RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 IFIT5Q13325 482 aaKnown RBP17.41■□□□□ 0.38
GGA3-208ENST00000579743 CCDC102AQ96A19 550 aa17.41■□□□□ 0.38
GGA3-208ENST00000579743 GGA3Q9NZ52 723 aa17.41■□□□□ 0.38
GGA3-208ENST00000579743 COL4A1P02462 1669 aa17.41■□□□□ 0.38
GGA3-208ENST00000579743 ZNF609O15014 1411 aa17.4■□□□□ 0.38
GGA3-208ENST00000579743 CSF1RP07333 972 aa17.4■□□□□ 0.38
GGA3-208ENST00000579743 BRPF1P55201 1214 aaPredicted RBP17.4■□□□□ 0.38
GGA3-208ENST00000579743 SCARF1Q14162 830 aa17.4■□□□□ 0.38
GGA3-208ENST00000579743 MYOZ2Q9NPC6 264 aa17.4■□□□□ 0.38
GGA3-208ENST00000579743 CHMP3Q9Y3E7 222 aa17.4■□□□□ 0.38
GGA3-208ENST00000579743 ZNF804BA4D1E1 1349 aa17.4■□□□□ 0.38
GGA3-208ENST00000579743 AOC2O75106 756 aa17.39■□□□□ 0.37
GGA3-208ENST00000579743 FAM161AQ3B820 660 aa17.39■□□□□ 0.37
GGA3-208ENST00000579743 TAF7LQ5H9L4 462 aa17.39■□□□□ 0.37
GGA3-208ENST00000579743 STRIP1Q5VSL9 837 aa17.39■□□□□ 0.37
GGA3-208ENST00000579743 RGMBQ6NW40 437 aa17.39■□□□□ 0.37
GGA3-208ENST00000579743 C9orf78Q9NZ63 289 aaPredicted RBP17.39■□□□□ 0.37
GGA3-208ENST00000579743 HDAC9Q9UKV0 1011 aa17.39■□□□□ 0.37
GGA3-208ENST00000579743 ADM5C9JUS6 153 aa17.38■□□□□ 0.37
GGA3-208ENST00000579743 EGFRP00533 1210 aa17.38■□□□□ 0.37
GGA3-208ENST00000579743 CCDC57Q2TAC2 916 aa17.38■□□□□ 0.37
GGA3-208ENST00000579743 ANGEL2Q5VTE6 544 aaKnown RBP17.38■□□□□ 0.37
GGA3-208ENST00000579743 PITPNM2Q9BZ72 1349 aa17.38■□□□□ 0.37
GGA3-208ENST00000579743 ZNF157P51786 506 aaPredicted RBP17.37■□□□□ 0.37
GGA3-208ENST00000579743 FKBP1BP68106 108 aa17.37■□□□□ 0.37
GGA3-208ENST00000579743 TTLL5Q6EMB2 1281 aa17.37■□□□□ 0.37
GGA3-208ENST00000579743 GMLQ99445 158 aa17.37■□□□□ 0.37
GGA3-208ENST00000579743 THSD7BQ9C0I4 1608 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 F6X3S4 739 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 ALDH1L1O75891 902 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 NF2P35240 595 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 CASP7P55210 303 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 CHRNDQ07001 517 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 BEND3Q5T5X7 828 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 SLC4A10Q6U841 1118 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 SRCIN1Q9C0H9 1055 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 SCN9AQ15858 1988 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 PCNTO95613 3336 aa17.36■□□□□ 0.37
GGA3-208ENST00000579743 GRM8O00222 908 aa17.35■□□□□ 0.37
GGA3-208ENST00000579743 DACT2Q5SW24 774 aa17.35■□□□□ 0.37
GGA3-208ENST00000579743 ZNF804AQ7Z570 1209 aa17.35■□□□□ 0.37
GGA3-208ENST00000579743 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
GGA3-208ENST00000579743 CDCA5Q96FF9 252 aa17.35■□□□□ 0.37
GGA3-208ENST00000579743 PSME4Q14997 1843 aa17.34■□□□□ 0.37
GGA3-208ENST00000579743 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
GGA3-208ENST00000579743 SPEF2Q9C093 1822 aa17.34■□□□□ 0.37
GGA3-208ENST00000579743 CNNM1Q9NRU3 951 aa17.34■□□□□ 0.37
GGA3-208ENST00000579743 POLR2AP24928 1970 aaKnown RBP17.33■□□□□ 0.37
GGA3-208ENST00000579743 FOXO4P98177 505 aa17.33■□□□□ 0.36
GGA3-208ENST00000579743 LDHAL6AQ6ZMR3 332 aa17.33■□□□□ 0.36
GGA3-208ENST00000579743 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
GGA3-208ENST00000579743 WTIPA6NIX2 430 aaPredicted RBP17.32■□□□□ 0.36
GGA3-208ENST00000579743 GTF2IP78347 998 aa17.32■□□□□ 0.36
GGA3-208ENST00000579743 TTLL12Q14166 644 aaPredicted RBP17.32■□□□□ 0.36
GGA3-208ENST00000579743 DLK2Q6UY11 383 aa17.32■□□□□ 0.36
GGA3-208ENST00000579743 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
GGA3-208ENST00000579743 E9PSI1 815 aa17.31■□□□□ 0.36
GGA3-208ENST00000579743 C15orf52Q6ZUT6 534 aaKnown RBP17.31■□□□□ 0.36
GGA3-208ENST00000579743 TXNRD3Q86VQ6 643 aa17.31■□□□□ 0.36
GGA3-208ENST00000579743 APOBEC3FQ8IUX4 373 aaKnown RBP17.31■□□□□ 0.36
GGA3-208ENST00000579743 CD209Q9NNX6 404 aa17.31■□□□□ 0.36
GGA3-208ENST00000579743 TSKSQ9UJT2 592 aa17.31■□□□□ 0.36
GGA3-208ENST00000579743 WNT10BO00744 389 aa17.3■□□□□ 0.36
GGA3-208ENST00000579743 MYO1BO43795 1136 aa17.3■□□□□ 0.36
GGA3-208ENST00000579743 PLIN1O60240 522 aa17.3■□□□□ 0.36
GGA3-208ENST00000579743 TAF5LO75529 589 aa17.3■□□□□ 0.36
GGA3-208ENST00000579743 KIF23Q02241 960 aaPredicted RBP17.3■□□□□ 0.36
GGA3-208ENST00000579743 NBPF9Q3BBW0 867 aa17.3■□□□□ 0.36
GGA3-208ENST00000579743 KIAA0825Q8IV33 1275 aa17.3■□□□□ 0.36
GGA3-208ENST00000579743 HELBQ8NG08 1087 aaPredicted RBP17.3■□□□□ 0.36
GGA3-208ENST00000579743 ABHD8Q96I13 439 aa17.3■□□□□ 0.36
GGA3-208ENST00000579743 SAGE1Q9NXZ1 904 aa17.3■□□□□ 0.36
GGA3-208ENST00000579743 SLC10A3P09131 477 aa17.29■□□□□ 0.36
GGA3-208ENST00000579743 DLGAP5Q15398 846 aa17.29■□□□□ 0.36
GGA3-208ENST00000579743 MXD3Q9BW11 206 aa17.29■□□□□ 0.36
GGA3-208ENST00000579743 PTPRCP08575 1304 aa17.28■□□□□ 0.36
GGA3-208ENST00000579743 FAM155AB1AL88 458 aaPredicted RBP17.28■□□□□ 0.36
GGA3-208ENST00000579743 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
GGA3-208ENST00000579743 KLRK1P26718 216 aa17.27■□□□□ 0.36
GGA3-208ENST00000579743 PAPPA2Q9BXP8 1791 aa17.26■□□□□ 0.35
GGA3-208ENST00000579743 SASH1O94885 1247 aa17.26■□□□□ 0.35
GGA3-208ENST00000579743 IL1R1P14778 569 aa17.26■□□□□ 0.35
GGA3-208ENST00000579743 FKBP1AP62942 108 aaKnown RBP17.26■□□□□ 0.35
GGA3-208ENST00000579743 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
GGA3-208ENST00000579743 ZNF594Q96JF6 807 aaPredicted RBP17.26■□□□□ 0.35
GGA3-208ENST00000579743 MROH5Q6ZUA9 1318 aa17.25■□□□□ 0.35
GGA3-208ENST00000579743 ZNF521Q96K83 1311 aa17.25■□□□□ 0.35
GGA3-208ENST00000579743 CCDC85CA6NKD9 419 aa17.25■□□□□ 0.35
GGA3-208ENST00000579743 TRPA1O75762 1119 aa17.25■□□□□ 0.35
GGA3-208ENST00000579743 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
GGA3-208ENST00000579743 ZIC5Q96T25 663 aa17.25■□□□□ 0.35
GGA3-208ENST00000579743 UBE2Q2LH0YL09 131 aa17.24■□□□□ 0.35
GGA3-208ENST00000579743 RBM5P52756 815 aaKnown RBP eCLIP17.24■□□□□ 0.35
GGA3-208ENST00000579743 DGKZQ13574 1117 aa17.24■□□□□ 0.35
GGA3-208ENST00000579743 EPHA10Q5JZY3 1008 aa17.24■□□□□ 0.35
GGA3-208ENST00000579743 RASAL3Q86YV0 1011 aa17.24■□□□□ 0.35
GGA3-208ENST00000579743 MRPL50Q8N5N7 158 aaKnown RBP17.24■□□□□ 0.35
GGA3-208ENST00000579743 MTMR14Q8NCE2 650 aa17.24■□□□□ 0.35
GGA3-208ENST00000579743 CSRNP1Q96S65 589 aa17.24■□□□□ 0.35
GGA3-208ENST00000579743 RNF186Q9NXI6 227 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms