RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 CSRNP1Q96S65 589 aa13.69□□□□□ -0.22
CSNK1D-210ENST00000579308 RNF186Q9NXI6 227 aa13.69□□□□□ -0.22
CSNK1D-210ENST00000579308 SCN9AQ15858 1988 aa13.69□□□□□ -0.22
CSNK1D-210ENST00000579308 PITPNM2Q9BZ72 1349 aa13.68□□□□□ -0.22
CSNK1D-210ENST00000579308 CASP7P55210 303 aa13.68□□□□□ -0.22
CSNK1D-210ENST00000579308 FKBP1BP68106 108 aa13.68□□□□□ -0.22
CSNK1D-210ENST00000579308 NEXNQ0ZGT2 675 aa13.68□□□□□ -0.22
CSNK1D-210ENST00000579308 TWISTNBQ3B726 338 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-210ENST00000579308 DACT2Q5SW24 774 aa13.68□□□□□ -0.22
CSNK1D-210ENST00000579308 PLA2G12BQ9BX93 195 aa13.68□□□□□ -0.22
CSNK1D-210ENST00000579308 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
CSNK1D-210ENST00000579308 MED23Q9ULK4 1368 aa13.68□□□□□ -0.22
CSNK1D-210ENST00000579308 IL16Q14005 1332 aa13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 CSF1RP07333 972 aa13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 CCT4P50991 539 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 DGKZQ13574 1117 aa13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 GCKRQ14397 625 aa13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 STRIP1Q5VSL9 837 aa13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 TXNRD3Q86VQ6 643 aa13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 MXD3Q9BW11 206 aa13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 COA1Q9GZY4 146 aa13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 LEMD3Q9Y2U8 911 aa13.67□□□□□ -0.22
CSNK1D-210ENST00000579308 TRPA1O75762 1119 aa13.66□□□□□ -0.22
CSNK1D-210ENST00000579308 NBPF9Q3BBW0 867 aa13.66□□□□□ -0.22
CSNK1D-210ENST00000579308 UBE3BQ7Z3V4 1068 aa13.66□□□□□ -0.22
CSNK1D-210ENST00000579308 RASAL3Q86YV0 1011 aa13.66□□□□□ -0.22
CSNK1D-210ENST00000579308 MMP14P50281 582 aa13.65□□□□□ -0.22
CSNK1D-210ENST00000579308 MLLT1Q03111 559 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-210ENST00000579308 FLIIQ13045 1269 aa13.65□□□□□ -0.22
CSNK1D-210ENST00000579308 REM2Q8IYK8 340 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-210ENST00000579308 SCAF8Q9UPN6 1271 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-210ENST00000579308 WNT10BO00744 389 aa13.64□□□□□ -0.23
CSNK1D-210ENST00000579308 VAMP4O75379 141 aa13.64□□□□□ -0.23
CSNK1D-210ENST00000579308 ITGA6P23229 1130 aa13.64□□□□□ -0.23
CSNK1D-210ENST00000579308 KLRK1P26718 216 aa13.64□□□□□ -0.23
CSNK1D-210ENST00000579308 IGHMBP2P38935 993 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-210ENST00000579308 PRAMEF18Q5VWM3 479 aa13.64□□□□□ -0.23
CSNK1D-210ENST00000579308 MOB2Q70IA6 237 aa13.64□□□□□ -0.23
CSNK1D-210ENST00000579308 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
CSNK1D-210ENST00000579308 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-210ENST00000579308 ZNF804BA4D1E1 1349 aa13.64□□□□□ -0.23
CSNK1D-210ENST00000579308 POLR2AP24928 1970 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-210ENST00000579308 UBE2Q2LH0YL09 131 aa13.63□□□□□ -0.23
CSNK1D-210ENST00000579308 OGFOD1Q8N543 542 aa13.63□□□□□ -0.23
CSNK1D-210ENST00000579308 LINS1Q8NG48 757 aa13.63□□□□□ -0.23
CSNK1D-210ENST00000579308 DNAAF4Q8WXU2 420 aa13.63□□□□□ -0.23
CSNK1D-210ENST00000579308 ZBED3Q96IU2 234 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-210ENST00000579308 ANKRD2Q9GZV1 360 aa13.63□□□□□ -0.23
CSNK1D-210ENST00000579308 MYO3BQ8WXR4 1341 aa13.63□□□□□ -0.23
CSNK1D-210ENST00000579308 IRS2Q9Y4H2 1338 aa13.63□□□□□ -0.23
CSNK1D-210ENST00000579308 CASP8AP2Q9UKL3 1982 aa13.62□□□□□ -0.23
CSNK1D-210ENST00000579308 TTLL5Q6EMB2 1281 aa13.62□□□□□ -0.23
CSNK1D-210ENST00000579308 WDR63Q8IWG1 891 aa13.62□□□□□ -0.23
CSNK1D-210ENST00000579308 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
CSNK1D-210ENST00000579308 FOXO4P98177 505 aa13.61□□□□□ -0.23
CSNK1D-210ENST00000579308 CHRNDQ07001 517 aa13.61□□□□□ -0.23
CSNK1D-210ENST00000579308 FKBP5Q13451 457 aaPredicted RBP13.61□□□□□ -0.23
CSNK1D-210ENST00000579308 C15orf52Q6ZUT6 534 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-210ENST00000579308 MPHOSPH8Q99549 860 aa13.61□□□□□ -0.23
CSNK1D-210ENST00000579308 MYH16Q9H6N6 1097 aa13.61□□□□□ -0.23
CSNK1D-210ENST00000579308 SNAP23O00161 211 aa13.6□□□□□ -0.23
CSNK1D-210ENST00000579308 TM4SF4P48230 202 aa13.6□□□□□ -0.23
CSNK1D-210ENST00000579308 GTF2IP78347 998 aa13.6□□□□□ -0.23
CSNK1D-210ENST00000579308 BEND3Q5T5X7 828 aa13.6□□□□□ -0.23
CSNK1D-210ENST00000579308 CD209Q9NNX6 404 aa13.6□□□□□ -0.23
CSNK1D-210ENST00000579308 SASH1O94885 1247 aa13.59□□□□□ -0.23
CSNK1D-210ENST00000579308 LDLRAD1Q5T700 205 aa13.59□□□□□ -0.23
CSNK1D-210ENST00000579308 CTU1Q7Z7A3 348 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-210ENST00000579308 KIAA0825Q8IV33 1275 aa13.59□□□□□ -0.23
CSNK1D-210ENST00000579308 CERS5Q8N5B7 392 aa13.59□□□□□ -0.23
CSNK1D-210ENST00000579308 FBXW7Q969H0 707 aa13.59□□□□□ -0.23
CSNK1D-210ENST00000579308 ANKRD18BA2A2Z9 1011 aa13.58□□□□□ -0.24
CSNK1D-210ENST00000579308 TAF5LO75529 589 aa13.58□□□□□ -0.24
CSNK1D-210ENST00000579308 PTPN12Q05209 780 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-210ENST00000579308 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-210ENST00000579308 MTMR14Q8NCE2 650 aa13.58□□□□□ -0.24
CSNK1D-210ENST00000579308 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-210ENST00000579308 PAPPA2Q9BXP8 1791 aa13.58□□□□□ -0.24
CSNK1D-210ENST00000579308 PSME4Q14997 1843 aa13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 F6X3S4 739 aa13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 SLC34A2O95436 690 aa13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 TBC1D8O95759 1140 aa13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 IL1R1P14778 569 aa13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 NF2P35240 595 aa13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 IFIT5Q13325 482 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 NOM1Q5C9Z4 860 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 EPHA10Q5JZY3 1008 aa13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 HELBQ8NG08 1087 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 HDAC9Q9UKV0 1011 aa13.57□□□□□ -0.24
CSNK1D-210ENST00000579308 KCNJ4P48050 445 aa13.56□□□□□ -0.24
CSNK1D-210ENST00000579308 FKBP1AP62942 108 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-210ENST00000579308 TTLL12Q14166 644 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-210ENST00000579308 ARMC9Q7Z3E5 817 aa13.56□□□□□ -0.24
CSNK1D-210ENST00000579308 ZNF296Q8WUU4 475 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-210ENST00000579308 CFHR5Q9BXR6 569 aa13.56□□□□□ -0.24
CSNK1D-210ENST00000579308 DEFB129Q9H1M3 183 aa13.56□□□□□ -0.24
CSNK1D-210ENST00000579308 MRS2Q9HD23 443 aa13.56□□□□□ -0.24
CSNK1D-210ENST00000579308 SALL2Q9Y467 1007 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms