RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 GPSM2P81274 684 aa11.66□□□□□ -0.54
SNX11-205ENST00000578861 KIF22Q14807 665 aa11.66□□□□□ -0.54
SNX11-205ENST00000578861 TAF7Q15545 349 aaPredicted RBP11.66□□□□□ -0.54
SNX11-205ENST00000578861 SLC10A5Q5PT55 438 aa11.66□□□□□ -0.54
SNX11-205ENST00000578861 KDM3BQ7LBC6 1761 aa11.66□□□□□ -0.54
SNX11-205ENST00000578861 HTATSF1O43719 755 aaKnown RBP11.65□□□□□ -0.54
SNX11-205ENST00000578861 ZNF428Q96B54 188 aa11.65□□□□□ -0.54
SNX11-205ENST00000578861 PTPN18Q99952 460 aa11.65□□□□□ -0.54
SNX11-205ENST00000578861 ARHGAP39Q9C0H5 1083 aa11.65□□□□□ -0.54
SNX11-205ENST00000578861 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
SNX11-205ENST00000578861 IBTKQ9P2D0 1353 aaPredicted RBP11.65□□□□□ -0.55
SNX11-205ENST00000578861 NEFMP07197 916 aa11.64□□□□□ -0.55
SNX11-205ENST00000578861 CCL5P13501 91 aa11.64□□□□□ -0.55
SNX11-205ENST00000578861 GJA8P48165 433 aa11.64□□□□□ -0.55
SNX11-205ENST00000578861 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
SNX11-205ENST00000578861 PARP10Q53GL7 1025 aa11.64□□□□□ -0.55
SNX11-205ENST00000578861 TMC4Q7Z404 712 aa11.64□□□□□ -0.55
SNX11-205ENST00000578861 UBE2Q1Q7Z7E8 422 aa11.64□□□□□ -0.55
SNX11-205ENST00000578861 ZFYVE28Q9HCC9 887 aa11.64□□□□□ -0.55
SNX11-205ENST00000578861 ZMYND8Q9ULU4 1186 aaPredicted RBP11.64□□□□□ -0.55
SNX11-205ENST00000578861 VCANP13611 3396 aa11.64□□□□□ -0.55
SNX11-205ENST00000578861 SASH1O94885 1247 aa11.63□□□□□ -0.55
SNX11-205ENST00000578861 GJB1P08034 283 aa11.63□□□□□ -0.55
SNX11-205ENST00000578861 LRIT3Q3SXY7 679 aa11.63□□□□□ -0.55
SNX11-205ENST00000578861 TBC1D16Q8TBP0 767 aa11.63□□□□□ -0.55
SNX11-205ENST00000578861 SYMPKQ92797 1274 aaKnown RBP11.63□□□□□ -0.55
SNX11-205ENST00000578861 GDF15Q99988 308 aa11.63□□□□□ -0.55
SNX11-205ENST00000578861 THUMPD2Q9BTF0 503 aaKnown RBP11.63□□□□□ -0.55
SNX11-205ENST00000578861 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
SNX11-205ENST00000578861 BMP8BP34820 402 aa11.62□□□□□ -0.55
SNX11-205ENST00000578861 GIGYF2Q6Y7W6 1299 aaKnown RBP11.62□□□□□ -0.55
SNX11-205ENST00000578861 C7orf61Q8IZ16 206 aa11.62□□□□□ -0.55
SNX11-205ENST00000578861 OGFOD1Q8N543 542 aa11.62□□□□□ -0.55
SNX11-205ENST00000578861 NECTIN2Q92692 538 aa11.62□□□□□ -0.55
SNX11-205ENST00000578861 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
SNX11-205ENST00000578861 GUCD1Q96NT3 240 aa11.62□□□□□ -0.55
SNX11-205ENST00000578861 WNT10BO00744 389 aa11.61□□□□□ -0.55
SNX11-205ENST00000578861 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
SNX11-205ENST00000578861 TFRCP02786 760 aaKnown RBP11.61□□□□□ -0.55
SNX11-205ENST00000578861 SYN1P17600 705 aa11.61□□□□□ -0.55
SNX11-205ENST00000578861 GJA5P36382 358 aa11.61□□□□□ -0.55
SNX11-205ENST00000578861 TDHQ8IZJ6 230 aa11.61□□□□□ -0.55
SNX11-205ENST00000578861 RAET1EQ8TD07 263 aa11.61□□□□□ -0.55
SNX11-205ENST00000578861 U2AF1L4Q8WU68 220 aaKnown RBP11.61□□□□□ -0.55
SNX11-205ENST00000578861 GMLQ99445 158 aa11.61□□□□□ -0.55
SNX11-205ENST00000578861 TRMT112Q9UI30 125 aaKnown RBP11.61□□□□□ -0.55
SNX11-205ENST00000578861 USP17L3A6NCW0 530 aa11.6□□□□□ -0.55
SNX11-205ENST00000578861 USP17L4A6NCW7 530 aa11.6□□□□□ -0.55
SNX11-205ENST00000578861 TNFRSF10AO00220 468 aa11.6□□□□□ -0.55
SNX11-205ENST00000578861 UFL1O94874 794 aa11.6□□□□□ -0.55
SNX11-205ENST00000578861 GRK4P32298 578 aa11.6□□□□□ -0.55
SNX11-205ENST00000578861 NFE2L2Q16236 605 aa11.6□□□□□ -0.55
SNX11-205ENST00000578861 USP17L1Q7RTZ2 530 aa11.6□□□□□ -0.55
SNX11-205ENST00000578861 MAFAQ8NHW3 353 aaPredicted RBP11.6□□□□□ -0.55
SNX11-205ENST00000578861 PNISRQ8TF01 805 aaKnown RBP11.6□□□□□ -0.55
SNX11-205ENST00000578861 CELF1Q92879 486 aaKnown RBP11.6□□□□□ -0.55
SNX11-205ENST00000578861 MXD3Q9BW11 206 aa11.6□□□□□ -0.55
SNX11-205ENST00000578861 UBE2OQ9C0C9 1292 aaKnown RBP11.6□□□□□ -0.55
SNX11-205ENST00000578861 ANKIB1Q9P2G1 1089 aa11.6□□□□□ -0.55
SNX11-205ENST00000578861 TTC28Q96AY4 2481 aa11.6□□□□□ -0.55
SNX11-205ENST00000578861 DUOX1Q9NRD9 1551 aa11.59□□□□□ -0.55
SNX11-205ENST00000578861 WDHD1O75717 1129 aaPredicted RBP11.59□□□□□ -0.55
SNX11-205ENST00000578861 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
SNX11-205ENST00000578861 LACTBP83111 547 aaPredicted RBP11.59□□□□□ -0.55
SNX11-205ENST00000578861 MAP3K12Q12852 859 aa11.59□□□□□ -0.55
SNX11-205ENST00000578861 APOBEC3FQ8IUX4 373 aaKnown RBP11.59□□□□□ -0.55
SNX11-205ENST00000578861 PLEKHF1Q96S99 279 aa11.59□□□□□ -0.55
SNX11-205ENST00000578861 RIPOR2Q9Y4F9 1068 aa11.59□□□□□ -0.55
SNX11-205ENST00000578861 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
SNX11-205ENST00000578861 MAGEA10P43363 369 aaPredicted RBP11.58□□□□□ -0.56
SNX11-205ENST00000578861 UBXN2AP68543 259 aa11.58□□□□□ -0.56
SNX11-205ENST00000578861 TRIM47Q96LD4 638 aa11.58□□□□□ -0.56
SNX11-205ENST00000578861 DEFB129Q9H1M3 183 aa11.58□□□□□ -0.56
SNX11-205ENST00000578861 ELP3Q9H9T3 547 aa11.58□□□□□ -0.56
SNX11-205ENST00000578861 TAF1P21675 1872 aa11.57□□□□□ -0.56
SNX11-205ENST00000578861 LAMB2P55268 1798 aa11.57□□□□□ -0.56
SNX11-205ENST00000578861 CCL15-CCL14A0A0B4J2E2 113 aa11.57□□□□□ -0.56
SNX11-205ENST00000578861 FMNL1O95466 1100 aaPredicted RBP11.57□□□□□ -0.56
SNX11-205ENST00000578861 IREB2P48200 963 aaKnown RBP11.57□□□□□ -0.56
SNX11-205ENST00000578861 PRMT2P55345 433 aa11.57□□□□□ -0.56
SNX11-205ENST00000578861 CCL15Q16663 113 aa11.57□□□□□ -0.56
SNX11-205ENST00000578861 BRI3BPQ8WY22 251 aa11.57□□□□□ -0.56
SNX11-205ENST00000578861 OPTNQ96CV9 577 aa11.57□□□□□ -0.56
SNX11-205ENST00000578861 UNC93B1Q9H1C4 597 aa11.57□□□□□ -0.56
SNX11-205ENST00000578861 GGA1Q9UJY5 639 aa11.57□□□□□ -0.56
SNX11-205ENST00000578861 SH3TC1Q8TE82 1336 aa11.57□□□□□ -0.56
SNX11-205ENST00000578861 TESPA1A2RU30 521 aaPredicted RBP11.56□□□□□ -0.56
SNX11-205ENST00000578861 SGPL1O95470 568 aa11.56□□□□□ -0.56
SNX11-205ENST00000578861 GNRH1P01148 92 aa11.56□□□□□ -0.56
SNX11-205ENST00000578861 EIF2S2P20042 333 aaKnown RBP11.56□□□□□ -0.56
SNX11-205ENST00000578861 HOXD10P28358 340 aa11.56□□□□□ -0.56
SNX11-205ENST00000578861 PSMC4P43686 418 aa11.56□□□□□ -0.56
SNX11-205ENST00000578861 FAM43AQ8N2R8 423 aa11.56□□□□□ -0.56
SNX11-205ENST00000578861 PAWRQ96IZ0 340 aaKnown RBP11.56□□□□□ -0.56
SNX11-205ENST00000578861 SRRDQ9UH36 339 aa11.56□□□□□ -0.56
SNX11-205ENST00000578861 TSPYL4Q9UJ04 414 aa11.56□□□□□ -0.56
SNX11-205ENST00000578861 ANKRD36CQ5JPF3 1778 aa11.56□□□□□ -0.56
SNX11-205ENST00000578861 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
SNX11-205ENST00000578861 ANXA1P04083 346 aa11.55□□□□□ -0.56
SNX11-205ENST00000578861 MAP3K11Q16584 847 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms