RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 APOBEC3FQ8IUX4 373 aaKnown RBP18.14■□□□□ 0.49
CSNK1D-211ENST00000579316 CD99L2Q8TCZ2 262 aa18.14■□□□□ 0.49
CSNK1D-211ENST00000579316 EFCC1Q9HA90 598 aa18.14■□□□□ 0.49
CSNK1D-211ENST00000579316 SEC31BQ9NQW1 1179 aa18.14■□□□□ 0.49
CSNK1D-211ENST00000579316 XDHP47989 1333 aa18.14■□□□□ 0.49
CSNK1D-211ENST00000579316 MYO3BQ8WXR4 1341 aa18.14■□□□□ 0.49
CSNK1D-211ENST00000579316 ATP5J2-PTCD1G3V325 749 aa18.13■□□□□ 0.49
CSNK1D-211ENST00000579316 H0YGN5 161 aa18.13■□□□□ 0.49
CSNK1D-211ENST00000579316 DLL1O00548 723 aa18.13■□□□□ 0.49
CSNK1D-211ENST00000579316 ANKRD13DQ6ZTN6 518 aa18.13■□□□□ 0.49
CSNK1D-211ENST00000579316 OGFOD1Q8N543 542 aa18.13■□□□□ 0.49
CSNK1D-211ENST00000579316 TMEM106CQ9BVX2 250 aa18.13■□□□□ 0.49
CSNK1D-211ENST00000579316 ANGEL1Q9UNK9 670 aaKnown RBP18.13■□□□□ 0.49
CSNK1D-211ENST00000579316 UNCXA6NJT0 531 aa18.12■□□□□ 0.49
CSNK1D-211ENST00000579316 ATP2B4P23634 1241 aa18.12■□□□□ 0.49
CSNK1D-211ENST00000579316 WNK4Q96J92 1243 aa18.12■□□□□ 0.49
CSNK1D-211ENST00000579316 CHPF2Q9P2E5 772 aa18.12■□□□□ 0.49
CSNK1D-211ENST00000579316 MED23Q9ULK4 1368 aa18.12■□□□□ 0.49
CSNK1D-211ENST00000579316 SASH1O94885 1247 aa18.11■□□□□ 0.49
CSNK1D-211ENST00000579316 HSP90B1P14625 803 aaKnown RBP18.11■□□□□ 0.49
CSNK1D-211ENST00000579316 CAP1Q01518 475 aa18.11■□□□□ 0.49
CSNK1D-211ENST00000579316 CRHR2Q13324 411 aa18.11■□□□□ 0.49
CSNK1D-211ENST00000579316 PRKG1Q13976 671 aa18.11■□□□□ 0.49
CSNK1D-211ENST00000579316 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
CSNK1D-211ENST00000579316 SLC10A4Q96EP9 437 aa18.11■□□□□ 0.49
CSNK1D-211ENST00000579316 ZBED3Q96IU2 234 aaPredicted RBP18.11■□□□□ 0.49
CSNK1D-211ENST00000579316 MAPK8IP3Q9UPT6 1336 aa18.11■□□□□ 0.49
CSNK1D-211ENST00000579316 STRIP1Q5VSL9 837 aa18.1■□□□□ 0.49
CSNK1D-211ENST00000579316 ZBTB38Q8NAP3 1195 aaPredicted RBP18.1■□□□□ 0.49
CSNK1D-211ENST00000579316 PNNQ9H307 717 aaKnown RBP18.1■□□□□ 0.49
CSNK1D-211ENST00000579316 COL6A3P12111 3177 aa18.1■□□□□ 0.49
CSNK1D-211ENST00000579316 SSC5DA1L4H1 1573 aa18.09■□□□□ 0.49
CSNK1D-211ENST00000579316 SP3Q02447 781 aa18.09■□□□□ 0.49
CSNK1D-211ENST00000579316 CCDC152Q4G0S7 254 aa18.09■□□□□ 0.49
CSNK1D-211ENST00000579316 OTUD7BQ6GQQ9 843 aa18.09■□□□□ 0.49
CSNK1D-211ENST00000579316 MXD3Q9BW11 206 aa18.09■□□□□ 0.49
CSNK1D-211ENST00000579316 CLMNQ96JQ2 1002 aa18.08■□□□□ 0.48
CSNK1D-211ENST00000579316 TESPA1A2RU30 521 aaPredicted RBP18.07■□□□□ 0.48
CSNK1D-211ENST00000579316 HOXB7P09629 217 aa18.07■□□□□ 0.48
CSNK1D-211ENST00000579316 KRT24Q2M2I5 525 aa18.07■□□□□ 0.48
CSNK1D-211ENST00000579316 CHRDL2Q6WN34 429 aa18.07■□□□□ 0.48
CSNK1D-211ENST00000579316 NBPF11Q86T75 865 aa18.07■□□□□ 0.48
CSNK1D-211ENST00000579316 SLC17A8Q8NDX2 589 aa18.07■□□□□ 0.48
CSNK1D-211ENST00000579316 DEFB129Q9H1M3 183 aa18.07■□□□□ 0.48
CSNK1D-211ENST00000579316 DBF4Q9UBU7 674 aaPredicted RBP18.07■□□□□ 0.48
CSNK1D-211ENST00000579316 FZD1Q9UP38 647 aa18.07■□□□□ 0.48
CSNK1D-211ENST00000579316 SLC9C1Q4G0N8 1177 aa18.06■□□□□ 0.48
CSNK1D-211ENST00000579316 HDGFL1Q5TGJ6 251 aa18.06■□□□□ 0.48
CSNK1D-211ENST00000579316 ANKRD18AQ8IVF6 992 aa18.06■□□□□ 0.48
CSNK1D-211ENST00000579316 PPP2R3BQ9Y5P8 575 aa18.06■□□□□ 0.48
CSNK1D-211ENST00000579316 WTIPA6NIX2 430 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-211ENST00000579316 CHL1O00533 1208 aa18.05■□□□□ 0.48
CSNK1D-211ENST00000579316 PPP1R12BO60237 982 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-211ENST00000579316 RIPK4P57078 832 aa18.05■□□□□ 0.48
CSNK1D-211ENST00000579316 PTPN18Q99952 460 aa18.05■□□□□ 0.48
CSNK1D-211ENST00000579316 COA1Q9GZY4 146 aa18.05■□□□□ 0.48
CSNK1D-211ENST00000579316 HYPKQ9NX55 129 aa18.05■□□□□ 0.48
CSNK1D-211ENST00000579316 RBM27Q9P2N5 1060 aaKnown RBP18.05■□□□□ 0.48
CSNK1D-211ENST00000579316 PTCH2Q9Y6C5 1203 aa18.05■□□□□ 0.48
CSNK1D-211ENST00000579316 LAMA3Q16787 3333 aa18.05■□□□□ 0.48
CSNK1D-211ENST00000579316 PDE8AO60658 829 aa18.04■□□□□ 0.48
CSNK1D-211ENST00000579316 PCCAP05165 728 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-211ENST00000579316 GJA5P36382 358 aa18.04■□□□□ 0.48
CSNK1D-211ENST00000579316 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
CSNK1D-211ENST00000579316 ARHGEF6Q15052 776 aa18.04■□□□□ 0.48
CSNK1D-211ENST00000579316 SLC4A8Q2Y0W8 1093 aa18.04■□□□□ 0.48
CSNK1D-211ENST00000579316 PRO3102Q9H379 93 aa18.04■□□□□ 0.48
CSNK1D-211ENST00000579316 KIAA0825Q8IV33 1275 aa18.02■□□□□ 0.48
CSNK1D-211ENST00000579316 MTMR14Q8NCE2 650 aa18.02■□□□□ 0.48
CSNK1D-211ENST00000579316 CCDC191Q8NCU4 936 aa18.02■□□□□ 0.48
CSNK1D-211ENST00000579316 FBXW7Q969H0 707 aa18.02■□□□□ 0.48
CSNK1D-211ENST00000579316 MINPP1Q9UNW1 487 aa18.02■□□□□ 0.48
CSNK1D-211ENST00000579316 ZNF804BA4D1E1 1349 aa18.01■□□□□ 0.47
CSNK1D-211ENST00000579316 ECM29Q5VYK3 1845 aa18.01■□□□□ 0.47
CSNK1D-211ENST00000579316 CCT4P50991 539 aaKnown RBP18.01■□□□□ 0.47
CSNK1D-211ENST00000579316 SUPT20HL1Q3ZLR7 823 aa18.01■□□□□ 0.47
CSNK1D-211ENST00000579316 CDC5LQ99459 802 aaKnown RBP18.01■□□□□ 0.47
CSNK1D-211ENST00000579316 BSDC1Q9NW68 430 aaPredicted RBP18.01■□□□□ 0.47
CSNK1D-211ENST00000579316 IREB2P48200 963 aaKnown RBP18■□□□□ 0.47
CSNK1D-211ENST00000579316 TTLL5Q6EMB2 1281 aa18■□□□□ 0.47
CSNK1D-211ENST00000579316 TXNRD3Q86VQ6 643 aa18■□□□□ 0.47
CSNK1D-211ENST00000579316 CCDC85AQ96PX6 553 aaPredicted RBP18■□□□□ 0.47
CSNK1D-211ENST00000579316 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
CSNK1D-211ENST00000579316 ANKRD13AQ8IZ07 590 aa17.99■□□□□ 0.47
CSNK1D-211ENST00000579316 MS4A4AQ96JQ5 239 aa17.99■□□□□ 0.47
CSNK1D-211ENST00000579316 OTOFQ9HC10 1997 aa17.99■□□□□ 0.47
CSNK1D-211ENST00000579316 USP2O75604 605 aaPredicted RBP17.98■□□□□ 0.47
CSNK1D-211ENST00000579316 GOLGA2Q08379 1002 aa17.98■□□□□ 0.47
CSNK1D-211ENST00000579316 DLGAP5Q15398 846 aa17.98■□□□□ 0.47
CSNK1D-211ENST00000579316 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
CSNK1D-211ENST00000579316 SHISA4Q96DD7 197 aa17.98■□□□□ 0.47
CSNK1D-211ENST00000579316 CWC25Q9NXE8 425 aaPredicted RBP17.98■□□□□ 0.47
CSNK1D-211ENST00000579316 LEMD3Q9Y2U8 911 aa17.98■□□□□ 0.47
CSNK1D-211ENST00000579316 MNX1P50219 401 aaPredicted RBP17.97■□□□□ 0.47
CSNK1D-211ENST00000579316 CTSWP56202 376 aa17.97■□□□□ 0.47
CSNK1D-211ENST00000579316 BRI3BPQ8WY22 251 aa17.97■□□□□ 0.47
CSNK1D-211ENST00000579316 MYD88Q99836 296 aa17.97■□□□□ 0.47
CSNK1D-211ENST00000579316 ZFYVE28Q9HCC9 887 aa17.97■□□□□ 0.47
CSNK1D-211ENST00000579316 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.97■□□□□ 0.47
CSNK1D-211ENST00000579316 SPEF2Q9C093 1822 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms