RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 SCARF1Q14162 830 aa11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 ANGEL2Q5VTE6 544 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 C2orf69Q8N8R5 385 aa11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 MXD3Q9BW11 206 aa11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 PLA2G12BQ9BX93 195 aa11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 GBA2Q9HCG7 927 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 MYOZ2Q9NPC6 264 aa11.71□□□□□ -0.53
CDK5RAP3-211ENST00000578996 ZNF804BA4D1E1 1349 aa11.7□□□□□ -0.54
CDK5RAP3-211ENST00000578996 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
CDK5RAP3-211ENST00000578996 MAP2K2P36507 400 aa11.7□□□□□ -0.54
CDK5RAP3-211ENST00000578996 CASP7P55210 303 aa11.7□□□□□ -0.54
CDK5RAP3-211ENST00000578996 HHIPL1Q96JK4 782 aa11.7□□□□□ -0.54
CDK5RAP3-211ENST00000578996 ANKRD2Q9GZV1 360 aa11.7□□□□□ -0.54
CDK5RAP3-211ENST00000578996 COA1Q9GZY4 146 aa11.7□□□□□ -0.54
CDK5RAP3-211ENST00000578996 LEMD3Q9Y2U8 911 aa11.7□□□□□ -0.54
CDK5RAP3-211ENST00000578996 CSF1RP07333 972 aa11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 KLRK1P26718 216 aa11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 ZNF280AP59817 542 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 CHRNDQ07001 517 aa11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 IFIT5Q13325 482 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 TAF7LQ5H9L4 462 aa11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 BEND3Q5T5X7 828 aa11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 TXNRD3Q86VQ6 643 aa11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 OGFOD1Q8N543 542 aa11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 CDCA5Q96FF9 252 aa11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 SCAF8Q9UPN6 1271 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-211ENST00000578996 TAF5LO75529 589 aa11.68□□□□□ -0.54
CDK5RAP3-211ENST00000578996 ZNF157P51786 506 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-211ENST00000578996 FOXO4P98177 505 aa11.68□□□□□ -0.54
CDK5RAP3-211ENST00000578996 NOGQ13253 232 aa11.68□□□□□ -0.54
CDK5RAP3-211ENST00000578996 DACT2Q5SW24 774 aa11.68□□□□□ -0.54
CDK5RAP3-211ENST00000578996 RGMBQ6NW40 437 aa11.68□□□□□ -0.54
CDK5RAP3-211ENST00000578996 HELBQ8NG08 1087 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-211ENST00000578996 GMLQ99445 158 aa11.68□□□□□ -0.54
CDK5RAP3-211ENST00000578996 C9orf78Q9NZ63 289 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-211ENST00000578996 ZNF609O15014 1411 aa11.68□□□□□ -0.54
CDK5RAP3-211ENST00000578996 MYO3BQ8WXR4 1341 aa11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 SNAP23O00161 211 aa11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 GRM8O00222 908 aa11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 PLIN1O60240 522 aa11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 BRPF1P55201 1214 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 GTF2IP78347 998 aa11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 CCDC57Q2TAC2 916 aa11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 STRIP1Q5VSL9 837 aa11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 TTLL5Q6EMB2 1281 aa11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 LMBR1LQ6UX01 489 aa11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 ZIC5Q96T25 663 aa11.67□□□□□ -0.54
CDK5RAP3-211ENST00000578996 PSME4Q14997 1843 aa11.66□□□□□ -0.54
CDK5RAP3-211ENST00000578996 SASH1O94885 1247 aa11.66□□□□□ -0.54
CDK5RAP3-211ENST00000578996 NBPF9Q3BBW0 867 aa11.66□□□□□ -0.54
CDK5RAP3-211ENST00000578996 KIAA0825Q8IV33 1275 aa11.66□□□□□ -0.54
CDK5RAP3-211ENST00000578996 ZNF594Q96JF6 807 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-211ENST00000578996 SRCIN1Q9C0H9 1055 aa11.66□□□□□ -0.54
CDK5RAP3-211ENST00000578996 CNNM1Q9NRU3 951 aa11.66□□□□□ -0.54
CDK5RAP3-211ENST00000578996 HDAC9Q9UKV0 1011 aa11.66□□□□□ -0.54
CDK5RAP3-211ENST00000578996 PITPNM2Q9BZ72 1349 aa11.65□□□□□ -0.54
CDK5RAP3-211ENST00000578996 CA12O43570 354 aa11.65□□□□□ -0.54
CDK5RAP3-211ENST00000578996 TTLL12Q14166 644 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-211ENST00000578996 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.54
CDK5RAP3-211ENST00000578996 PRAMEF18Q5VWM3 479 aa11.65□□□□□ -0.54
CDK5RAP3-211ENST00000578996 LDHAL6AQ6ZMR3 332 aa11.65□□□□□ -0.54
CDK5RAP3-211ENST00000578996 CCDC102AQ96A19 550 aa11.65□□□□□ -0.54
CDK5RAP3-211ENST00000578996 CD209Q9NNX6 404 aa11.65□□□□□ -0.54
CDK5RAP3-211ENST00000578996 FAM155AB1AL88 458 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-211ENST00000578996 F8W031 263 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-211ENST00000578996 WNT10BO00744 389 aa11.64□□□□□ -0.55
CDK5RAP3-211ENST00000578996 ALDH1L1O75891 902 aa11.64□□□□□ -0.55
CDK5RAP3-211ENST00000578996 KIF23Q02241 960 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-211ENST00000578996 MOB2Q70IA6 237 aa11.64□□□□□ -0.55
CDK5RAP3-211ENST00000578996 ZNF804AQ7Z570 1209 aa11.64□□□□□ -0.55
CDK5RAP3-211ENST00000578996 ABHD8Q96I13 439 aa11.64□□□□□ -0.55
CDK5RAP3-211ENST00000578996 SUCLG2Q96I99 432 aa11.64□□□□□ -0.55
CDK5RAP3-211ENST00000578996 JAG2Q9Y219 1238 aa11.64□□□□□ -0.55
CDK5RAP3-211ENST00000578996 ZNF521Q96K83 1311 aa11.63□□□□□ -0.55
CDK5RAP3-211ENST00000578996 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
CDK5RAP3-211ENST00000578996 SLC10A3P09131 477 aa11.63□□□□□ -0.55
CDK5RAP3-211ENST00000578996 NF2P35240 595 aa11.63□□□□□ -0.55
CDK5RAP3-211ENST00000578996 POLR2AP24928 1970 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-211ENST00000578996 E9PSI1 815 aa11.62□□□□□ -0.55
CDK5RAP3-211ENST00000578996 NBPF7P0C2Y1 421 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-211ENST00000578996 PRKG1Q13976 671 aa11.62□□□□□ -0.55
CDK5RAP3-211ENST00000578996 RASAL3Q86YV0 1011 aa11.62□□□□□ -0.55
CDK5RAP3-211ENST00000578996 MRPL50Q8N5N7 158 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-211ENST00000578996 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-211ENST00000578996 PAPPA2Q9BXP8 1791 aa11.62□□□□□ -0.55
CDK5RAP3-211ENST00000578996 ZNF646O15015 1829 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 CCDC85CA6NKD9 419 aa11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 UBE2Q2LH0YL09 131 aa11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 TRPA1O75762 1119 aa11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 FKBP1BP68106 108 aa11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 DLGAP5Q15398 846 aa11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 APOBEC3FQ8IUX4 373 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 CERS5Q8N5B7 392 aa11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 PUS3Q9BZE2 481 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 BICC1Q9H694 974 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-211ENST00000578996 PTPRCP08575 1304 aa11.6□□□□□ -0.55
CDK5RAP3-211ENST00000578996 IRS2Q9Y4H2 1338 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms