RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 G3BP1Q13283 466 aaKnown RBP eCLIP19.09■□□□□ 0.65
IFT20-208ENST00000578985 GPBP1L1Q9HC44 474 aaPredicted RBP19.09■□□□□ 0.65
IFT20-208ENST00000578985 SCN9AQ15858 1988 aa19.09■□□□□ 0.65
IFT20-208ENST00000578985 RAD17O75943 681 aa19.08■□□□□ 0.64
IFT20-208ENST00000578985 PUM3Q15397 648 aaKnown RBP19.08■□□□□ 0.64
IFT20-208ENST00000578985 CIAPIN1Q6FI81 312 aa19.08■□□□□ 0.64
IFT20-208ENST00000578985 COA1Q9GZY4 146 aa19.08■□□□□ 0.64
IFT20-208ENST00000578985 GJA3Q9Y6H8 435 aa19.08■□□□□ 0.64
IFT20-208ENST00000578985 HMMRO75330 724 aa19.07■□□□□ 0.64
IFT20-208ENST00000578985 SURF6O75683 361 aaKnown RBP19.07■□□□□ 0.64
IFT20-208ENST00000578985 TNIP1Q15025 636 aa19.07■□□□□ 0.64
IFT20-208ENST00000578985 GPC2Q8N158 579 aa19.07■□□□□ 0.64
IFT20-208ENST00000578985 WDR90Q96KV7 1748 aa19.07■□□□□ 0.64
IFT20-208ENST00000578985 PSME4Q14997 1843 aa19.07■□□□□ 0.64
IFT20-208ENST00000578985 FGFR2P21802 821 aa19.06■□□□□ 0.64
IFT20-208ENST00000578985 OS9Q13438 667 aaPredicted RBP19.06■□□□□ 0.64
IFT20-208ENST00000578985 ZNF804AQ7Z570 1209 aa19.06■□□□□ 0.64
IFT20-208ENST00000578985 PODNQ7Z5L7 613 aa19.06■□□□□ 0.64
IFT20-208ENST00000578985 SIRT2Q8IXJ6 389 aa19.06■□□□□ 0.64
IFT20-208ENST00000578985 RRAGCQ9HB90 399 aa19.06■□□□□ 0.64
IFT20-208ENST00000578985 NMRK2Q9NPI5 230 aa19.06■□□□□ 0.64
IFT20-208ENST00000578985 KCNQ5Q9NR82 932 aa19.06■□□□□ 0.64
IFT20-208ENST00000578985 NOP58Q9Y2X3 529 aaKnown RBP19.06■□□□□ 0.64
IFT20-208ENST00000578985 IFIT1P09914 478 aaKnown RBP19.05■□□□□ 0.64
IFT20-208ENST00000578985 SLC5A1P13866 664 aa19.05■□□□□ 0.64
IFT20-208ENST00000578985 TFCP2Q12800 502 aa19.05■□□□□ 0.64
IFT20-208ENST00000578985 ATP2B3Q16720 1220 aa19.05■□□□□ 0.64
IFT20-208ENST00000578985 LPIN2Q92539 896 aa19.05■□□□□ 0.64
IFT20-208ENST00000578985 CD209Q9NNX6 404 aa19.05■□□□□ 0.64
IFT20-208ENST00000578985 PSMD14O00487 310 aa19.04■□□□□ 0.64
IFT20-208ENST00000578985 GYG1P46976 350 aa19.04■□□□□ 0.64
IFT20-208ENST00000578985 L3MBTL3Q96JM7 780 aaPredicted RBP19.04■□□□□ 0.64
IFT20-208ENST00000578985 FAM84BQ96KN1 310 aaPredicted RBP19.04■□□□□ 0.64
IFT20-208ENST00000578985 SCN4AP35499 1836 aa19.04■□□□□ 0.64
IFT20-208ENST00000578985 SASH1O94885 1247 aa19.03■□□□□ 0.64
IFT20-208ENST00000578985 HIBADHP31937 336 aaKnown RBP19.03■□□□□ 0.64
IFT20-208ENST00000578985 FBXO33Q7Z6M2 555 aa19.03■□□□□ 0.64
IFT20-208ENST00000578985 AKAP2Q9Y2D5 859 aa19.03■□□□□ 0.64
IFT20-208ENST00000578985 USP17L3A6NCW0 530 aa19.02■□□□□ 0.64
IFT20-208ENST00000578985 USP17L4A6NCW7 530 aa19.02■□□□□ 0.64
IFT20-208ENST00000578985 IL1R1P14778 569 aa19.02■□□□□ 0.64
IFT20-208ENST00000578985 VEGFAP15692 232 aaPredicted RBP19.02■□□□□ 0.64
IFT20-208ENST00000578985 C1QTNF8P60827 252 aa19.02■□□□□ 0.64
IFT20-208ENST00000578985 CAVIN4Q5BKX8 364 aa19.02■□□□□ 0.64
IFT20-208ENST00000578985 USP17L1Q7RTZ2 530 aa19.02■□□□□ 0.64
IFT20-208ENST00000578985 VPS37DQ86XT2 251 aa19.02■□□□□ 0.64
IFT20-208ENST00000578985 EXOC6BQ9Y2D4 811 aa19.02■□□□□ 0.64
IFT20-208ENST00000578985 POTECB2RU33 542 aa19.01■□□□□ 0.63
IFT20-208ENST00000578985 VIL1P09327 827 aaKnown RBP19.01■□□□□ 0.63
IFT20-208ENST00000578985 GMPSP49915 693 aaPredicted RBP19.01■□□□□ 0.63
IFT20-208ENST00000578985 HSP90AB4PQ58FF6 505 aa19.01■□□□□ 0.63
IFT20-208ENST00000578985 FBXW7Q969H0 707 aa19.01■□□□□ 0.63
IFT20-208ENST00000578985 PCDHB15Q9Y5E8 787 aa19.01■□□□□ 0.63
IFT20-208ENST00000578985 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.01■□□□□ 0.63
IFT20-208ENST00000578985 ARAP2Q8WZ64 1704 aa19■□□□□ 0.63
IFT20-208ENST00000578985 ZNF646O15015 1829 aaPredicted RBP19■□□□□ 0.63
IFT20-208ENST00000578985 IQCA1LA6NCM1 817 aa19■□□□□ 0.63
IFT20-208ENST00000578985 LMOD1P29536 600 aaPredicted RBP19■□□□□ 0.63
IFT20-208ENST00000578985 BCAMP50895 628 aa19■□□□□ 0.63
IFT20-208ENST00000578985 TIMM10P62072 90 aa19■□□□□ 0.63
IFT20-208ENST00000578985 AAMPQ13685 434 aa19■□□□□ 0.63
IFT20-208ENST00000578985 ERC1Q8IUD2 1116 aa19■□□□□ 0.63
IFT20-208ENST00000578985 TDRD7Q8NHU6 1098 aaKnown RBP19■□□□□ 0.63
IFT20-208ENST00000578985 EXOC6Q8TAG9 804 aa19■□□□□ 0.63
IFT20-208ENST00000578985 HACL1Q9UJ83 578 aa19■□□□□ 0.63
IFT20-208ENST00000578985 ZBTB12Q9Y330 459 aaPredicted RBP19■□□□□ 0.63
IFT20-208ENST00000578985 A0A1B0GUL7 405 aa18.99■□□□□ 0.63
IFT20-208ENST00000578985 KIF3CO14782 793 aa18.99■□□□□ 0.63
IFT20-208ENST00000578985 SCNN1DP51172 638 aa18.99■□□□□ 0.63
IFT20-208ENST00000578985 GTF2IP78347 998 aa18.99■□□□□ 0.63
IFT20-208ENST00000578985 STRIP1Q5VSL9 837 aa18.99■□□□□ 0.63
IFT20-208ENST00000578985 TTLL5Q6EMB2 1281 aa18.99■□□□□ 0.63
IFT20-208ENST00000578985 RSBN1LQ6PCB5 846 aaPredicted RBP18.99■□□□□ 0.63
IFT20-208ENST00000578985 GPR108Q9NPR9 543 aa18.99■□□□□ 0.63
IFT20-208ENST00000578985 MYH13Q9UKX3 1938 aa18.99■□□□□ 0.63
IFT20-208ENST00000578985 RPS12P25398 132 aaKnown RBP18.98■□□□□ 0.63
IFT20-208ENST00000578985 ADORA1P30542 326 aa18.98■□□□□ 0.63
IFT20-208ENST00000578985 IRX6P78412 446 aaPredicted RBP18.98■□□□□ 0.63
IFT20-208ENST00000578985 DACT2Q5SW24 774 aa18.98■□□□□ 0.63
IFT20-208ENST00000578985 DPF2Q92785 391 aa18.98■□□□□ 0.63
IFT20-208ENST00000578985 XAGE2Q96GT9 111 aa18.98■□□□□ 0.63
IFT20-208ENST00000578985 NEUROD6Q96NK8 337 aa18.98■□□□□ 0.63
IFT20-208ENST00000578985 GPRC5DQ9NZD1 345 aa18.98■□□□□ 0.63
IFT20-208ENST00000578985 ZNF609O15014 1411 aa18.98■□□□□ 0.63
IFT20-208ENST00000578985 RAB11FIP3O75154 756 aa18.97■□□□□ 0.63
IFT20-208ENST00000578985 EPS15P42566 896 aa18.97■□□□□ 0.63
IFT20-208ENST00000578985 TNNI3KQ59H18 835 aa18.97■□□□□ 0.63
IFT20-208ENST00000578985 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
IFT20-208ENST00000578985 AGBL3Q8NEM8 1001 aa18.97■□□□□ 0.63
IFT20-208ENST00000578985 MXD3Q9BW11 206 aa18.97■□□□□ 0.63
IFT20-208ENST00000578985 TAF1DQ9H5J8 278 aaPredicted RBP18.97■□□□□ 0.63
IFT20-208ENST00000578985 CNOT7Q9UIV1 285 aaKnown RBP18.97■□□□□ 0.63
IFT20-208ENST00000578985 IQSEC3Q9UPP2 1182 aaPredicted RBP18.97■□□□□ 0.63
IFT20-208ENST00000578985 FPGT-TNNI3KV9GXZ4 949 aa18.97■□□□□ 0.63
IFT20-208ENST00000578985 FAM205AQ6ZU69 1335 aa18.97■□□□□ 0.63
IFT20-208ENST00000578985 APBB1O00213 710 aa18.96■□□□□ 0.63
IFT20-208ENST00000578985 FRAT2O75474 233 aaPredicted RBP18.96■□□□□ 0.63
IFT20-208ENST00000578985 EPHX2P34913 555 aa18.96■□□□□ 0.63
IFT20-208ENST00000578985 RHPN1Q8TCX5 695 aa18.96■□□□□ 0.63
IFT20-208ENST00000578985 GMLQ99445 158 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms