RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 KLRK1P26718 216 aa29.93■■■□□ 2.38
LIMD2-207ENST00000579329 TXNRD3Q86VQ6 643 aa29.93■■■□□ 2.38
LIMD2-207ENST00000579329 FTSJ3Q8IY81 847 aaKnown RBP29.93■■■□□ 2.38
LIMD2-207ENST00000579329 TMEM57Q8N5G2 664 aa29.93■■■□□ 2.38
LIMD2-207ENST00000579329 ADARB2Q9NS39 739 aaKnown RBP29.93■■■□□ 2.38
LIMD2-207ENST00000579329 RIPOR2Q9Y4F9 1068 aa29.93■■■□□ 2.38
LIMD2-207ENST00000579329 MROH5Q6ZUA9 1318 aa29.93■■■□□ 2.38
LIMD2-207ENST00000579329 C15orf52Q6ZUT6 534 aaKnown RBP29.92■■■□□ 2.38
LIMD2-207ENST00000579329 USP50Q70EL3 339 aaPredicted RBP29.92■■■□□ 2.38
LIMD2-207ENST00000579329 DPF2Q92785 391 aa29.92■■■□□ 2.38
LIMD2-207ENST00000579329 CLEC11AQ9Y240 323 aa29.92■■■□□ 2.38
LIMD2-207ENST00000579329 ZBTB12Q9Y330 459 aaPredicted RBP29.92■■■□□ 2.38
LIMD2-207ENST00000579329 VIL1P09327 827 aaKnown RBP29.91■■■□□ 2.38
LIMD2-207ENST00000579329 RFX5P48382 616 aaPredicted RBP29.91■■■□□ 2.38
LIMD2-207ENST00000579329 DZIP1LQ8IYY4 767 aaKnown RBP29.91■■■□□ 2.38
LIMD2-207ENST00000579329 CREBZFQ9NS37 354 aa29.91■■■□□ 2.38
LIMD2-207ENST00000579329 MKRN1Q9UHC7 482 aaKnown RBP29.91■■■□□ 2.38
LIMD2-207ENST00000579329 PSME4Q14997 1843 aa29.91■■■□□ 2.38
LIMD2-207ENST00000579329 SNAP23O00161 211 aa29.9■■■□□ 2.38
LIMD2-207ENST00000579329 LRRC24Q50LG9 513 aa29.9■■■□□ 2.38
LIMD2-207ENST00000579329 KLHDC4Q8TBB5 520 aa29.9■■■□□ 2.38
LIMD2-207ENST00000579329 CNOT7Q9UIV1 285 aaKnown RBP29.9■■■□□ 2.38
LIMD2-207ENST00000579329 USP17L3A6NCW0 530 aa29.89■■■□□ 2.38
LIMD2-207ENST00000579329 USP17L4A6NCW7 530 aa29.89■■■□□ 2.38
LIMD2-207ENST00000579329 USP17L1Q7RTZ2 530 aa29.89■■■□□ 2.38
LIMD2-207ENST00000579329 MICALL2Q8IY33 904 aa29.89■■■□□ 2.38
LIMD2-207ENST00000579329 IRS2Q9Y4H2 1338 aa29.89■■■□□ 2.38
LIMD2-207ENST00000579329 ZNF609O15014 1411 aa29.88■■■□□ 2.37
LIMD2-207ENST00000579329 H7C1D1 291 aa29.88■■■□□ 2.37
LIMD2-207ENST00000579329 UBE4AQ14139 1066 aa29.88■■■□□ 2.37
LIMD2-207ENST00000579329 METTL24Q5JXM2 366 aa29.88■■■□□ 2.37
LIMD2-207ENST00000579329 PTPN12Q05209 780 aaKnown RBP29.87■■■□□ 2.37
LIMD2-207ENST00000579329 RSBN1LQ6PCB5 846 aaPredicted RBP29.87■■■□□ 2.37
LIMD2-207ENST00000579329 RCAN3Q9UKA8 241 aa29.87■■■□□ 2.37
LIMD2-207ENST00000579329 EYA2O00167 538 aa29.86■■■□□ 2.37
LIMD2-207ENST00000579329 GNAI2P04899 355 aa29.86■■■□□ 2.37
LIMD2-207ENST00000579329 ZNF804AQ7Z570 1209 aa29.86■■■□□ 2.37
LIMD2-207ENST00000579329 AGBL3Q8NEM8 1001 aa29.86■■■□□ 2.37
LIMD2-207ENST00000579329 CD209Q9NNX6 404 aa29.85■■■□□ 2.37
LIMD2-207ENST00000579329 FBXO3Q9UK99 471 aa29.85■■■□□ 2.37
LIMD2-207ENST00000579329 SHTN1A0MZ66 631 aa29.84■■■□□ 2.37
LIMD2-207ENST00000579329 RLBP1P12271 317 aa29.84■■■□□ 2.37
LIMD2-207ENST00000579329 STRIP1Q5VSL9 837 aa29.84■■■□□ 2.37
LIMD2-207ENST00000579329 ITPRIPQ8IWB1 547 aa29.84■■■□□ 2.37
LIMD2-207ENST00000579329 FBXW7Q969H0 707 aa29.84■■■□□ 2.37
LIMD2-207ENST00000579329 MS4A1P11836 297 aa29.83■■■□□ 2.37
LIMD2-207ENST00000579329 MTX1Q13505 466 aa29.83■■■□□ 2.37
LIMD2-207ENST00000579329 VGLL2Q8N8G2 317 aa29.83■■■□□ 2.37
LIMD2-207ENST00000579329 TRPM4Q8TD43 1214 aa29.83■■■□□ 2.37
LIMD2-207ENST00000579329 PDE8BO95263 885 aa29.82■■■□□ 2.36
LIMD2-207ENST00000579329 MAP1SQ66K74 1059 aaPredicted RBP29.82■■■□□ 2.36
LIMD2-207ENST00000579329 MYO3BQ8WXR4 1341 aa29.81■■■□□ 2.36
LIMD2-207ENST00000579329 PASKQ96RG2 1323 aa29.81■■■□□ 2.36
LIMD2-207ENST00000579329 CIAO1O76071 339 aa29.81■■■□□ 2.36
LIMD2-207ENST00000579329 DACT2Q5SW24 774 aa29.81■■■□□ 2.36
LIMD2-207ENST00000579329 CNTROBQ8N137 903 aa29.81■■■□□ 2.36
LIMD2-207ENST00000579329 GMLQ99445 158 aa29.81■■■□□ 2.36
LIMD2-207ENST00000579329 ZNF646O15015 1829 aaPredicted RBP29.8■■■□□ 2.36
LIMD2-207ENST00000579329 CNTNAP1P78357 1384 aa29.8■■■□□ 2.36
LIMD2-207ENST00000579329 SRGAP3O43295 1099 aa29.8■■■□□ 2.36
LIMD2-207ENST00000579329 IL1R1P14778 569 aa29.8■■■□□ 2.36
LIMD2-207ENST00000579329 TTLL5Q6EMB2 1281 aa29.8■■■□□ 2.36
LIMD2-207ENST00000579329 SIL1Q9H173 461 aa29.8■■■□□ 2.36
LIMD2-207ENST00000579329 COPRSQ9NQ92 184 aa29.8■■■□□ 2.36
LIMD2-207ENST00000579329 ITGBL1O95965 494 aaPredicted RBP29.79■■■□□ 2.36
LIMD2-207ENST00000579329 HIRAP54198 1017 aaPredicted RBP29.79■■■□□ 2.36
LIMD2-207ENST00000579329 GTF2IP78347 998 aa29.79■■■□□ 2.36
LIMD2-207ENST00000579329 ATG9AQ7Z3C6 839 aa29.79■■■□□ 2.36
LIMD2-207ENST00000579329 SAMD7Q7Z3H4 446 aa29.79■■■□□ 2.36
LIMD2-207ENST00000579329 ZC3H15Q8WU90 426 aaKnown RBP29.79■■■□□ 2.36
LIMD2-207ENST00000579329 PUM3Q15397 648 aaKnown RBP29.78■■■□□ 2.36
LIMD2-207ENST00000579329 TBC1D10BQ4KMP7 808 aaPredicted RBP29.78■■■□□ 2.36
LIMD2-207ENST00000579329 PANK1Q8TE04 598 aa29.78■■■□□ 2.36
LIMD2-207ENST00000579329 PA2G4Q9UQ80 394 aaKnown RBP29.78■■■□□ 2.36
LIMD2-207ENST00000579329 FOXN1O15353 648 aa29.77■■■□□ 2.36
LIMD2-207ENST00000579329 USP17L8P0C7I0 530 aa29.77■■■□□ 2.36
LIMD2-207ENST00000579329 HIBADHP31937 336 aaKnown RBP29.77■■■□□ 2.36
LIMD2-207ENST00000579329 IL15P40933 162 aaPredicted RBP29.77■■■□□ 2.36
LIMD2-207ENST00000579329 ZNF280AP59817 542 aaPredicted RBP29.77■■■□□ 2.36
LIMD2-207ENST00000579329 GYG1P46976 350 aa29.76■■■□□ 2.35
LIMD2-207ENST00000579329 KIF4BQ2VIQ3 1234 aa29.76■■■□□ 2.35
LIMD2-207ENST00000579329 FAM84BQ96KN1 310 aaPredicted RBP29.76■■■□□ 2.35
LIMD2-207ENST00000579329 YTHDC1Q96MU7 727 aaKnown RBP29.76■■■□□ 2.35
LIMD2-207ENST00000579329 MXD3Q9BW11 206 aa29.76■■■□□ 2.35
LIMD2-207ENST00000579329 PGAP2Q9UHJ9 254 aa29.76■■■□□ 2.35
LIMD2-207ENST00000579329 ZBTB7BO15156 539 aaPredicted RBP29.75■■■□□ 2.35
LIMD2-207ENST00000579329 IFIT1P09914 478 aaKnown RBP29.75■■■□□ 2.35
LIMD2-207ENST00000579329 FGFR2P21802 821 aa29.75■■■□□ 2.35
LIMD2-207ENST00000579329 RBM26Q5T8P6 1007 aaKnown RBP29.75■■■□□ 2.35
LIMD2-207ENST00000579329 CEP126Q9P2H0 1117 aa29.75■■■□□ 2.35
LIMD2-207ENST00000579329 EGFRP00533 1210 aa29.74■■■□□ 2.35
LIMD2-207ENST00000579329 CAVIN4Q5BKX8 364 aa29.74■■■□□ 2.35
LIMD2-207ENST00000579329 SLC5A1P13866 664 aa29.73■■■□□ 2.35
LIMD2-207ENST00000579329 VPS37DQ86XT2 251 aa29.73■■■□□ 2.35
LIMD2-207ENST00000579329 TDRD7Q8NHU6 1098 aaKnown RBP29.73■■■□□ 2.35
LIMD2-207ENST00000579329 PNMA6EA0A0J9YXQ4 647 aa29.72■■■□□ 2.35
LIMD2-207ENST00000579329 VEGFBP49765 207 aa29.72■■■□□ 2.35
LIMD2-207ENST00000579329 MMP14P50281 582 aa29.72■■■□□ 2.35
LIMD2-207ENST00000579329 FBXO33Q7Z6M2 555 aa29.72■■■□□ 2.35
LIMD2-207ENST00000579329 OGFOD1Q8N543 542 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms