RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 IRF5Q13568 498 aa6.7□□□□□ -1.34
CDH8-206ENST00000580044 PRRT3Q5FWE3 981 aa6.7□□□□□ -1.34
CDH8-206ENST00000580044 LINC00114Q6XXX2 140 aa6.7□□□□□ -1.34
CDH8-206ENST00000580044 MORC1Q86VD1 984 aa6.7□□□□□ -1.34
CDH8-206ENST00000580044 FRAT1Q92837 279 aaPredicted RBP6.7□□□□□ -1.34
CDH8-206ENST00000580044 MLH3Q9UHC1 1453 aa6.7□□□□□ -1.34
CDH8-206ENST00000580044 CDC42BPGQ6DT37 1551 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 NOS1P29475 1434 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 KIF3BO15066 747 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 BCAR3O75815 825 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 STAU1O95793 577 aaKnown RBP6.69□□□□□ -1.34
CDH8-206ENST00000580044 APBA3O96018 575 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 FURINP09958 794 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 FAM157BP0CG42 384 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 SKIP12755 728 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 CD33P20138 364 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 COL8A1P27658 744 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 SCNN1DP51172 638 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 RARSP54136 660 aaKnown RBP6.69□□□□□ -1.34
CDH8-206ENST00000580044 TNP2Q05952 138 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 CFAP70Q5T0N1 1121 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 AFAP1Q8N556 730 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 SLC4A9Q96Q91 983 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 PNNQ9H307 717 aaKnown RBP6.69□□□□□ -1.34
CDH8-206ENST00000580044 ZNF232Q9UNY5 417 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 ABCC3O15438 1527 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 NEXMIFQ5QGS0 1516 aa6.69□□□□□ -1.34
CDH8-206ENST00000580044 POGZQ7Z3K3 1410 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 TULP4Q9NRJ4 1543 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 C1QTNF9BB2RNN3 333 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 FRAT2O75474 233 aaPredicted RBP6.68□□□□□ -1.34
CDH8-206ENST00000580044 IGHDP01880 384 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 ATP4AP20648 1035 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 PTMSP20962 102 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 ZNF468Q5VIY5 522 aaPredicted RBP6.68□□□□□ -1.34
CDH8-206ENST00000580044 TRIM50Q86XT4 487 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 TBC1D32Q96NH3 1257 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 CHMP4BQ9H444 224 aaKnown RBP6.68□□□□□ -1.34
CDH8-206ENST00000580044 C14orf93Q9H972 538 aaKnown RBP6.68□□□□□ -1.34
CDH8-206ENST00000580044 ISY1Q9ULR0 285 aaKnown RBP6.68□□□□□ -1.34
CDH8-206ENST00000580044 USP19O94966 1318 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 EVC2Q86UK5 1308 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 ADGRF5Q8IZF2 1346 aa6.68□□□□□ -1.34
CDH8-206ENST00000580044 ZFYVE9O95405 1425 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 SPATA31C1P0DKV0 1188 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 GATA4P43694 442 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 DGKGP49619 791 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 MVPQ14764 893 aaKnown RBP6.67□□□□□ -1.34
CDH8-206ENST00000580044 MTFR1Q15390 333 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 SAMD5Q5TGI4 173 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 ZKSCAN2Q63HK3 967 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 SKAP1Q86WV1 359 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 TCP11L2Q8N4U5 519 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 ZIC5Q96T25 663 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 SUV39H2Q9H5I1 410 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 ANKIB1Q9P2G1 1089 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 COG6Q9Y2V7 657 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 GPC6Q9Y625 555 aaPredicted RBP6.67□□□□□ -1.34
CDH8-206ENST00000580044 IL16Q14005 1332 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 NPATQ14207 1427 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 ARHGAP31Q2M1Z3 1444 aa6.67□□□□□ -1.34
CDH8-206ENST00000580044 ITGB2P05107 769 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 ATP1A2P50993 1020 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 PCBP4P57723 403 aaKnown RBP6.66□□□□□ -1.34
CDH8-206ENST00000580044 GTF2IP78347 998 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 HDAC1Q13547 482 aaPredicted RBP6.66□□□□□ -1.34
CDH8-206ENST00000580044 FTSJ3Q8IY81 847 aaKnown RBP6.66□□□□□ -1.34
CDH8-206ENST00000580044 PANK1Q8TE04 598 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 ZNF428Q96B54 188 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 NACC1Q96RE7 527 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 PLVAPQ9BX97 442 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 DNAAF2Q9NVR5 837 aaKnown RBP6.66□□□□□ -1.34
CDH8-206ENST00000580044 BRPF3Q9ULD4 1205 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 DDX19BQ9UMR2 479 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 SIGLEC1Q9BZZ2 1709 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 KIF16BQ96L93 1317 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 ATAD2Q6PL18 1390 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 ASXL2Q76L83 1435 aa6.66□□□□□ -1.34
CDH8-206ENST00000580044 COL3A1P02461 1466 aaPredicted RBP6.66□□□□□ -1.34
CDH8-206ENST00000580044 ELOA3CA0A087WX78 387 aaPredicted RBP6.65□□□□□ -1.34
CDH8-206ENST00000580044 ELOA3DA6NLF2 546 aaPredicted RBP6.65□□□□□ -1.34
CDH8-206ENST00000580044 ELOA3BQ3SY89 546 aa6.65□□□□□ -1.34
CDH8-206ENST00000580044 CD163Q86VB7 1156 aa6.65□□□□□ -1.34
CDH8-206ENST00000580044 NFATC2IPQ8NCF5 419 aa6.65□□□□□ -1.34
CDH8-206ENST00000580044 ELOA3Q8NG57 546 aa6.65□□□□□ -1.34
CDH8-206ENST00000580044 ANTXR1Q9H6X2 564 aa6.65□□□□□ -1.34
CDH8-206ENST00000580044 NEO1Q92859 1461 aa6.65□□□□□ -1.35
CDH8-206ENST00000580044 PREX1Q8TCU6 1659 aa6.65□□□□□ -1.35
CDH8-206ENST00000580044 CFAP65Q6ZU64 1925 aaKnown RBP6.64□□□□□ -1.35
CDH8-206ENST00000580044 SERTM1A2A2V5 107 aa6.64□□□□□ -1.35
CDH8-206ENST00000580044 TMEM229AB2RXF0 380 aa6.64□□□□□ -1.35
CDH8-206ENST00000580044 IPO8O15397 1037 aaKnown RBP6.64□□□□□ -1.35
CDH8-206ENST00000580044 NOS2P35228 1153 aa6.64□□□□□ -1.35
CDH8-206ENST00000580044 TRIM28Q13263 835 aaKnown RBP6.64□□□□□ -1.35
CDH8-206ENST00000580044 DZIP1LQ8IYY4 767 aaKnown RBP6.64□□□□□ -1.35
CDH8-206ENST00000580044 CHMP5Q9NZZ3 219 aa6.64□□□□□ -1.35
CDH8-206ENST00000580044 PARP3Q9Y6F1 533 aa6.64□□□□□ -1.35
CDH8-206ENST00000580044 PPIP5K1Q6PFW1 1433 aa6.64□□□□□ -1.35
CDH8-206ENST00000580044 NCOA3Q9Y6Q9 1424 aa6.64□□□□□ -1.35
CDH8-206ENST00000580044 DIP2CQ9Y2E4 1556 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms