RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 UBR2Q8IWV8 1755 aa5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 NUTM2BA6NNL0 878 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 NUTM2EB1AL46 878 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 GPC1P35052 558 aa5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 ZC3H6P61129 1189 aaKnown RBP5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 DDX10Q13206 875 aaKnown RBP5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 CHRNA2Q15822 529 aa5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 RSBN1LQ6PCB5 846 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 POTEAQ6S8J7 498 aa5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 NUTM2AQ8IVF1 878 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 KDF1Q8NAX2 398 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 ZNF784Q8NCA9 323 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 KCNH5Q8NCM2 988 aa5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 POLR3GLQ9BT43 218 aa5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 POLKQ9UBT6 870 aa5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 CICQ96RK0 1608 aaPredicted RBP5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 TUBGCP6Q96RT7 1819 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 SPATA31C1P0DKV0 1188 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 HOXC9P31274 260 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 FZD5Q13467 585 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 RRS1Q15050 365 aaKnown RBP5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 DIXDC1Q155Q3 683 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 IP6K1Q92551 441 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 COG3Q96JB2 828 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 C8orf37Q96NL8 207 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 ARHGAP9Q9BRR9 750 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 TSHZ2Q9NRE2 1034 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 TMPRSS4Q9NRS4 437 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 PCDHB15Q9Y5E8 787 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 SPATA31A1Q5TZJ5 1347 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 SPATA31A5Q5VU36 1347 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 SPATA31A7Q8IWB4 1347 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 WDR17Q8IZU2 1322 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 KDM3BQ7LBC6 1761 aa5.19□□□□□ -1.58
SMARCE1-215ENST00000578995 ZNF831Q5JPB2 1677 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 KDRP35968 1356 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 NUP188Q5SRE5 1749 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 OVOS2A0A0G2JMS6 1433 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 TNS2Q63HR2 1409 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 LILRA1O75019 489 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 F11P03951 625 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 VPS72Q15906 364 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 HSP90AB2PQ58FF8 381 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 CC2D1BQ5T0F9 858 aaKnown RBP5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 PDXDC2PQ6P474 469 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 UNC5CLQ8IV45 518 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 TSC1Q92574 1164 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 PRDM11Q9NQV5 511 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 BTG4Q9NY30 223 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 GGA1Q9UJY5 639 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 KNSTRNQ9Y448 316 aa5.18□□□□□ -1.58
SMARCE1-215ENST00000578995 COL5A3P25940 1745 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 EPXP11678 715 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 BMP4P12644 408 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 PPP2R1AP30153 589 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 ADD1P35611 737 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 WDR44Q5JSH3 913 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 LARP1Q6PKG0 1096 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 ZBTB33Q86T24 672 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 NGLY1Q96IV0 654 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 FMNL2Q96PY5 1086 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 PRKRIP1Q9H875 184 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 USP21Q9UK80 565 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 KAT6BQ8WYB5 2073 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 IGSF1Q8N6C5 1336 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 QSER1Q2KHR3 1735 aa5.17□□□□□ -1.58
SMARCE1-215ENST00000578995 PLEKHG2Q9H7P9 1386 aa5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 MRC1P22897 1456 aa5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 IL13P35225 146 aa5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 POU4F2Q12837 409 aa5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 EIF4A2Q14240 407 aaKnown RBP5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 NBPF20Q3BBV1 942 aa5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 ILDR2Q71H61 639 aa5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 MORC1Q86VD1 984 aa5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 ANKRD24Q8TF21 1146 aa5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 GJD4Q96KN9 370 aaPredicted RBP5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 TJP1Q07157 1748 aa5.16□□□□□ -1.58
SMARCE1-215ENST00000578995 BCL9O00512 1426 aa5.15□□□□□ -1.58
SMARCE1-215ENST00000578995 C5P01031 1676 aa5.15□□□□□ -1.58
SMARCE1-215ENST00000578995 COL24A1Q17RW2 1714 aa5.15□□□□□ -1.58
SMARCE1-215ENST00000578995 LAMB4A4D0S4 1761 aa5.15□□□□□ -1.58
SMARCE1-215ENST00000578995 APBA3O96018 575 aa5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 TNNT2P45379 298 aaPredicted RBP5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 MTHFSP49914 203 aa5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 CCDC184Q52MB2 194 aa5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 SLC27A3Q5K4L6 730 aa5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 NBPF6Q5VWK0 638 aa5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 ZNF772Q68DY9 489 aaPredicted RBP5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 BARGINQ6ZT62 677 aa5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 NBPF4Q96M43 638 aa5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 CARD10Q9BWT7 1032 aa5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 TIMMDC1Q9NPL8 285 aa5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 TRPC5Q9UL62 973 aaPredicted RBP5.15□□□□□ -1.59
SMARCE1-215ENST00000578995 UBR3Q6ZT12 1888 aa5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 HAP1P54257 671 aaPredicted RBP5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 RBM6P78332 1123 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 LAMC2Q13753 1193 aa5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 RALBP1Q15311 655 aa5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 MEX3CQ5U5Q3 659 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-215ENST00000578995 NBPF10Q6P3W6 841 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms