□ 2.6
CDC42EP4-205ENST00000580315 FAM155AB1AL88 458 aaPredicted RBP31.31■■■□□ 2.6
CDC42EP4-205ENST00000580315 LMBR1LQ6UX01 489 aa31.31■■■□□ 2.6
CDC42EP4-205ENST00000580315 API5Q9BZZ5 524 aaKnown RBP31.31■■■□□ 2.6
CDC42EP4-205ENST00000580315 MINPP1Q9UNW1 487 aa31.31■■■□□ 2.6
CDC42EP4-205ENST00000580315 UTYO14607 1347 aa31.3■■■□□ 2.6
CDC42EP4-205ENST00000580315 ATP2B4P23634 1241 aa31.3■■■□□ 2.6
CDC42EP4-205ENST00000580315 MCOLN1Q9GZU1 580 aa31.3■■■□□ 2.6
CDC42EP4-205ENST00000580315 GGA3Q9NZ52 723 aa31.3■■■□□ 2.6
CDC42EP4-205ENST00000580315 ASTN2O75129 1339 aaPredicted RBP31.29■■■□□ 2.6
CDC42EP4-205ENST00000580315 ZBED9Q6R2W3 1325 aa31.29■■■□□ 2.6
CDC42EP4-205ENST00000580315 KIF16BQ96L93 1317 aa31.29■■■□□ 2.6
CDC42EP4-205ENST00000580315 SULF1Q8IWU6 871 aa31.29■■■□□ 2.6
CDC42EP4-205ENST00000580315 POLR2AP24928 1970 aaKnown RBP31.28■■■□□ 2.6
CDC42EP4-205ENST00000580315 NBPF7P0C2Y1 421 aaPredicted RBP31.28■■■□□ 2.6
CDC42EP4-205ENST00000580315 ZNF280AP59817 542 aaPredicted RBP31.28■■■□□ 2.6
CDC42EP4-205ENST00000580315 CCDC57Q2TAC2 916 aa31.28■■■□□ 2.6
CDC42EP4-205ENST00000580315 EPHA10Q5JZY3 1008 aa31.28■■■□□ 2.6
CDC42EP4-205ENST00000580315 AGBL3Q8NEM8 1001 aa31.28■■■□□ 2.6
CDC42EP4-205ENST00000580315 CCDC102AQ96A19 550 aa31.28■■■□□ 2.6
CDC42EP4-205ENST00000580315 CCT4P50991 539 aaKnown RBP31.27■■■□□ 2.6
CDC42EP4-205ENST00000580315 RSBN1LQ6PCB5 846 aaPredicted RBP31.27■■■□□ 2.6
CDC42EP4-205ENST00000580315 SUCLG2Q96I99 432 aa31.27■■■□□ 2.6
CDC42EP4-205ENST00000580315 ANKRD2Q9GZV1 360 aa31.27■■■□□ 2.6
CDC42EP4-205ENST00000580315 CASP8AP2Q9UKL3 1982 aa31.26■■■□□ 2.6
CDC42EP4-205ENST00000580315 ZNF609O15014 1411 aa31.26■■■□□ 2.6
CDC42EP4-205ENST00000580315 ZNF157P51786 506 aaPredicted RBP31.26■■■□□ 2.59
CDC42EP4-205ENST00000580315 RGS19P49795 217 aa31.25■■■□□ 2.59
CDC42EP4-205ENST00000580315 TAF7LQ5H9L4 462 aa31.25■■■□□ 2.59
CDC42EP4-205ENST00000580315 KIF23Q02241 960 aaPredicted RBP31.24■■■□□ 2.59
CDC42EP4-205ENST00000580315 SCARF1Q14162 830 aa31.24■■■□□ 2.59
CDC42EP4-205ENST00000580315 ARHGAP45Q92619 1136 aa31.24■■■□□ 2.59
CDC42EP4-205ENST00000580315 CDCA5Q96FF9 252 aa31.24■■■□□ 2.59
CDC42EP4-205ENST00000580315 GMLQ99445 158 aa31.24■■■□□ 2.59
CDC42EP4-205ENST00000580315 DGKZQ13574 1117 aa31.23■■■□□ 2.59
CDC42EP4-205ENST00000580315 ANGEL2Q5VTE6 544 aaKnown RBP31.23■■■□□ 2.59
CDC42EP4-205ENST00000580315 LEMD3Q9Y2U8 911 aa31.23■■■□□ 2.59
CDC42EP4-205ENST00000580315 IPO8O15397 1037 aaKnown RBP31.22■■■□□ 2.59
CDC42EP4-205ENST00000580315 MLLT1Q03111 559 aaPredicted RBP31.22■■■□□ 2.59
CDC42EP4-205ENST00000580315 USP44Q9H0E7 712 aa31.22■■■□□ 2.59
CDC42EP4-205ENST00000580315 WTIPA6NIX2 430 aaPredicted RBP31.21■■■□□ 2.59
CDC42EP4-205ENST00000580315 USP17L8P0C7I0 530 aa31.21■■■□□ 2.59
CDC42EP4-205ENST00000580315 PODNQ7Z5L7 613 aa31.21■■■□□ 2.59
CDC42EP4-205ENST00000580315 KAZALD1Q96I82 304 aa31.21■■■□□ 2.59
CDC42EP4-205ENST00000580315 BICC1Q9H694 974 aaKnown RBP31.21■■■□□ 2.59
CDC42EP4-205ENST00000580315 SAGE1Q9NXZ1 904 aa31.21■■■□□ 2.59
CDC42EP4-205ENST00000580315 MED23Q9ULK4 1368 aa31.2■■■□□ 2.59
CDC42EP4-205ENST00000580315 USP17L3A6NCW0 530 aa31.2■■■□□ 2.59
CDC42EP4-205ENST00000580315 USP17L4A6NCW7 530 aa31.2■■■□□ 2.59
CDC42EP4-205ENST00000580315 CHRNDQ07001 517 aa31.2■■■□□ 2.59
CDC42EP4-205ENST00000580315 USP17L1Q7RTZ2 530 aa31.2■■■□□ 2.59
CDC42EP4-205ENST00000580315 MYOZ2Q9NPC6 264 aa31.2■■■□□ 2.59
CDC42EP4-205ENST00000580315 SLC10A3P09131 477 aa31.19■■■□□ 2.58
CDC42EP4-205ENST00000580315 KCNJ4P48050 445 aa31.19■■■□□ 2.58
CDC42EP4-205ENST00000580315 LDHAL6AQ6ZMR3 332 aa31.19■■■□□ 2.58
CDC42EP4-205ENST00000580315 RABL6Q3YEC7 729 aaPredicted RBP31.18■■■□□ 2.58
CDC42EP4-205ENST00000580315 CNNM1Q9NRU3 951 aa31.18■■■□□ 2.58
CDC42EP4-205ENST00000580315 RNF186Q9NXI6 227 aa31.18■■■□□ 2.58
CDC42EP4-205ENST00000580315 ZNF804BA4D1E1 1349 aa31.18■■■□□ 2.58
CDC42EP4-205ENST00000580315 ZNF594Q96JF6 807 aaPredicted RBP31.17■■■□□ 2.58
CDC42EP4-205ENST00000580315 SPEF2Q9C093 1822 aa31.17■■■□□ 2.58
CDC42EP4-205ENST00000580315 TRPA1O75762 1119 aa31.16■■■□□ 2.58
CDC42EP4-205ENST00000580315 BCAR3O75815 825 aa31.16■■■□□ 2.58
CDC42EP4-205ENST00000580315 FRAT1Q92837 279 aaPredicted RBP31.16■■■□□ 2.58
CDC42EP4-205ENST00000580315 CSRNP1Q96S65 589 aa31.16■■■□□ 2.58
CDC42EP4-205ENST00000580315 HDAC5Q9UQL6 1122 aa31.16■■■□□ 2.58
CDC42EP4-205ENST00000580315 PITPNM2Q9BZ72 1349 aa31.16■■■□□ 2.58
CDC42EP4-205ENST00000580315 PSME4Q14997 1843 aa31.15■■■□□ 2.58
CDC42EP4-205ENST00000580315 UBTFL1P0CB47 393 aaPredicted RBP31.15■■■□□ 2.58
CDC42EP4-205ENST00000580315 ANKRD44Q8N8A2 993 aa31.15■■■□□ 2.58
CDC42EP4-205ENST00000580315 FKBP1BP68106 108 aa31.14■■■□□ 2.58
CDC42EP4-205ENST00000580315 ATF7IPQ6VMQ6 1270 aa31.13■■■□□ 2.57
CDC42EP4-205ENST00000580315 TAF5LO75529 589 aa31.12■■■□□ 2.57
CDC42EP4-205ENST00000580315 INTS3Q68E01 1043 aaKnown RBP31.12■■■□□ 2.57
CDC42EP4-205ENST00000580315 RASAL3Q86YV0 1011 aa31.12■■■□□ 2.57
CDC42EP4-205ENST00000580315 HELBQ8NG08 1087 aaPredicted RBP31.12■■■□□ 2.57
CDC42EP4-205ENST00000580315 COA1Q9GZY4 146 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms