RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 ALDH1L1O75891 902 aa20.14■□□□□ 0.81
CRLF3-203ENST00000578692 ZNF280AP59817 542 aaPredicted RBP20.14■□□□□ 0.81
CRLF3-203ENST00000578692 CHRNDQ07001 517 aa20.14■□□□□ 0.81
CRLF3-203ENST00000578692 DLK2Q6UY11 383 aa20.14■□□□□ 0.81
CRLF3-203ENST00000578692 TXNRD3Q86VQ6 643 aa20.14■□□□□ 0.81
CRLF3-203ENST00000578692 COA1Q9GZY4 146 aa20.14■□□□□ 0.81
CRLF3-203ENST00000578692 CHMP3Q9Y3E7 222 aa20.14■□□□□ 0.81
CRLF3-203ENST00000578692 ZNF609O15014 1411 aa20.14■□□□□ 0.81
CRLF3-203ENST00000578692 PSME4Q14997 1843 aa20.13■□□□□ 0.81
CRLF3-203ENST00000578692 E9PSI1 815 aa20.13■□□□□ 0.81
CRLF3-203ENST00000578692 USP17L8P0C7I0 530 aa20.13■□□□□ 0.81
CRLF3-203ENST00000578692 CTCFP49711 727 aaPredicted RBP20.13■□□□□ 0.81
CRLF3-203ENST00000578692 LMBR1LQ6UX01 489 aa20.13■□□□□ 0.81
CRLF3-203ENST00000578692 HHIPL1Q96JK4 782 aa20.13■□□□□ 0.81
CRLF3-203ENST00000578692 SRCIN1Q9C0H9 1055 aa20.13■□□□□ 0.81
CRLF3-203ENST00000578692 KCNJ4P48050 445 aa20.11■□□□□ 0.81
CRLF3-203ENST00000578692 SCARF1Q14162 830 aa20.11■□□□□ 0.81
CRLF3-203ENST00000578692 EPHA10Q5JZY3 1008 aa20.11■□□□□ 0.81
CRLF3-203ENST00000578692 STRIP1Q5VSL9 837 aa20.11■□□□□ 0.81
CRLF3-203ENST00000578692 MRPL50Q8N5N7 158 aaKnown RBP20.11■□□□□ 0.81
CRLF3-203ENST00000578692 MYOZ2Q9NPC6 264 aa20.11■□□□□ 0.81
CRLF3-203ENST00000578692 PRDM10Q9NQV6 1147 aa20.11■□□□□ 0.81
CRLF3-203ENST00000578692 ADM5C9JUS6 153 aa20.1■□□□□ 0.81
CRLF3-203ENST00000578692 MAP2K2P36507 400 aa20.1■□□□□ 0.81
CRLF3-203ENST00000578692 SLFN5Q08AF3 891 aa20.1■□□□□ 0.81
CRLF3-203ENST00000578692 CCDC57Q2TAC2 916 aa20.1■□□□□ 0.81
CRLF3-203ENST00000578692 DACT2Q5SW24 774 aa20.1■□□□□ 0.81
CRLF3-203ENST00000578692 SULF1Q8IWU6 871 aa20.1■□□□□ 0.81
CRLF3-203ENST00000578692 FBXW7Q969H0 707 aa20.1■□□□□ 0.81
CRLF3-203ENST00000578692 GGA3Q9NZ52 723 aa20.1■□□□□ 0.81
CRLF3-203ENST00000578692 ASTN2O75129 1339 aaPredicted RBP20.09■□□□□ 0.81
CRLF3-203ENST00000578692 AOC2O75106 756 aa20.09■□□□□ 0.81
CRLF3-203ENST00000578692 TAF5LO75529 589 aa20.09■□□□□ 0.81
CRLF3-203ENST00000578692 TTLL5Q6EMB2 1281 aa20.09■□□□□ 0.81
CRLF3-203ENST00000578692 HELBQ8NG08 1087 aaPredicted RBP20.09■□□□□ 0.81
CRLF3-203ENST00000578692 MXD3Q9BW11 206 aa20.09■□□□□ 0.81
CRLF3-203ENST00000578692 MYO3BQ8WXR4 1341 aa20.09■□□□□ 0.81
CRLF3-203ENST00000578692 KLRK1P26718 216 aa20.08■□□□□ 0.81
CRLF3-203ENST00000578692 LBX1P52954 281 aa20.08■□□□□ 0.81
CRLF3-203ENST00000578692 HUNKP57058 714 aa20.08■□□□□ 0.81
CRLF3-203ENST00000578692 TAF7LQ5H9L4 462 aa20.08■□□□□ 0.81
CRLF3-203ENST00000578692 ANGEL2Q5VTE6 544 aaKnown RBP20.08■□□□□ 0.81
CRLF3-203ENST00000578692 LDHAL6AQ6ZMR3 332 aa20.08■□□□□ 0.81
CRLF3-203ENST00000578692 C2orf69Q8N8R5 385 aa20.08■□□□□ 0.81
CRLF3-203ENST00000578692 ZNF594Q96JF6 807 aaPredicted RBP20.08■□□□□ 0.81
CRLF3-203ENST00000578692 BEGAINQ9BUH8 593 aa20.08■□□□□ 0.81
CRLF3-203ENST00000578692 SNAP23O00161 211 aa20.08■□□□□ 0.8
CRLF3-203ENST00000578692 OGFOD1Q8N543 542 aa20.08■□□□□ 0.8
CRLF3-203ENST00000578692 GBA2Q9HCG7 927 aaPredicted RBP20.08■□□□□ 0.8
CRLF3-203ENST00000578692 CD209Q9NNX6 404 aa20.08■□□□□ 0.8
CRLF3-203ENST00000578692 PTPRCP08575 1304 aa20.07■□□□□ 0.8
CRLF3-203ENST00000578692 NBPF7P0C2Y1 421 aaPredicted RBP20.07■□□□□ 0.8
CRLF3-203ENST00000578692 GTF2IP78347 998 aa20.07■□□□□ 0.8
CRLF3-203ENST00000578692 C15orf52Q6ZUT6 534 aaKnown RBP20.07■□□□□ 0.8
CRLF3-203ENST00000578692 SSH1Q8WYL5 1049 aa20.07■□□□□ 0.8
CRLF3-203ENST00000578692 CDCA7LQ96GN5 454 aa20.07■□□□□ 0.8
CRLF3-203ENST00000578692 PLIN1O60240 522 aa20.06■□□□□ 0.8
CRLF3-203ENST00000578692 HSPA8P11142 646 aaKnown RBP20.06■□□□□ 0.8
CRLF3-203ENST00000578692 MMP14P50281 582 aa20.06■□□□□ 0.8
CRLF3-203ENST00000578692 SUCLG2Q96I99 432 aa20.06■□□□□ 0.8
CRLF3-203ENST00000578692 CNNM1Q9NRU3 951 aa20.06■□□□□ 0.8
CRLF3-203ENST00000578692 THSD7BQ9C0I4 1608 aa20.05■□□□□ 0.8
CRLF3-203ENST00000578692 UTYO14607 1347 aa20.05■□□□□ 0.8
CRLF3-203ENST00000578692 PITPNM2Q9BZ72 1349 aa20.05■□□□□ 0.8
CRLF3-203ENST00000578692 CCER2I3L3R5 266 aa20.05■□□□□ 0.8
CRLF3-203ENST00000578692 NBPF9Q3BBW0 867 aa20.05■□□□□ 0.8
CRLF3-203ENST00000578692 CDCA5Q96FF9 252 aa20.05■□□□□ 0.8
CRLF3-203ENST00000578692 KAZALD1Q96I82 304 aa20.05■□□□□ 0.8
CRLF3-203ENST00000578692 IRS2Q9Y4H2 1338 aa20.04■□□□□ 0.8
CRLF3-203ENST00000578692 RGMBQ6NW40 437 aa20.04■□□□□ 0.8
CRLF3-203ENST00000578692 ZNF646O15015 1829 aaPredicted RBP20.04■□□□□ 0.8
CRLF3-203ENST00000578692 WNT10BO00744 389 aa20.03■□□□□ 0.8
CRLF3-203ENST00000578692 CAPN15O75808 1086 aa20.03■□□□□ 0.8
CRLF3-203ENST00000578692 NOGQ13253 232 aa20.03■□□□□ 0.8
CRLF3-203ENST00000578692 ALDH1L2Q3SY69 923 aa20.03■□□□□ 0.8
CRLF3-203ENST00000578692 KIAA0825Q8IV33 1275 aa20.03■□□□□ 0.8
CRLF3-203ENST00000578692 TRMT2AQ8IZ69 625 aaKnown RBP20.03■□□□□ 0.8
CRLF3-203ENST00000578692 HDAC9Q9UKV0 1011 aa20.03■□□□□ 0.8
CRLF3-203ENST00000578692 ZNF804AQ7Z570 1209 aa20.02■□□□□ 0.8
CRLF3-203ENST00000578692 IL1R1P14778 569 aa20.01■□□□□ 0.79
CRLF3-203ENST00000578692 BRPF1P55201 1214 aaPredicted RBP20.01■□□□□ 0.79
CRLF3-203ENST00000578692 CCDC102AQ96A19 550 aa20.01■□□□□ 0.79
CRLF3-203ENST00000578692 BICC1Q9H694 974 aaKnown RBP20.01■□□□□ 0.79
CRLF3-203ENST00000578692 SCAF8Q9UPN6 1271 aaKnown RBP20.01■□□□□ 0.79
CRLF3-203ENST00000578692 A0A1B0GUL6 1792 aa20■□□□□ 0.79
CRLF3-203ENST00000578692 ZNF157P51786 506 aaPredicted RBP20■□□□□ 0.79
CRLF3-203ENST00000578692 RABL6Q3YEC7 729 aaPredicted RBP20■□□□□ 0.79
CRLF3-203ENST00000578692 ZIC5Q96T25 663 aa20■□□□□ 0.79
CRLF3-203ENST00000578692 PUS3Q9BZE2 481 aaKnown RBP20■□□□□ 0.79
CRLF3-203ENST00000578692 FAM155AB1AL88 458 aaPredicted RBP19.99■□□□□ 0.79
CRLF3-203ENST00000578692 CA12O43570 354 aa19.99■□□□□ 0.79
CRLF3-203ENST00000578692 UBE4AQ14139 1066 aa19.99■□□□□ 0.79
CRLF3-203ENST00000578692 USP44Q9H0E7 712 aa19.99■□□□□ 0.79
CRLF3-203ENST00000578692 SMC4Q9NTJ3 1288 aa19.99■□□□□ 0.79
CRLF3-203ENST00000578692 SASH1O94885 1247 aa19.98■□□□□ 0.79
CRLF3-203ENST00000578692 FKBP1BP68106 108 aa19.98■□□□□ 0.79
CRLF3-203ENST00000578692 PRAMEF18Q5VWM3 479 aa19.98■□□□□ 0.79
CRLF3-203ENST00000578692 CERS5Q8N5B7 392 aa19.98■□□□□ 0.79
CRLF3-203ENST00000578692 TSKSQ9UJT2 592 aa19.98■□□□□ 0.79
CRLF3-203ENST00000578692 RIPOR2Q9Y4F9 1068 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms