RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 CCDC146Q8IYE0 955 aa25.03■■□□□ 1.6
LIMD2-209ENST00000580222 TRIM17Q9Y577 477 aa25.03■■□□□ 1.6
LIMD2-209ENST00000580222 DACT2Q5SW24 774 aa25.02■■□□□ 1.6
LIMD2-209ENST00000580222 ZBTB38Q8NAP3 1195 aaPredicted RBP25.02■■□□□ 1.6
LIMD2-209ENST00000580222 SASH1O94885 1247 aa25.01■■□□□ 1.59
LIMD2-209ENST00000580222 EN2P19622 333 aaPredicted RBP25.01■■□□□ 1.59
LIMD2-209ENST00000580222 PODNQ7Z5L7 613 aa25.01■■□□□ 1.59
LIMD2-209ENST00000580222 CAP1Q01518 475 aa25■■□□□ 1.59
LIMD2-209ENST00000580222 RUNDC1Q96C34 613 aa25■■□□□ 1.59
LIMD2-209ENST00000580222 DBF4Q9UBU7 674 aaPredicted RBP25■■□□□ 1.59
LIMD2-209ENST00000580222 LAS1LQ9Y4W2 734 aaKnown RBP25■■□□□ 1.59
LIMD2-209ENST00000580222 XDHP47989 1333 aa24.99■■□□□ 1.59
LIMD2-209ENST00000580222 SZT2Q5T011 3432 aa24.98■■□□□ 1.59
LIMD2-209ENST00000580222 IFNL1Q8IU54 200 aa24.98■■□□□ 1.59
LIMD2-209ENST00000580222 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.98■■□□□ 1.59
LIMD2-209ENST00000580222 IGF2BP3O00425 579 aaKnown RBP eCLIP24.97■■□□□ 1.59
LIMD2-209ENST00000580222 ATP2B4P23634 1241 aa24.97■■□□□ 1.59
LIMD2-209ENST00000580222 NEUROD2Q15784 382 aa24.97■■□□□ 1.59
LIMD2-209ENST00000580222 ANGEL1Q9UNK9 670 aaKnown RBP24.97■■□□□ 1.59
LIMD2-209ENST00000580222 NF2P35240 595 aa24.96■■□□□ 1.59
LIMD2-209ENST00000580222 CCDC152Q4G0S7 254 aa24.96■■□□□ 1.59
LIMD2-209ENST00000580222 INTS3Q68E01 1043 aaKnown RBP24.96■■□□□ 1.59
LIMD2-209ENST00000580222 ARMC9Q7Z3E5 817 aa24.96■■□□□ 1.59
LIMD2-209ENST00000580222 TXNRD3Q86VQ6 643 aa24.96■■□□□ 1.59
LIMD2-209ENST00000580222 CLMNQ96JQ2 1002 aa24.96■■□□□ 1.59
LIMD2-209ENST00000580222 HYPKQ9NX55 129 aa24.96■■□□□ 1.59
LIMD2-209ENST00000580222 TRIM35Q9UPQ4 493 aa24.96■■□□□ 1.59
LIMD2-209ENST00000580222 PHAXQ9H814 394 aaKnown RBP24.95■■□□□ 1.58
LIMD2-209ENST00000580222 COLQQ9Y215 455 aaPredicted RBP24.95■■□□□ 1.58
LIMD2-209ENST00000580222 PTPN22Q9Y2R2 807 aa24.95■■□□□ 1.58
LIMD2-209ENST00000580222 PDE8AO60658 829 aa24.94■■□□□ 1.58
LIMD2-209ENST00000580222 RIC3Q7Z5B4 369 aa24.94■■□□□ 1.58
LIMD2-209ENST00000580222 ANKRD18AQ8IVF6 992 aa24.94■■□□□ 1.58
LIMD2-209ENST00000580222 CD99L2Q8TCZ2 262 aa24.94■■□□□ 1.58
LIMD2-209ENST00000580222 FBXW7Q969H0 707 aa24.94■■□□□ 1.58
LIMD2-209ENST00000580222 ZBED3Q96IU2 234 aaPredicted RBP24.94■■□□□ 1.58
LIMD2-209ENST00000580222 MYD88Q99836 296 aa24.94■■□□□ 1.58
LIMD2-209ENST00000580222 PSME4Q14997 1843 aa24.93■■□□□ 1.58
LIMD2-209ENST00000580222 ALDH1A1P00352 501 aa24.93■■□□□ 1.58
LIMD2-209ENST00000580222 PCCAP05165 728 aaPredicted RBP24.93■■□□□ 1.58
LIMD2-209ENST00000580222 LMOD3Q0VAK6 560 aa24.93■■□□□ 1.58
LIMD2-209ENST00000580222 DUSP27Q5VZP5 1158 aa24.93■■□□□ 1.58
LIMD2-209ENST00000580222 OGFOD1Q8N543 542 aa24.93■■□□□ 1.58
LIMD2-209ENST00000580222 MINPP1Q9UNW1 487 aa24.93■■□□□ 1.58
LIMD2-209ENST00000580222 HOXB7P09629 217 aa24.92■■□□□ 1.58
LIMD2-209ENST00000580222 STRIP1Q5VSL9 837 aa24.92■■□□□ 1.58
LIMD2-209ENST00000580222 ARMC5Q96C12 935 aa24.92■■□□□ 1.58
LIMD2-209ENST00000580222 SLC10A4Q96EP9 437 aa24.92■■□□□ 1.58
LIMD2-209ENST00000580222 MANSC4A6NHS7 340 aaPredicted RBP24.91■■□□□ 1.58
LIMD2-209ENST00000580222 MED23Q9ULK4 1368 aa24.91■■□□□ 1.58
LIMD2-209ENST00000580222 KIAA0100Q14667 2235 aaKnown RBP24.9■■□□□ 1.58
LIMD2-209ENST00000580222 KLRK1P26718 216 aa24.9■■□□□ 1.58
LIMD2-209ENST00000580222 GJA5P36382 358 aa24.9■■□□□ 1.58
LIMD2-209ENST00000580222 KIAA0825Q8IV33 1275 aa24.9■■□□□ 1.58
LIMD2-209ENST00000580222 WNK4Q96J92 1243 aa24.9■■□□□ 1.58
LIMD2-209ENST00000580222 PCDHAC2Q9Y5I4 1007 aa24.9■■□□□ 1.58
LIMD2-209ENST00000580222 SSC5DA1L4H1 1573 aa24.89■■□□□ 1.58
LIMD2-209ENST00000580222 APAF1O14727 1248 aa24.89■■□□□ 1.58
LIMD2-209ENST00000580222 INHBEP58166 350 aa24.89■■□□□ 1.58
LIMD2-209ENST00000580222 CRHR2Q13324 411 aa24.89■■□□□ 1.58
LIMD2-209ENST00000580222 CCDC191Q8NCU4 936 aa24.89■■□□□ 1.58
LIMD2-209ENST00000580222 CCT4P50991 539 aaKnown RBP24.88■■□□□ 1.57
LIMD2-209ENST00000580222 APOBEC3FQ8IUX4 373 aaKnown RBP24.88■■□□□ 1.57
LIMD2-209ENST00000580222 PTPN18Q99952 460 aa24.88■■□□□ 1.57
LIMD2-209ENST00000580222 DEFB129Q9H1M3 183 aa24.88■■□□□ 1.57
LIMD2-209ENST00000580222 ZNF646O15015 1829 aaPredicted RBP24.88■■□□□ 1.57
LIMD2-209ENST00000580222 GOLGA2Q08379 1002 aa24.87■■□□□ 1.57
LIMD2-209ENST00000580222 MAP3K11Q16584 847 aa24.87■■□□□ 1.57
LIMD2-209ENST00000580222 ERO1AQ96HE7 468 aa24.87■■□□□ 1.57
LIMD2-209ENST00000580222 COA1Q9GZY4 146 aa24.87■■□□□ 1.57
LIMD2-209ENST00000580222 BSDC1Q9NW68 430 aaPredicted RBP24.87■■□□□ 1.57
LIMD2-209ENST00000580222 CWC25Q9NXE8 425 aaPredicted RBP24.87■■□□□ 1.57
LIMD2-209ENST00000580222 RANBP2P49792 3224 aaKnown RBP24.87■■□□□ 1.57
LIMD2-209ENST00000580222 MYO3BQ8WXR4 1341 aa24.86■■□□□ 1.57
LIMD2-209ENST00000580222 HSP90B1P14625 803 aaKnown RBP24.86■■□□□ 1.57
LIMD2-209ENST00000580222 TTLL5Q6EMB2 1281 aa24.86■■□□□ 1.57
LIMD2-209ENST00000580222 TTLL11Q8NHH1 800 aa24.86■■□□□ 1.57
LIMD2-209ENST00000580222 GREM2Q9H772 168 aa24.86■■□□□ 1.57
LIMD2-209ENST00000580222 EFCC1Q9HA90 598 aa24.86■■□□□ 1.57
LIMD2-209ENST00000580222 AOX1Q06278 1338 aa24.86■■□□□ 1.57
LIMD2-209ENST00000580222 ZBTB48P10074 688 aaPredicted RBP24.85■■□□□ 1.57
LIMD2-209ENST00000580222 CTSWP56202 376 aa24.85■■□□□ 1.57
LIMD2-209ENST00000580222 GTF2IP78347 998 aa24.84■■□□□ 1.57
LIMD2-209ENST00000580222 ZNF333Q96JL9 665 aa24.84■■□□□ 1.57
LIMD2-209ENST00000580222 MBIPQ9NS73 344 aa24.84■■□□□ 1.57
LIMD2-209ENST00000580222 ELL2O00472 640 aaPredicted RBP24.83■■□□□ 1.57
LIMD2-209ENST00000580222 CERS5Q8N5B7 392 aa24.83■■□□□ 1.57
LIMD2-209ENST00000580222 CDC5LQ99459 802 aaKnown RBP24.83■■□□□ 1.57
LIMD2-209ENST00000580222 METTL22Q9BUU2 404 aaPredicted RBP24.83■■□□□ 1.57
LIMD2-209ENST00000580222 TRIOBPQ9H2D6 2365 aa24.82■■□□□ 1.56
LIMD2-209ENST00000580222 H0YGN5 161 aa24.82■■□□□ 1.56
LIMD2-209ENST00000580222 CEP290O15078 2479 aa24.82■■□□□ 1.56
LIMD2-209ENST00000580222 SP3Q02447 781 aa24.82■■□□□ 1.56
LIMD2-209ENST00000580222 OTUD5Q96G74 571 aa24.82■■□□□ 1.56
LIMD2-209ENST00000580222 IGKV5-2P06315 115 aa24.81■■□□□ 1.56
LIMD2-209ENST00000580222 NBPF12Q5TAG4 269 aaPredicted RBP24.81■■□□□ 1.56
LIMD2-209ENST00000580222 USP2O75604 605 aaPredicted RBP24.8■■□□□ 1.56
LIMD2-209ENST00000580222 A0A0C4DFX4 3053 aa24.8■■□□□ 1.56
LIMD2-209ENST00000580222 CLRN2A0PK11 232 aa24.79■■□□□ 1.56
LIMD2-209ENST00000580222 TESPA1A2RU30 521 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms