RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 ZNF652Q9Y2D9 606 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 DDX49Q9Y6V7 483 aaKnown RBP10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 SPATA31A6Q5VVP1 1343 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 MROH5Q6ZUA9 1318 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 WDR19Q8NEZ3 1342 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 RNF113AO15541 343 aaKnown RBP10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 IFIT1P09914 478 aaKnown RBP10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 UQCRFS1P1P0C7P4 283 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 VPS72Q15906 364 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 TPRNQ4KMQ1 711 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 TAF7LQ5H9L4 462 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 DZIP3Q86Y13 1208 aaKnown RBP10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 TTLL11Q8NHH1 800 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 LLPHQ9BRT6 129 aaKnown RBP10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 AGXT2Q9BYV1 514 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 ZBTB1Q9Y2K1 713 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 CHMP3Q9Y3E7 222 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 KIF3AQ9Y496 699 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 RIPOR2Q9Y4F9 1068 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 COL24A1Q17RW2 1714 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 ZMYM6O95789 1325 aa10.55□□□□□ -0.72
PPP4R1-213ENST00000579609 STX6O43752 255 aa10.54□□□□□ -0.72
PPP4R1-213ENST00000579609 PHF14O94880 888 aa10.54□□□□□ -0.72
PPP4R1-213ENST00000579609 ZSCAN22P10073 491 aaPredicted RBP10.54□□□□□ -0.72
PPP4R1-213ENST00000579609 NCLP19338 710 aaKnown RBP10.54□□□□□ -0.72
PPP4R1-213ENST00000579609 PRIM1P49642 420 aaKnown RBP10.54□□□□□ -0.72
PPP4R1-213ENST00000579609 CNTNAP4Q9C0A0 1308 aa10.54□□□□□ -0.72
PPP4R1-213ENST00000579609 A0A1B0GUL6 1792 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 IRS4O14654 1257 aaPredicted RBP10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 LETM1O95202 739 aaPredicted RBP10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 ITGA6P23229 1130 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 ARID4AP29374 1257 aaPredicted RBP10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 SIK1P57059 783 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 ATP2B3Q16720 1220 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 LRRC24Q50LG9 513 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 TTC39AQ5SRH9 613 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 MCTP1Q6DN14 999 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 VGLL2Q8N8G2 317 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 NEK1Q96PY6 1258 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 GRPEL1Q9HAV7 217 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 TRMT112Q9UI30 125 aaKnown RBP10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 LY75O60449 1722 aa10.53□□□□□ -0.72
PPP4R1-213ENST00000579609 MYH14Q7Z406 1995 aaKnown RBP10.52□□□□□ -0.72
PPP4R1-213ENST00000579609 PDE8BO95263 885 aa10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 ADCK5Q3MIX3 580 aa10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 GORABQ5T7V8 394 aa10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 RC3H1Q5TC82 1133 aaKnown RBP10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 INTS5Q6P9B9 1019 aaKnown RBP10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 LDHAL6AQ6ZMR3 332 aa10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 ZNF589Q86UQ0 364 aaPredicted RBP10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 FNBP4Q8N3X1 1017 aaPredicted RBP10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 MARCH10Q8NA82 808 aaPredicted RBP10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 LPIN2Q92539 896 aa10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 APPBP2Q92624 585 aa10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 XAGE2Q96GT9 111 aa10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 ELP1O95163 1332 aa10.52□□□□□ -0.73
PPP4R1-213ENST00000579609 BCL9LQ86UU0 1499 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 GOLIM4O00461 696 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 PPP1R37O75864 691 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 CAMTA2O94983 1202 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 F13A1P00488 732 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 SYT1P21579 422 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 CRKLP46109 303 aaKnown RBP10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 EVCP57679 992 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 TIMM10P62072 90 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 HMGN5P82970 282 aaKnown RBP10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 PKP1Q13835 747 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 UBE3CQ15386 1083 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 PUM3Q15397 648 aaKnown RBP10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 HLFQ16534 295 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 CCDC152Q4G0S7 254 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 METTL24Q5JXM2 366 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 ATL3Q6DD88 541 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 DHX32Q7L7V1 743 aaKnown RBP10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 FBXO22Q8NEZ5 403 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 FAM89AQ96GI7 184 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 CDC5LQ99459 802 aaKnown RBP10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 UTP14AQ9BVJ6 771 aaKnown RBP10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 CASZ1Q86V15 1759 aa10.51□□□□□ -0.73
PPP4R1-213ENST00000579609 MYH15Q9Y2K3 1946 aa10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 BTAF1O14981 1849 aa10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 HSPD1P10809 573 aaKnown RBP10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 XRCC6P12956 609 aaKnown RBP eCLIP10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 FGFR2P21802 821 aa10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 ME3Q16798 604 aa10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 DDX46Q7L014 1031 aaKnown RBP10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 JARID2Q92833 1246 aaPredicted RBP10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 ZNF274Q96GC6 653 aaPredicted RBP10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 MTA3Q9BTC8 594 aa10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 CNNM1Q9NRU3 951 aa10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 MAST3O60307 1309 aa10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 UBN2Q6ZU65 1347 aa10.5□□□□□ -0.73
PPP4R1-213ENST00000579609 TIAM2Q8IVF5 1701 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms